| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,548,925 | 0 | A | C | 32.1% | 73.2 / 11.1 | 57 | G382G (GGT→GGG) | malQ | 4‑alpha‑glucanotransferase |
| Reads supporting (aligned to +/- strand): ref base A (23/15); new base C (8/10); total (31/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCCGTCTCGCCATACGGTATCCACCACAAACGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGATACATCTCTGGCCATGCAGGCCAGCCCCAGCGCATTTCGTCCTCTTTCACTTGCTGGGCATGTA > NC_000913/3548677‑3549169 | gCCGTCTCGCCATACGGTATCCACCACAAACGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCCA‑CCGG‑GC‑GGGGATAGCCGCCGGCGCGCCCACCCCTGCTTT‑CAGGAGAAATAGTTCACGGTTCCACCAGGTTTCC‑CCCCCAcc > 2:106929/1‑251 (MQ=255) cGCCATACGGTATCCACCACAAACGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAAACCCCAGTTCTGCCCCAA‑CCGG‑CC‑GCGGATATCCGGCGGCGCGCCAACCGCTGCTTT‑CCGGCAATATAGTTCACGGTCACATCAGGGTTCC‑GCCCCACC‑TTCCGCt > 1:235684/1‑251 (MQ=255) caccacAAACGCAGCACCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAACCGGTTCATAGGCCCGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAg < 1:209986/251‑1 (MQ=255) caAACGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCAc < 1:410052/251‑1 (MQ=255) aaactcagcaccgtaaacacaTGGTACATACGTAATGCGCCGAAGTTTTGCATA‑TTGGCACGCACCAGCGCGATAAACGGTTCATATGCACGCGCGG‑GGATGATATGCGGGTCCATTGGCGTTAACCCCCAGTTCTGCCCCAC‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGAAATATAGTCCACGGTCACACCAGGTTGCC‑GCCCCACC‑TCCCGCTACGCCAACCGCCAGATCACg < 2:92474/234‑1 (MQ=255) agcaTCGACATCACATTGTCAATTCTAAAGGCCCCGCAGTTTTGCATA‑GTGGCACGCAACAGCTCGAAAACCGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATGGGCGGTAATCCCCAGTTCTGCCCCAC‑CGGG‑CC‑GAGGATACCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGTTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACaa < 2:552780/251‑1 (MQ=255) agcaTCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCCGTTCTGCCCCAA‑CCGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CCGGCAATATAGTTCACGGTCCCACCAGGTTTCC‑GCCCCCCC‑CTCCGCTCCGCCAACCGccccgtcccgataca > 2:109179/1‑237 (MQ=255) agcaTCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGGTATCCGGCGGCGCGCCAACCGATGATTT‑CCGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCAAC‑TTCCGCTACGCCAACCGCCAGAACACGATACa > 1:448824/1‑250 (MQ=255) agcaTCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACaa < 1:109179/251‑1 (MQ=255) gcaTCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCCCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAg < 1:523722/251‑1 (MQ=255) gacacacaaTGGTAAATTGGTAATGCGC‑GCAGTTTTTCATAATGGGCACGAAACAGCTAGATAAACGTTTCATGGTCAGGCGCGG‑TGATGATTGGCGGTTCCATTGGCGGAAACCCCCAGTTC‑GCCCCCA‑CGGGGCG‑GAGGATATCCGGGGGCGCGCCACCCGATGTTTT‑CAGCAAATATAGTTCACGTTCACCCCAGTTTTCC‑CCCCCCCC‑TCCCCCTCCCCCAACCGCCAGATCACGATACAAGCCAAt < 1:279192/243‑1 (MQ=255) gACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCCCC‑TTCCCCTACGCCAACCCCCAGATCACGATACAAACCaa > 1:89089/1‑250 (MQ=255) tCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGGTATCCGGCGGCGCGCCCACCGATGCTTT‑CAGGCAATATAGTTTACGGTCACCCCAGGTTTCC‑GCCCCACC‑TTCCGCTACCCCCACCGCCAAGTCACGATACAAGCCAATCGGc > 1:534330/1‑251 (MQ=255) cacaTGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCCGTTCTGCCCCCA‑CGGG‑CC‑GAGGGTATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTTCCGGTCACACCCGGGTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGAACACGATACAAACCAATCGGc > 1:504535/1‑250 (MQ=255) acaTGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGGAATCCCCCGTTCTGCCCCAA‑CGGG‑CC‑GGGGGTATCCGGCGGCGCGCCCACCGATGCTTT‑CAGGCCATATAAGTCACAGTCACACCCGGGTTCC‑GCCCCCCC‑CTCCGCTCAGCCAACCCCCAGATCACACTACAAGCCCAACGGCAt > 2:171691/1‑251 (MQ=255) ggTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCTATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGGAATATAATTTACGGTCACACCCGGTTTCC‑GCCCCACC‑TTCCGCGTCACCAAACGCCCGATCACGATACAAGCCAAACGGCACTTc > 1:61028/1‑250 (MQ=255) cAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCAAAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATa < 1:317179/250‑1 (MQ=255) tAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TCCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCGTAGCCCTgg < 1:171691/250‑1 (MQ=255) aTGCCCCGCAGTTTGGCATA‑TTGGCACGCAACAGCTCGATAAACTGGTCATAGCCACGCGCGG‑TGATGATAGGTGGGGCCATTGGCGGTAATCCCCAGTCCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCACCCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCTCC‑TTCCGCTACGCCATCCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCtt < 1:201527/251‑1 (MQ=255) gcgcCGCATTTTTGCATA‑TGGGCACGCAACAGCTCGATAAACGGTCCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CG‑GAGGATATCCGGCGGCGCGCCACCCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCCCC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTAt < 2:465683/251‑1 (MQ=255) cccAGTTTTGCATC‑TTGGCACGCAACAGCTCGATAATCGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTcc < 1:500300/249‑1 (MQ=255) gcattttggaatattgtcccgaaaCAGCGCGATAAACGGTTAATAGGCACGCGCGG‑TGAGGATATGCGGGTCCATGGGCGGTATCCCCCAGTTCGGCCCCA‑‑CGGG‑CCCGAGGATATCCGGCGGCGCGCCAACCGCTGCTTT‑CAGGCAATATATTTCACGGTCACACCAGGTTCCC‑GCCCCCCC‑TTCCGCTCCGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTccc < 2:407295/229‑1 (MQ=255) cAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCCATATAGTTCACGGTCACACCAGGTTTCC‑TCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGAAACAAGCCAATAGGCATTTCCAAGCCCTGGCTTATCTccc > 1:412286/1‑250 (MQ=255) aGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGAAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GGGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCCCCGTGCCAACAGGTTTCC‑GCCCCCCC‑TTCCGCTACGCCAACCCCCAGATCACGATACAAACCAATCAGCATTTCCTAGCCCTGGCTTATCTCCcac > 2:73613/1‑250 (MQ=255) tGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCCACCGATGCTTT‑CCGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCCTAGCCCTGGCTTATCTCCCCGCAggc > 1:21479/1‑251 (MQ=255) gCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCCA‑CGGG‑CC‑GGGGGTATCCGGCGGCGCGCCCACCGCTGGTTT‑CAGGCCATATATTTCACGGTCACACCCGGTTTTC‑CCCCCCCC‑CTCCGCCACCCCCACCGCCACATCCCGATACAATCCCATCCGCCTTTCATATCCCTGGCTTTTCCCCcagcaaggc > 2:179521/1‑247 (MQ=255) gcatttgggCACGAAACATCCCGATAAACGGTTCAGAGGCACCCGCGG‑TGAGGATATACGGGTCAATGGGCGGTAATCCCCAGTTCGGCCCCAA‑CGGA‑CC‑GAGGATATCCGGCGGCGCGCCACCCGATGCTTT‑CAGGAAATATAGTCCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAggcg < 1:154625/244‑1 (MQ=255) ttGGCACGCAACAGCTCGATAAACGGTTCATAGGCCCGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCaa < 1:290333/250‑1 (MQ=255) gcccgcacccgCTCGACAACCGGTTCATAGGCACG‑GCGGGTGAGGATATGGGGGTCCATGGGCGGTAATCCCCATTACTGCCCCAA‑CGGG‑CC‑GGGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGAAATATAGTCCACGGTCACACCAGGTTCCC‑CCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTg < 2:496167/241‑1 (MQ=255) gtCGATAAACGGTGCATAGGCACGCGCGG‑TGAGGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCCCC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAagcca < 1:264643/250‑1 (MQ=255) aTAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAAACCCCAGGTCTGCCCCAAACGGG‑C‑‑GAGGATATCCGGCGGCGCGCCCACCGATGCTTT‑CAGGCAATCTAAGTCACGGGCCCACCCGGTTTTC‑GCCCCCCC‑TTCCCCTACGCCCCCCGCCACATCCCGATACAAACCCATCTGCATTTTATAACCCTGGGTTATCTCCCCGCACGCGGCCCACTAGCTGTAagaccgccc > 2:350091/1‑244 (MQ=255) aTAAACGGTTCATAGGCACGCGCGG‑TGAGGATATGCGGGTCCATTGGCGGTAACCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAgccagcca < 1:344032/251‑1 (MQ=255) tAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCCGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCCCACCCGGTTTCC‑GCCCCCCC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAACCCATCGGCCTTTCCTAGCCCTGGCTTATCTCCCAGCAGGCGGCCAACCGGCTGTAagccagcccc > 2:251073/1‑249 (MQ=255) aCGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGc > 1:296963/1‑251 (MQ=255) tAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCCACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCCGATCACGATACAAACCAATCGGCATTTCATAGCCCTGGCTTTTCTCCCAGCAGGCGGCAAACTGGCTGTAAACCAGCCCCTGCaaacca > 1:62578/1‑245 (MQ=255) cgcgcgG‑TGATGATAGGCGGGTCAATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCCCC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATaaaa < 1:60310/251‑1 (MQ=255) cgcgG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCCCC‑TTCCGCTCCGCCCACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCCAACTGGCTGTAAGCCAGCCACTGCCACCCGAGGTaaaaa > 1:509752/1‑250 (MQ=255) ggg‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCGGCCCCAA‑CGGG‑CC‑GAGGATTCCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACCCCAGGTTTCC‑GCCCCCCC‑TCCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCg < 1:574732/250‑1 (MQ=255) aTTGGCGTTAATCCCCATTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTCCACGGTCACACCAGTTTTCC‑GCCCCACC‑TGCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGttcttc < 1:452601/251‑1 (MQ=255) ccccAGTTCTGCCCCAA‑CGGG‑CC‑GAGGGTGTCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAATTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACg > 1:418414/1‑251 (MQ=255) ccAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGCACttaccc > 2:351746/1‑245 (MQ=255) cggCCCAAA‑CGGG‑CC‑GCTGATACCCGGCGGCGCGCAAACCG‑TGCTTTTCAGGAAATTAATTTCCCGGTC‑CCCCCGGTTTCC‑CCCCCCCCCTTCCGCAACGCAAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTg < 2:367627/249‑1 (MQ=255) cAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAAt > 1:88220/1‑251 (MQ=255) ggccgggggagacccGGCGGCGCCCCAACCTATTCTTT‑CAGCCAATAGTGTCCTCGTCCCCACC‑GGTTTCCCGCCCCCCC‑TCCCCCGACCCCACCCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCAc < 2:135668/238‑1 (MQ=255) aGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTg > 1:159819/1‑251 (MQ=255) atatCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGAt > 1:259773/1‑250 (MQ=255) cAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACCCCAGGTTTCC‑GCCCCACC‑TCCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGATACATCTCTGGCCATGCa < 1:289649/251‑1 (MQ=255) cGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGATACATCTCTGGCCATGCAGGcc > 2:559809/1‑251 (MQ=255) aTGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCCCC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAgaga < 1:210271/161‑1 (MQ=255) aTGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCACCCAgaga > 2:210271/1‑161 (MQ=255) cTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGATACATCTCTGGCCATGCAGGCCAGccc > 1:464261/1‑251 (MQ=255) tataGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGATACATCTCTGGCAATGCAGGCCAGCCCCAACGCCTTTc > 2:130560/1‑251 (MQ=255) tCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGATACATCTCTGGCCATGCAGGCCAGCCCCAGCGCATTTCGTCctc > 2:199702/1‑251 (MQ=255) cccctgtttccc‑GCCCCCCC‑TTCCGCATCGCCAACCTCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGATACATCTCTGGCCATGCAGGCCAGCCCCAGCGCATTTCGTCCTCTTTCACTTg < 1:106929/241‑1 (MQ=255) cacCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGATACATCTCTGGCCATGCAGGCCAGCCCCAGCGCATTTCGTCCTCTTTCACTTg > 1:397135/1‑251 (MQ=255) ccAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGATACATCTCTGGCCATGCAGGCCAGCCCCAGCGCATTTCGTCCTCTTTCACTTGCt > 1:379127/1‑251 (MQ=255) aGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGATACATCTCTGGCCATGCAGGCAAGCCCCAGCGCATTTCGTCCTCTTTCCCTTGCTgg > 2:95570/1‑251 (MQ=255) ccccccccC‑TCCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGATACATCTCTGGCCATGCAGGCCAGCCCCAGCGCATTTCGTCCTCTTTCACTTGCTGGGCATGTa < 1:341589/249‑1 (MQ=255) | GCCGTCTCGCCATACGGTATCCACCACAAACGCAGCATCGACATCACATGGTCAATTCGTAATGCGCCGCAGTTTTGCATA‑TTGGCACGCAACAGCTCGATAAACGGTTCATAGGCACGCGCGG‑TGATGATATGCGGGTCCATTGGCGGTAATCCCCAGTTCTGCCCCAA‑CGGG‑CC‑GAGGATATCCGGCGGCGCGCCAACCGATGCTTT‑CAGGCAATATAGTTCACGGTCACACCAGGTTTCC‑GCCCCACC‑TTCCGCTACGCCAACCGCCAGATCACGATACAAGCCAATCGGCATTTCATAGCCCTGGCTTATCTCCCAGCAGGCGGCAAACTGGCTGTAAGCCAGCCACTGCAACCAGAGATAAAAATCGACGTCATCACGATGTTCTTCGCAGAACTGACGCACTTCTGGTGAATCCACGTTCTGATACATCTCTGGCCATGCAGGCCAGCCCCAGCGCATTTCGTCCTCTTTCACTTGCTGGGCATGTA > NC_000913/3548677‑3549169 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |