| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 553,161 | G→A | intergenic (‑61/+57) | purE ← / ← lpxH | N(5)‑carboxyaminoimidazole ribonucleotide mutase/UDP‑2,3‑diacylglucosamine diphosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 553,161 | 0 | G | A | 98.5% | 217.9 / ‑4.5 | 66 | intergenic (‑61/+57) | purE/lpxH | N(5)‑carboxyaminoimidazole ribonucleotide mutase/UDP‑2,3‑diacylglucosamine diphosphatase |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (30/35); total (31/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
ATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAACAGTTTATCGGGGGTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGGAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGTGGATCAGCCATTGCACCTGATGTTTTTCCATCGCAC > NC_000913/552912‑553399 | aTAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAACAGTTTATCGGGGGTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGTTGCACAAATCTCGGCTTTAGAGGGCACAGAGACTAGCACgg > 2:28044/1‑250 (MQ=255) ctctTCGGCGCTTTCGGCGAGGCTGAACAGTTTATCGGGGGCGCGGTGCGCAGAAACCGCTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGACGGCGACACGCGCCGGATTATTGCGGGACGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGCGAGc > 2:98599/1‑250 (MQ=255) ctctTCGGCGCTTTCGGCGAAGCTGAACAGTTTATCGGGGGTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGc > 1:560717/1‑250 (MQ=255) tctTCGGCGCTTTCGGCGAAGCTGAACAGTTTATCGGGGGTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCa > 1:164916/1‑250 (MQ=255) ggCGCTTTCGGCGAAGCTGAACAGTTTATCGGGGGTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGaaa < 2:436469/251‑1 (MQ=255) cgcTTTCGGCGAAGCTGAACAGTTTATCGGGGGTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAAc > 1:349254/1‑251 (MQ=255) ttCGGCGAAGCTGAACAGTTTATCGGGGGTGCGGTGAGCAGAAACCACTTCATCGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTTCATGGTAGCCCATTCGCTTTTGGACCCCATCACGATGTCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTTGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGt < 1:382369/250‑1 (MQ=255) gggCGAAGCTGGACAGTTTAACGGGGGTGCGGTGAGTGGAAACCACTTCAACGTGGTTCGGGGGAGTGAGGATTTCGAAGATTTCGGCGGCAAACTGCATGGTAGCTCAGTCGCTTGCGGACTCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGGCATGCGTCTTAAAACTCCGGGGGTGCACAACTCGCGGCTTTAGAGGGCACAGATACAAGCACGAAAAGAGAGCAAGGAAAACGGTTGc < 2:439015/250‑1 (MQ=255) aaCAGTTTATCGGGGGTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGaa < 1:311183/251‑1 (MQ=255) aCAGTGTATCGGGGGTGCGGTGCGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCGTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGaaa < 2:268027/251‑1 (MQ=255) tATCGGGGGTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGc > 1:333947/1‑250 (MQ=255) cGGGGGTGCGGTGAGCAGAAACCACTGCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCaaa < 2:402363/250‑1 (MQ=255) gggggTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGt > 2:482384/1‑251 (MQ=255) gggggTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGt < 2:315885/251‑1 (MQ=255) ggggTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGAAAAGtt > 2:424278/1‑251 (MQ=255) ggggTGCGGGGAGCAGAAACCACTTCAACGTGGTTCGTGACATTCAGGATTTGGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGAACCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGtt < 1:479103/251‑1 (MQ=255) gTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCg > 1:510434/1‑251 (MQ=255) gTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCg < 2:52594/251‑1 (MQ=255) ggggAGCAGAAACCACCTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGtt < 2:360731/248‑1 (MQ=255) gagAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTAGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGAGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAACAGGGAGCAAGGAAAACGGTTGCGTGGCTGGGAAATCAGCAAAGTTGGGGGttt > 2:579002/3‑251 (MQ=255) gAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGtttt < 1:44925/250‑1 (MQ=255) aGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGtttttt < 1:514241/251‑1 (MQ=255) gCAGAAACCACTTCAACGTGGTGCGGGCCATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACGCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTa < 2:384947/251‑1 (MQ=255) tCAACGTGGTGCTGTACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAAt < 1:206902/250‑1 (MQ=255) tCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGaaaa < 1:141636/249‑1 (MQ=255) cAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATg < 1:531543/250‑1 (MQ=255) cAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGGTTTTTAAAACGGAAAATg > 2:427056/1‑250 (MQ=255) tgCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTc > 1:109691/1‑251 (MQ=255) gACATTAAGGATATCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGAGCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAAGGACTAGCACGAAAAGAGAGCAAGGCAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGt > 2:278008/1‑251 (MQ=255) agtCAGGATTTCGAAGATTGCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCATGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCAt < 1:506669/249‑1 (MQ=255) ttCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTg > 1:357115/1‑250 (MQ=255) cggcggCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCAtt > 2:446432/1‑251 (MQ=255) gggggggAACTGCATGGTAGCCCAGACGTTTTTGGACCCCATCACGATGGCGACCCGGGCCGGATTTTTGGGGGAAAACAGGCGGCTTAAAACCCCGGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAACCGGTGGCGTGGCTGGGAAAGCAGCAAATTTGCGGGTTTTTTAAAACGGAAAATGAAACAGCTCAACGTCATCCGCCGTGACTTTCACCATTg < 2:346846/245‑1 (MQ=255) aCTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGCACCTTcc > 1:340102/1‑251 (MQ=255) cTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCg > 1:473855/1‑251 (MQ=255) cATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCAAAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTAt > 1:357888/1‑251 (MQ=255) ggTAGCCCAGTCGCTTTTGGACCCCATCCCGAGGGCTACCGGCGACGAATTTTTGGGGGAAGACATGCGTCTAAAAACTCCTGGGGTGCACAACTCTCGGCTTGAGAGGGCAAAGAGAATAGAACGAAAAGAGAGCAAGGAAAACGGTGGCGGGGCTGTGAAATCAGCAAAGTGGCGGTTTTTTTAAAACGGAAAATGATCCATCTCACCGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGcc < 2:125829/251‑1 (MQ=255) ggTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGCCATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGcc > 2:161337/1‑251 (MQ=255) gTAGCCCAGGCGCTTTTGGACCCCAACAGGATGGCGACACGCGCCGGATTATTGCGGAAAGACATGCGCCTTAAAACTCCTGTGGGGCACAACTCTCGGCTTTAGAGGGCACAGGAAATAGCACGAAAAGAGAGCAAGAAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGATTCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCa < 1:446432/251‑1 (MQ=255) cGCTTTTGGACCCCATCTCGATGGCCACATGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACCTCTGTGGTGCAAAATTCGCGGTTTTAGAGGTCACAGAGAATAGCACGAAAAGAGAGAAAGGAAACCGTTTGCGTGGCGTTGAAATCAGTAATGTGGCGGGTTTTTTAAAACGGAAAATGAATCAGTTAAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAg < 1:508635/250‑1 (MQ=255) tGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCAc < 1:482384/250‑1 (MQ=255) aaCCCCATCCCGATGGCGACACGCGCCGTATTATTGCGGGAAGAAATGCGCCTTAAAACCCCTGTGGTGCACACCTCGCGGCTTTAGAGGGCACAGAGAATAGCAGGAAAAGAGAGCAAGGAAAACGGTTGCGTGGTTGTGAAAGCAGCAAAGTTGGGGGTTTTTTAAACCGGAAAATGAATCAGCTCAACGCCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCAcgcg < 2:228914/250‑1 (MQ=255) gCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGGGGTGCACAACTCTCGGTTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTg < 1:487997/251‑1 (MQ=255) gACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCGCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGAt < 1:490963/251‑1 (MQ=255) acacGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAAt > 1:403647/1‑160 (MQ=255) acacGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAAt < 2:403647/160‑1 (MQ=255) ccGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAAAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTAAAAACGGAAAATGAATCAGCTCACCGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATa < 1:391688/251‑1 (MQ=255) gCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAg < 1:430051/118‑1 (MQ=255) gCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAg > 2:430051/1‑118 (MQ=255) gggAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACAGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCAcc > 2:51071/1‑251 (MQ=255) cTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCa < 1:119330/138‑1 (MQ=255) cTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCa > 2:119330/1‑138 (MQ=255) aaaaCTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTT‑AAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGAGGGGTATGc > 2:78992/1‑251 (MQ=255) aaCTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTg < 1:74996/214‑1 (MQ=255) aaCTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTg > 2:74996/1‑214 (MQ=255) tCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGt > 1:311285/1‑251 (MQ=255) ccgggggggcacaccgttcGGTTTTAGAGGGAACAGAGAATAGCAAGAAAAGAGAGCAAGGAAAACGGTGGCGTGGCTGTGAAATCAGAAAAGTTGCGGGTTTTTTAAAACGGAAAATGAACCAGCAAAACGTCATCCGCCGTGACTTTCACCATTGACCCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGTg < 2:420200/234‑1 (MQ=255) ggggtgCACAACTCCCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTGGCGTGGCTGTGAAATCAGCAAAGTTGGGGGTTTTTTAAAACGGAAAATGAATCAGCCCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGTGGAt < 1:177973/249‑1 (MQ=255) ggaccaattctcGGCTTTAGGGGGCACAAAAAATAGCACAAAAAGAGAGAAAGGAAAACGGTTGCGGGGCTTTGAAATCAGCAAAGTTTGGGGTTTTTTAAAACGGAAAAGGAATCACCTCAGCCTCTTCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGTGGATCAGc < 1:425877/243‑1 (MQ=255) gcccacctcgcGGCTTTAGAGGGCAAAGCGAATAGATAGAAAAGAAAGCAAGGAAAACGGTTGCGTGGTTGTAAAATCAAAAAAGTGGCGGGTTTTTTAAAACGGAAAATGAATCAGCTAAACGTCTTCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGTGGATCAGcc < 1:557371/241‑1 (MQ=255) aaCTCTCGGCTTTAGAGGGCACAGAGAATAGCACAAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAACGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGTGGATCAGCCATTg > 1:67933/1‑251 (MQ=255) ctctCGGCTTTAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGTGGATCAGCCATTGc > 2:446179/1‑250 (MQ=255) tAGAGGGCACAGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGTGGATCAGCACTTGCACCTGATGttt > 2:428193/1‑251 (MQ=255) cacaGAGAATAGCACGGAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAAACTTCCGTATGCCAGGCACCCAGTACCACGCGTAAAGCAGGATGCTGATTGGCGAAAAGGTACTGCACAGCCGGCAGATGGGAATGCCAGTGGGTCAGCAATTGCACACGCGGTTTTTCCATc > 2:144751/1‑251 (MQ=255) caGAGAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGCAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGTGGATCAGCCATTGCACCTGATGTTTTTCCATCGc > 2:94203/1‑251 (MQ=255) agagAATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGTGGATCAGCCATTGCACCTGATGTTTTTCCATCga > 2:417236/1‑249 (MQ=255) aagaATAGCACGAAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGTTTTTTTAAAACAGAAAATGAATCAGCTCACCGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGTGGATCAGCCATTGCACCTGATGTTTTTCCATCGCAc < 1:51071/250‑1 (MQ=255) | ATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAACAGTTTATCGGGGGTGCGGTGAGCAGAAACCACTTCAACGTGGTGCGGGACATTCAGGATTTCGAAGATTTCGGCGGCGAACTGCATGGTAGCCCAGTCGCTTTTGGACCCCATCACGATGGCGACACGCGCCGGATTATTGCGGGAAGACATGCGTCTTAAAACTCCTGTGGTGCACAACTCTCGGCTTTAGAGGGCACAGAGAATAGCACGGAAAGAGAGCAAGGAAAACGGTTGCGTGGCTGTGAAATCAGCAAAGTTGCGGGTTTTTTAAAACGGAAAATGAATCAGCTCAACGTCATCCGCCGTGACTTTCACCATTGAACCTTCCGTATGCCAGGCACCCAGTACCACGCGAAAAGCAGGTTGCTGATTGGCGATAAGTTCATGCACCGCCGGGCGATGGGTATGCCCGTGGATCAGCCATTGCACCTGATGTTTTTCCATCGCAC > NC_000913/552912‑553399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |