| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 89,699 | T→C | Y22Y (TAT→TAC) | mraZ → | DNA‑binding transcriptional repressor MraZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 89,699 | 0 | T | C | 98.2% | 199.4 / ‑6.0 | 57 | Y22Y (TAT→TAC) | mraZ | DNA‑binding transcriptional repressor MraZ |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (33/23); minor base A (1/0); total (34/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
CATAACGTTAATTTGCTTCGCACGTTGGACGTAAAATAAACAACGCTGATATTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCAGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTATCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTTATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGATGGCGCAGGTCGATTGTTAATCGCGCCAGTACTGCGGCAACATGCCG > NC_000913/89454‑89940 | cATAACGTTAATTTGCTGCGCACGTTGGACGTAAAATAAACAACGCTGATATTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCggg > 1:380029/1‑250 (MQ=255) aTAACGTTAATTTGCTGCGCAAGTTGGACGTAAAATAAAAAACGCTGAGATTAGCCGTAAACATTGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTGGACAAGATTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTGCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGaa < 2:421785/251‑1 (MQ=255) aaCGTTAATTTGCTGCGCACGTTGGACGTAAAATAAACAACGCTGATATTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAAc < 1:207538/250‑1 (MQ=255) gTTAATTTGCTGCGCACGTTGGACGTAAAATAAACAACGCTGATATTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAgct > 1:467289/1‑251 (MQ=255) ttAATTTGCTGCGCACGTTGGACGTAAAATAAACAACGCTGATATTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGGGGGAATAAGGGGTGAGGATGGCCAGGTACCGGG‑AGCAACGGTAGGCAATCTCGCAAGCAACGGGCGGTTATCCATGTCTACCC‑GTTACCGGGAACAgcgg > 2:222934/1‑249 (MQ=255) aTTTGCTGCGCACGTTGGACGTAAAATAAACAACGCTGATATTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCtt > 1:448887/1‑251 (MQ=255) gcGCACGTTGGACGTAAAATAAACAACGCTGATATTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAATCTTTTCCTTCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAAc < 1:90189/249‑1 (MQ=255) ttGGACGTAAAATAAACAACGCTGATATTAGCCGTAACCATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCCAAGTGGGAATAAGGGCTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCACCCC‑GTTACCGGGCAAAGCGGCTTGGGAACGCTGCCgg > 2:28254/1‑251 (MQ=255) tGGACGTAAAATAAACAACGCTGATATTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAACTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGCGAACCGCTGCTTGAGAACCCTGCCGGt > 2:390942/1‑251 (MQ=255) aaaaTAAACAACGCTGATATTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATg < 1:361702/250‑1 (MQ=255) aaaCAACGCTGATATTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTg < 1:331827/250‑1 (MQ=255) gATATTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGCATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGGGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGAc > 1:542389/1‑250 (MQ=255) tatTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTTTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAGTTGTGAGGCAAGGTGGGAATAAGGGGTTAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCACTCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTCCCGGGCACAGATGCTTGAGACAGCTGCCAGTCAAATGGCTTGCCCCATTGACAtt > 2:89352/1‑251 (MQ=255) atTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACAtt < 1:79696/250‑1 (MQ=255) ccGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCAc > 1:484140/1‑251 (MQ=255) gTAAACATCGTGTTGTTTACCTCGGTAGGCCTTGGGACTGGCTTGCTAAGCGTTTCCTCCGCTCCGTAAACTCCGTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGTAAAGTGCGCTTATCAGGGCCTACCC‑GTTTCCGGGAACAGCTGTTTGAGAACGCCGCAGGTCAAAGGGTTTGCACCATTGACATTCATAAccc < 2:31424/251‑1 (MQ=255) gTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCAccc < 1:525989/251‑1 (MQ=255) aCATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCCACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGGGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATccaccgttc > 2:316991/1‑243 (MQ=255) cGGGTTTTTTACCTCGGTATGCCTTGAGACTGGCTTGACAAGCTTTTCCTCCGCACCGTAAACTCCCTTCCGTGGGCAATTGTGGGCCAAAGAGAGAACAAGGGGTGACGCTGGC‑ATGTTCCGGCGAGCAACGGTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTCCCTACCC‑GTTACCGGTAACAGCTGCTTGCGAACGCTGCCCGTCCAATGTATTGCACCCTTGACATTCCTCACCCGTGCctgc > 1:552882/1‑251 (MQ=255) cTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATATCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATGCATCACCCGTGCCTGCTGCTTTAccccc > 1:213481/1‑251 (MQ=255) ggTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTTCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCcctgc > 2:283320/1‑251 (MQ=255) ggCTTGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTAt < 2:448887/251‑1 (MQ=255) tGACAAGCTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCg < 1:91977/249‑1 (MQ=255) tGACAAGCTTTTCCTCCGATCCGTAAACTAACTTCCGTGGGACATTGTGGCGCACAGTGGGAATACGGGGACAGGCTGGC‑ATGTTCCGGGGAGCAACGCTAGTCACTCTCGCCAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTAACGGGAACAGCTGCTTGAGAACGCTTCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGGTTGGGAAATTATCgtg > 2:246295/1‑249 (MQ=255) cTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCACATGGTTTGCa > 1:298039/1‑182 (MQ=255) cTTTTCCTCCGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCa < 2:298039/182‑1 (MQ=255) gTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCgg > 1:32889/1‑250 (MQ=255) tAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCg > 1:564597/1‑249 (MQ=255) aCTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCAt > 1:375311/1‑251 (MQ=255) tCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATg > 1:295708/1‑250 (MQ=255) tGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATc > 1:150239/1‑167 (MQ=255) tGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATc < 2:150239/167‑1 (MQ=255) gAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGATAGTCAATCTCGACAGCAAAGGGCGCTTAGCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAgc < 2:127325/251‑1 (MQ=255) aatggtgGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGGCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGt < 2:499859/224‑1 (MQ=255) aaTTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGt > 1:499859/1‑228 (MQ=255) aaGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAg > 1:277591/1‑197 (MQ=255) aaGTGGGAAGAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACAGTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAg < 2:277591/197‑1 (MQ=255) gggggAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGGCAAACTCGACAGCAAAGGGCGCTGATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGTTTGAGCGCCGTGTGCAGCGCCt < 2:378418/249‑1 (MQ=255) gagggAATCAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGCCAAATGGTTTGAACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCt > 2:496423/3‑251 (MQ=255) ggAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACt < 1:395884/251‑1 (MQ=255) gAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTg > 1:313094/1‑251 (MQ=255) gAATAAGGGGCGAAGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCACAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGACCGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAACAATTATCACGTCTTTCGAGCATGAACCCGGTTGTGCGCCGTGTGCAGCGCCTACTg > 2:258258/1‑251 (MQ=255) ggTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAAAAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGGGCAGCGCCTACTGTTAGGTc > 2:33501/1‑250 (MQ=255) gCTGGC‑ATGTGCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAg < 2:564597/251‑1 (MQ=255) tGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCg > 1:422440/1‑251 (MQ=255) tGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGt > 1:207329/1‑251 (MQ=255) gAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAgatggat > 1:112201/1‑251 (MQ=255) aGTCAAGCGCGACAGCAAAGGGCGCTTATCAGTGCCTTCCC‑GTTACAGGGAACAGCTGCTTTAGAACGCTGCCGGGCAAATGGTTTGCACCATTGACATTCAGCACCCGTGCCTGCTGCTTTACCCCCTGCCTTAATGGGAAATTAGCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTTTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGATTTCGCAGGTc < 2:88548/251‑1 (MQ=255) gccAATCTCGACAGCAAAGGGCGCTTAACTGTGTCTACCCTGTT‑CCTGGAACAGCTGCTTGAGAACGCTTCCGGTCAAATGGATTGCACCATTGACATTCATCACCCGTGCCTGCTGGTTTACCCCCTGCCGGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGATGGCGCAGGTCg < 2:479848/249‑1 (MQ=255) cAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAACAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTATTAGGTCATGCCAGCGAATGTCAGATGGATGGCGCAGGTCGAt > 2:233097/1‑251 (MQ=255) ctcGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGCGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGTTGGCGCCGGTCGATTGtt > 2:426496/1‑251 (MQ=255) aCAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTACTGCTTTACCCCCTGCCTGAATGGAAAATTATCGCGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGATGGCGCAGGTCGATTGTTAATc > 1:460132/1‑251 (MQ=255) gcTTATCAGTGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGATGGCGCAGGTCGATTGTTAATCGCGCCAGTACTg < 1:390942/251‑1 (MQ=255) ttATCAGTGCCTACCC‑GTTACCGGGACCAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCTTGCCTGAATGGGAAATTATCGAGCACAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGATTGTCAGATGGATGGCGCAGGTCGATTGGTAATCGCGCAAGTACTGCg > 2:425987/1‑251 (MQ=255) tGCCTACCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGATGGCGCAGGTCGATTGTTAATCGCGCCAGTACTGCGGCAACAt > 1:330600/1‑251 (MQ=255) cccc‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGATGGCGCAGGTCGATTGTTAATCGCGCCAGTACTGCGGCAACATGcc < 2:380029/248‑1 (MQ=255) aCCC‑GTTACCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTCATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGATGGCGCAGGTCGATTGTTAATCGCGCCAGTACTGCGGCAACATGCCg < 2:482500/250‑1 (MQ=255) | CATAACGTTAATTTGCTTCGCACGTTGGACGTAAAATAAACAACGCTGATATTAGCCGTAAACATCGGGTTTTTTACCTCGGTATGCCTTGTGACTGGCTTGACAAGCTTTTCCTCAGCTCCGTAAACTCCTTTCAGTGGGAAATTGTGGGGCAAAGTGGGAATAAGGGGTGAGGCTGGC‑ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCC‑GTTATCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTTATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGATGGCGCAGGTCGATTGTTAATCGCGCCAGTACTGCGGCAACATGCCG > NC_000913/89454‑89940 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |