| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,328,465 | 0 | T | G | 33.9% | 116.2 / 11.5 | 65 | T216T (ACA→ACC) | yciK | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (12/31); new base G (22/0); total (34/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.68e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CAAATGCCGCGGTGGTTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGTAATAAAGGAAGCAGT > NC_000913/1328219‑1328711 | cAAATGCCGCGGTGGTTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGttt < 1:293751/251‑1 (MQ=255) aTGCCGCGGTGGTTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATAGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGAGGGGGTTTT‑a > 1:293606/1‑250 (MQ=255) ccGCGGTGGTTTTGCCTTTTCCATTGCCGGTAACGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTTTCATCGCCCCTCAGCCAGAGGTAGAGCGGCCTGATATCAGCGGGGGTTTT‑AAGtt > 2:255737/1‑251 (MQ=255) cgGTGGTTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCt < 1:480290/251‑1 (MQ=255) tggtTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGGAGAGCGGCATGATATCAGCGGGGGTTTT‑AAGTTTTtgtg > 1:94412/1‑251 (MQ=255) tggtTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCCGTCATCTCCCCTCCGCCCGAGGGAGAGCGGCATGATATCAGCGGGGGtttttaatttttttg > 1:219892/1‑240 (MQ=255) ggtTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCtgtg < 1:304741/250‑1 (MQ=255) ttttGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCCTCAGCCAGAGGGAGATCGGCATGCTATCCACGGGGGGTTT‑TAGTTTCtgggggt > 1:110007/1‑246 (MQ=255) ccTTTTCCATTGCCGGTAAAGGCGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGGTGTCATCGCCCCTCCGCCCGAGGGAGAGGGGGCTGTTATTAGCGGGGGTGTT‑TAGTTTCttggggactttt > 2:452354/1‑240 (MQ=255) tGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCACGGGTAGAGCGGCCTGATATCAGCGGGGGGTTT‑AAGTTTTTGTGGGTCTTCGGTCGGGAAgg > 1:392994/1‑251 (MQ=255) gCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAgg < 2:127170/250‑1 (MQ=255) ggTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCt < 1:511104/251‑1 (MQ=255) gatgatAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCAt < 1:569699/251‑1 (MQ=255) gatAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGc < 1:98400/251‑1 (MQ=255) ataataCCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCCTCAGCCCGAGGTTGAGCGGCATGATATCAGCGGGTGGTTT‑AAGGTTCTGGGGGTCTTTGGTCGGGGGGGCGCCGGCCCGCCTTGCg > 2:53274/1‑251 (MQ=255) ataCCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGGGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCCCGCATTTCgggg > 1:268175/1‑249 (MQ=255) tgggcctgggccACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCCTCGCCCCTCCGCCAGAGGGAGAGGGGCATGATATTAGCGGGGGGTTT‑TAGTTTTTGTGGGTCTTCGGTCGGGGAGGGGGCGGCACGCCGTGCGGGGCGCGGACCGCCTggg > 2:131161/1‑251 (MQ=255) gggcctgggccACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTgg < 1:41214/249‑1 (MQ=255) gggccACACGAGCATCTACTTGTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGc < 2:489850/251‑1 (MQ=255) ggccACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGGCATCTCCCATCAGCCCGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑TAATTTCTGTGGATCCTCGGGCGGGAAGGCGCTGGTACGCATTGCGGGgcgggggccccccgggtgtatgcc > 2:94366/1‑230 (MQ=255) acGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGGGTTTT‑TAGTTTCTGTGGATCTTCGGTCGGGGAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGGTAATGCAGTTGac > 1:186267/1‑251 (MQ=255) cATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCa < 1:174310/251‑1 (MQ=255) cATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGGGTTTT‑TAGTTTCTGTGGATCTTCGGGCGGGGAGGCGCTGGCCCGCCTTTCGGTGCGCGTACCGCCTGGGGTAATGCAGGTGACACGc > 1:232800/1‑250 (MQ=255) tACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCCGCCCGAGGTAGAGCGGCATGATATCAGCGGGGGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGGAGGGGCTGGCACGCATTGCGGGGCGCGTACCGCCTGGGTTAATGCAGTTGAAACGCAGgcg > 1:370730/1‑251 (MQ=255) tACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTAATTGGGAACTTCATGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCCTCAGCCCGAGGTAGAGCGGCATGATATCAGCCGGGGTTTT‑AAGTTTCTGTGGGACTTCGGTAGGGGAGGGGCTGGGCCGCCTTGCCGTGCGGGTACCGCCCGGGGTTATGCCGTTGACACGCAGgcg > 1:565088/1‑251 (MQ=255) ctttcACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCCGAGGTAGAGCGGCATGGTATCAGCGGGTGTTTT‑TAGTTTTTGTGGGTATTCGGTCGGGGAAGCGCTGGCACGCACTTCGGGGCGCGGACCGCCCGGGTTAATGCCGTTGACAAGCCGGCGCCGCTGat > 2:158733/1‑251 (MQ=255) ttcACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGGAGAGCGGCATGATATCAGCGGGTGTTTT‑TAGTTTTTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTTCGGGGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCCGatat > 1:344708/1‑251 (MQ=255) aCTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACTCATTGCGGTGCGCGTACCGCCTGGGTTAATTCAGTGGACACGCAGGTGCTGCTGAGATTCa < 2:259381/251‑1 (MQ=255) gctgACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGc < 2:268175/249‑1 (MQ=255) gCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCt < 1:399895/251‑1 (MQ=255) gTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGGGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCCGGACCCGcatcct > 1:126182/1‑249 (MQ=255) aGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATcc < 1:429529/251‑1 (MQ=255) tcatcaCTCATTGGGCAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCAACAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGGAGGCGCTGGCACGCCTTGCGGGGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCGGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCg > 1:511142/1‑251 (MQ=255) tcaCTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGGGGTTT‑TAGTTTTTGTGGGTCTTCGGGCGGGGAGGGGCGGGGACGCATTGCGGGGGGCGGACCGCCTGGGGTAATGCAGGTTACACGCAGGGGCTGCTGATATTCATTCGGCCAGAACC‑GCATCATCCCTTCGGTg > 2:90309/1‑251 (MQ=255) tCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCTTCGCCCATCAGCCCGAGGTAGAGCGGCATGATAACAGCGGGTGGTTT‑AAGTTTCTGTGGATCTTCGGGCGGGAAAGGGCTGGCTCGCAATTCGGTGCGCGGACCGCCTGGGGTTATGGAATTTACACGCAGGGGCTGCTGATATTCAT‑CGGCCAGTAACTGTATCCTCCCTTCggggggc > 1:318435/1‑245 (MQ=255) cATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑Ca < 1:255737/249‑1 (MQ=255) gAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGa < 2:126182/251‑1 (MQ=255) cGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCCTGATATCAGCGGGGGTTTTTAAGTT‑CTGTGGATCTTCGGTCGGGGAGGCGCTGGCCCGCATTGCGGTGCGCGTAACGCCTGGGGTAATGCAGTTGAAACGCAGGCGCTGCTGATATTCAT‑CGGCCCGTACCCGCATCATCCCCTCGGGGG‑CAAATTTCGACGCTGC‑ATATGCAcc > 1:28389/1‑251 (MQ=255) cGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCAcc < 2:199354/251‑1 (MQ=255) ggCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCGTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCATGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTGCGGTGG‑CAAATTTCGACGCTGC‑ATATGCAccc < 2:328852/251‑1 (MQ=255) ccGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGGGGTTT‑AAGTTTCTGTGGATCTTCGGGCGGGAAGGGGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTTACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTAACTGCATCATCCCTTCGGGGG‑CAAAATTTGACGCTGG‑ATATGCACCCCa > 1:509187/1‑250 (MQ=255) ccGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCACTGCCCATCAGCCAGAGGGGGAGCGGCATGCTATCAGGGGGGGTTTT‑AAAGTTCTGTGGATCCTCGGTCGGGGAGGCGGTGGCACGCAATGCGGTGGGCGTATCTCCTGGGGTAATGCAGTTGACCCGCAGACGCTGGTGATATTAAT‑CGGCCAGGACCTGCCTCATCCCCTCGGGGG‑GCAACTTCGACCCCGC‑CTATGCACCCCac > 2:463445/1‑250 (MQ=255) cGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGt < 2:94412/251‑1 (MQ=255) gTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGGGGTTT‑AAATTTCTGTGGGTCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTTCGCGTACCGCCTGGGTTAATTCAGTTTACACCCAGGCGCTGCTGCTATTCCA‑CGGCCAGTACCTGCCTCCTCCCTTCGGGGGGCAATTTTC‑ACGCCTC‑ATATGCACCCCCGttt > 2:515294/1‑250 (MQ=255) tGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTgg < 1:111009/250‑1 (MQ=255) ggCGTCACAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGGAGAGCGGCATGATATCAGCGGGGGGTTT‑AAGGTTCTGTGGATCTTCGGGCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGGTAATGCAGTTGACACGCAGGCGCTGCTGATATTCCT‑CGGCCAGTACCTGCATCATCCCTTCGGGGG‑CAAATTTTGAcagatcgggagagcacacgtctgga > 1:149627/1‑226 (MQ=255) ggCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGAc < 2:149627/226‑1 (MQ=255) cAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTC‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTcc < 2:170450/250‑1 (MQ=255) aaaGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCt < 1:90309/251‑1 (MQ=255) tCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAACCCGAGGTAGAGCGGCATGATATCAGCGGGGGGTTT‑TAGTTTTTTTGGGTCTTCGGTCGGGGAGGCGCTGGCACGCATTGCGGCGCGCGTACCTCCGGGGGTAATTCAGGTGACACGCAGGCGCTGCTGGTATTCAT‑CCGCCCGTACCCGCATCATCCCCTCGGGGG‑GACATTTTGAAGCCGCCAT‑TTCACCCCCGTTGGCTCGTcccccgcgg > 2:413964/1‑245 (MQ=255) ccGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAAc < 2:56921/251‑1 (MQ=255) gTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCt < 2:65357/251‑1 (MQ=255) ggcggcTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTtgatga > 1:65878/1‑250 (MQ=255) gcTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTaa < 1:224061/251‑1 (MQ=255) gCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTg > 1:177606/1‑251 (MQ=255) cATCAGACAGAGGTAGAGCGGCATGATATCAGCGGGGGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAAc > 2:517688/1‑251 (MQ=255) cAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCgg < 2:264493/251‑1 (MQ=255) cAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTc > 1:348976/1‑251 (MQ=255) agGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCg > 1:455547/1‑250 (MQ=255) gTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGAtt < 2:264965/251‑1 (MQ=255) gCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGtaat < 1:257975/251‑1 (MQ=255) gCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTAGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGGCCGATTTGAGtaat > 1:431905/1‑251 (MQ=255) aTGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGtaata > 1:392522/1‑250 (MQ=255) cAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGTAATAAAGGAAGc < 1:515294/251‑1 (MQ=255) cGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGTAATAAAGGAAGCAGt < 1:327811/251‑1 (MQ=255) | CAAATGCCGCGGTGGTTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGCGGGTGTTTT‑AAGTTTCTGTGGATCTTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCTGATATTCAT‑CGGCCAGTACCTGCATCATCCCTTCGGTGG‑CAAATTTCGACGCTGC‑ATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGTAATAAAGGAAGCAGT > NC_000913/1328219‑1328711 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |