| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 377,402 | 0 | G | A | 21.2% | 126.9 / 29.1 | 67 | intergenic (+91/+133) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB |
| Reads supporting (aligned to +/- strand): ref base G (26/26); new base A (10/4); total (36/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.18e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AGCGAAGGTGAATACGCCATTATTCCCGCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTT > NC_000913/377153‑377642 | aGCGAAGGTGAATACGCCATTATTCCCGCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGc > 1:299968/1‑251 (MQ=255) cGAAGGTGAATACGCCATTATTCCCGCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGt > 1:314228/1‑251 (MQ=255) gAAGGTGAATACGCCATTATTCCCGCCAGCGTTGCCGTTAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGACGtt > 2:69646/1‑251 (MQ=255) gTGAATACGCCATTATTCCCGCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCAcg > 2:39720/1‑251 (MQ=255) gTGAATACGCCATTATTCCCGCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGACGTTTAcg > 2:107227/1‑251 (MQ=255) gTGAATACGCCATTATTCCCGACAGCGTTGCCGATAAAATTGATCAGCGCGATGCCAGCAGCATAGCGTTGCACAGCGCGCTCAGCGCAGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTAAAAGTGCCTGATGATTTGATGTGGGAAACATAGATAAGTCGTGCGCAGATGCATGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAGGTGTAGACCGGATAAGACGtttagg > 2:107229/1‑247 (MQ=255) aaTACGCCATTATTCCCGCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCAcgccg > 2:106014/1‑251 (MQ=255) cGCCATTATTCCCGCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGACGTTTACGCCGCATc < 1:296270/251‑1 (MQ=255) gCCATTATTCCCGCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGAGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGCTTTGATGTGGCAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGAAAAGACGTTTACGCCGCATcc > 2:346978/1‑251 (MQ=255) ccATTATCCCCGCCAGCGTTGCCGATAAAATTTCTCAGCGCGATGCCAGCAGTATAGTTTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TAGGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCg < 1:72600/251‑1 (MQ=255) ttattCCCGCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGACGTTTACGCCGCATCCGGc > 1:7896/1‑250 (MQ=255) gCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTgcg > 2:293009/1‑251 (MQ=255) aGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTTTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑Ca < 2:63945/251‑1 (MQ=255) cGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATg > 1:14411/1‑251 (MQ=255) gCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTgcgctgatgcct > 1:235619/1‑243 (MQ=255) aaTTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACg < 1:201376/251‑1 (MQ=255) aTTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACg < 1:167524/251‑1 (MQ=39) gCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCttt > 1:146842/1‑251 (MQ=255) cTCAGCGCGATGCCAGCAGTATAGTGTTGCCCAGCGCGCTCAGCGCCGAAGCGCAGGATGAAGACGACCCGTATGCCGCCTTCAAAGTGCCTGATGATTTGATGTGGTAAACCTAGATACGTCGCGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGTAGTGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTgcgttgctgcctgatgcgtcgctg > 2:310302/1‑229 (MQ=255) tCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGACGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGc > 1:356447/1‑234 (MQ=255) tCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTGATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCAGCCGGCAGTCGTGCGC‑CATGc < 2:356447/234‑1 (MQ=255) gCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATc < 1:219985/251‑1 (MQ=255) gCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTAATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATc < 2:244637/251‑1 (MQ=255) gTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTG‑ACGCGTCTTATCATGCCTa < 2:321941/251‑1 (MQ=37) ggtggCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCt‑t < 2:14411/247‑1 (MQ=255) gtTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑Ta < 1:92903/251‑1 (MQ=255) tGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACg > 1:1430/1‑251 (MQ=255) cgcgcTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTAGGCCGACTTCAAAGTGCCTGATGATTTGATGGGGTAAACATAGATAAGTCGTGCGCAGATTCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTATACCGGAGAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTG‑ACGCGTCTTATCATGCCTAcaaatctgtacgcga > 1:2297/1‑236 (MQ=21) gcCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGCCGCTTTGCGCGCCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCgg > 2:148301/1‑251 (MQ=255) gcCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCgg < 1:38450/251‑1 (MQ=255) gcCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTG‑ACGCGTCTTATCATGCCTAcaaatctgtacgcgaaccgtaggccg < 2:162140/251‑26 (MQ=18) cgacCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCAt < 1:313345/251‑1 (MQ=255) ccccGTATGCCGGCTTCAAAGTGCCGGATGATTGGATGTGGTAAACATGTAAAAGTCGGGCGCAGACCCCTGACGAG‑ACGCTTTGCGCTTCTTACCAG‑CCTGCCGTTT‑TATGGGTCAAGTGTGGACCGGATAAGCCTTTCACGCCCCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTGGCGCGTCTGATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATcc < 2:146063/250‑1 (MQ=255) atgccgccttgaatgggCCTTATGATTGGATGGGGTAAACATAGAAAAGTCGTGCGCAGATGCGTGA‑GCGGACGCTATGCGATTCTGATCAGGCCT‑AGGGTG‑TATGGGCGAAGGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCGGTCGGGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGGGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAg < 2:299968/234‑1 (MQ=21) gCCGACTTCAAAGTGCCTGATGATTTGAGGTGGAAAACATAGATAAGTCGTGCGCCGATGCCGGGTGGG‑ACGCTATGCGCGTCTTATAGGGCCA‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTc < 2:146842/250‑1 (MQ=37) ttCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTG‑ACGCGTCTTATCATGCCTACAAATCTGTACG‑‑CGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCgacctgaaaattc > 1:302673/1‑239 (MQ=2) tcaaagggccgtagtatTTGATGTGGTAAAAATAGAGAAGTCGTGCTCAGATGCGTGATGGG‑GCGCTAGGCGTGTTTTAGC‑GGCGA‑CCCGTTGTATGGGTGATGTGTAGGCGGGTTATGGCTTTCACGCCGCTTCCGGCAGGCGTGCGC‑CATGCCTGATGCGACTCTTTGCGCGTCTTATCAGGCCTACG‑‑GTT‑TGCGGGCGATGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCtat < 2:318879/235‑1 (MQ=12) gaggtgGTAAACATAGAAAAGTCGTGCGCAGAAGCCGGATGCG‑AGGCGATGCGCGTGTTATAGGGCCT‑ACGGTT‑TCTGGGCGAAGGGTAGCCGGGAAAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGttt < 2:90703/248‑1 (MQ=25) tgGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGAGACGCTTTTCGCGTCTTATCAGGCCTAAG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCCCGCCGCATACAGCAGGCGTGCTATTATCAACGCATATTCAGtttcttt > 2:126145/1‑247 (MQ=37) tAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCGATGCGCGTCTTATCAGGCTT‑ACGGTT‑TAGTGGCGAGGTGTAGACCGGATAAGGCGGTCACGCCGCAGCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCGTCCGGCAGTCGTGCTATTATCAACGCat < 1:313568/229‑1 (MQ=255) tAGATAAGTCGTGCGAAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGAGTAGGCCGGATAAGGCGTTCACGCCGCCTCCGGCAGTCGTGCTATTATCAACGCat > 2:313568/1‑229 (MQ=255) tAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGACGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCa > 2:39348/1‑250 (MQ=255) tAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCa > 1:360675/1‑250 (MQ=255) gTCGTGCGCAGATGCCTGATGCG‑GCGCTAGGAGCGTCTTATCAGGCCA‑ACGGTT‑TATGGGCGAAGTGTAGACGGGATAAGGCGTTCACGCCTCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAatat < 2:320303/251‑1 (MQ=255) gcAGATGCCTGATGAG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCAACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGCGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGccattttatcgcc > 2:52447/1‑239 (MQ=255) gATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAAt < 1:106014/251‑1 (MQ=255) cTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGTCGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTAGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCGATaaaa > 2:74713/1‑250 (MQ=255) aTGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTgg > 1:250905/1‑251 (MQ=255) ggCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGga < 2:1430/250‑1 (MQ=255) g‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGAc > 1:188847/1‑251 (MQ=255) aCGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACa < 1:74592/251‑1 (MQ=255) ggtgaggggcgtgtgagcgggCCT‑AGGGTT‑TAGGGGGGAAGGGTAGACGGGATAAGGGGTTCACGCCGCATCCGGCGGTGGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGTGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACac < 2:106780/232‑2 (MQ=37) cTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACaaa > 1:317852/1‑250 (MQ=255) tGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCACGCCAATAAAACTGGAGACAAaata > 1:212346/1‑250 (MQ=255) aGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCAt < 1:292889/251‑1 (MQ=255) cT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAAcc > 1:29583/1‑251 (MQ=255) agggTT‑TATGGGCAAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCt < 2:263111/249‑1 (MQ=255) cGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTc < 1:223884/251‑1 (MQ=255) gTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTTCG‑‑GCT‑TACGGGCGAAGTGTCGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTGGTGCTATTATCAACGCATATTCAGCTTATTGGCGTGGGAGGAAAGATGCTCGCCAATAAAACTGGAGACAAAATAATAACTGTGATGATaaacatcg > 2:241789/1‑244 (MQ=38) gTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGt > 1:50468/1‑251 (MQ=255) tATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGa > 1:2851/1‑250 (MQ=255) tATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGAt > 1:143866/1‑251 (MQ=255) tgtAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAAc > 1:308340/1‑251 (MQ=255) gtAGACCGGCTAAGGCGTTCACGCCGCATCCGGCGGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACg < 1:10546/251‑1 (MQ=255) aGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATTGCTGTGATCATAACCCTCGTGATAACGGATTAACGt < 2:314228/250‑1 (MQ=255) aGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTc > 1:151692/1‑251 (MQ=255) aCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCtt < 2:360675/251‑1 (MQ=255) | AGCGAAGGTGAATACGCCATTATTCCCGCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCG‑ACGCTATGCGCGTCTTATCAGGCCT‑ACGGTT‑TATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGC‑CATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACG‑‑GCT‑TACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTT > NC_000913/377153‑377642 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |