| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,667,126 | 0 | A | C | 31.8% | 97.9 / 10.8 | 66 | Y241D (TAT→GAT) | hcaT | putative 3‑phenylpropionate transporter |
| Reads supporting (aligned to +/- strand): ref base A (37/8); new base C (1/20); total (38/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.34e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGACTTCGCTACCCTGGCGAGCAGCAATATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACGCCCAACGTCAACAGC > NC_000913/2666877‑2667364 | tGACTTCGCTACCCTGGCGAGCAGCAATATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑Ac > 1:445174/1‑251 (MQ=255) cTTCGCTACCCTGGCAAGCAGCAATATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑Acccc > 1:434744/1‑251 (MQ=255) cGCTACCCTGGCGAGCAGCAATATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCAcc < 2:162221/251‑1 (MQ=255) tACCCTGGCGAGCAGCAATATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGCGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGCCTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCAccgcc > 1:235629/1‑251 (MQ=255) tACCCTGGCGAGCAGCAATATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCAccgcc > 1:540704/1‑251 (MQ=255) gcagcaATATAACACATGGCGGCCAGGTGGCAGACCGTGACGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCAGCACATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGAATTCCGCCCCCACGCCCACCGCCCACCAAT‑ACCCCCCCccccaggccgcga > 2:34260/1‑247 (MQ=255) aaacaataaaactgaggcgcgcCAGGTGGCAAACCGTTAAGGGGCCGCAATGCAGAATTTGCACCACTATCACCCACGGTAACTCCGTAGTTGCCCCC‑ATAATGCCCCAGGCCACTACGCCGAAACTCGCCGAGACCAACGGCAAATCGCGTTCCCTCCAACGGCGGAAAATTTTATTACCCAGCGCAAAGATAATGCCGCCCGCCACCACGCCCTGCGCCCACAAAT‑ACCCCACCGCCGAGGCCGAGTAg < 2:518612/231‑1 (MQ=255) aaTATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGcc > 1:108988/1‑249 (MQ=255) cGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAA‑TCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCCAAGATAATTACTTCCCCCACCACGCCCAGCGACCACAAAT‑ACCCCACCcccgaggccgcgtcacccgccccccg > 2:435322/1‑234 (MQ=255) cATGGCGGCCAGGTGGCAGACCGTGAAGGTGCCGAAATGCAGAATTTGCACCCCTACCAACCACGGCAACGCCGTAGTTGCCCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATACCGCGTGCACTACAACGGCGGAAAAGTTTATTCCTCAGCGCAAAGATAATGACTTCCGCCACCCCGCCCAGCGCCCACAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCtgcctgcc < 1:257475/251‑1 (MQ=255) aTGGCGGCCAGGGGGACGACCGGGAGGGCGCCGCAATGCAGAATTGGACCCACTACCACCCACGGCAACGCCGAAGTTGCTCCC‑ATAAGGCCCCACCGCCCCCCGCAGCAAACCGCCGAGAGCAACAGCATAGCGCTTGCCCTACACCGGCGGAAAAGTTTATTCCCAAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCa < 2:261529/251‑1 (MQ=255) gcCAGGTGGCAGACCGTGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAAt > 1:135128/1‑251 (MQ=255) cAGGTGGCAGACCGTGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGGTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATgg > 2:430888/1‑251 (MQ=255) aGGTGGCAAACCGTGAAGGTGCCGCAATGCAGAATTTGCACCCCTATCACCCACGCCAACGCCGTAGTTGCCCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAATTTTATTACTCAGCGCAAAGATAATGACTCCCGCCACCACGCCCAGCGACCACAAAT‑CCCCCTCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGgc < 1:456094/251‑1 (MQ=255) ggCAGACCGTGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAACCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATATGGCCTTCCGCCACCACGCCCAGCGACCAAAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTa < 1:422292/251‑1 (MQ=255) ccggtaaGGTGCCGCACTCCCGAATTACCACCACTACCAACCCCGTCAACGCTGTAGTT‑CTCCCCATAAGCCCCCAGCCCCCTCCGCCGAAAACCGCGAAAACCAACACCATACCTCGTGCACAAAAACGGCGAAAAAGTTAATTACTCAGCGCAAAGAAAATGTCTCCCTCCCCCACGCCCCGCTACAACAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTaaatctg < 2:380578/246‑5 (MQ=255) cgtaaaGGTGCCCCAATGCAGTATTTGCCCCAATATAAACCCCGGCAACTCCGTAGTTCCCCCC‑ATAATGCCCCAGCGCATTCCGCCGCAAATCGCCGATATCAGCAGCAGACCGCGTGCACTACACCGGCGCAAAAGTTTATTACCCAGAGCAAAGAAAATGACTCCCGCCCCCACGCCTAGCGACCAAAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGt < 2:509866/247‑1 (MQ=255) gTGAAGGTGCCGCAATGCAGCATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCCGCGACCACAAAA‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCCGTAAATTGCGCTAAAACCGt > 2:122331/1‑250 (MQ=255) tgcaGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAAAGCCGCAGTTGATCCC‑ATAATGCCCCAGCGCACTGAGCCGCAAATCGACGAGATCAACAGCATATCGCGTGCACTACACCGGCGGAAAAGTTTATTACTCAGAGCCAAGGTAATGACTTCCGCAACCACGCCCCGCGACCAAAAAT‑ACCCCACCGCCGAGGCCGAGTAGCAAGCTGCCTGCCAGTAAATGGCGCTaaaccccta > 1:565373/4‑244 (MQ=255) tGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCCCGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTa > 1:565376/1‑250 (MQ=255) tGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGCGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAACACCgca > 1:303423/1‑248 (MQ=255) tGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTCAAACCGTa > 1:550821/1‑250 (MQ=255) aaGGTGCCGAAATGCAGAATTTGCACCACTACCAACCTCGGCAACCCCGTAGTTGCTCCC‑AAAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATACCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATa < 1:122331/251‑1 (MQ=255) ggTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTCCAACGGCGGAAAAATTTATTACTCAGCACCAACATAATGACTTCCGCCACAACGCCCAGCGACCCCAAAT‑CCCCCCCCGCCGAGGCCGAGTACCCCGCCACCAGCCAGAAAATGGAGCTCAAACCGTAATatg > 2:147492/1‑249 (MQ=255) gTGCCGCAATGCAAAATTTGCACCACAATCACCCGCGGCAACGCCGTAGGTGCTCCC‑AAAAGGCCCCAGCGCATTACGCCGCAAACCCCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTCCTCATCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGCCCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGc < 1:267723/251‑1 (MQ=255) ggccccaatgaaaattttccaccacTATCACCCCCGGCAACGCCTTGTTTGCCCCA‑ATAATGCCCCAGCGCACTCCCCCGCAAATCGCCGAGATAAACAGCATACCGCGTGCCCTACAACGGCGGAAAAGTTTATTACCCAGCGAAAAGATAATGCCTCCCGCCACCACGCCCAGCGACCACAAAT‑CCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGcc < 2:392373/232‑1 (MQ=255) cAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCAtg > 1:495976/1‑251 (MQ=255) gCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACCCCCCGCGACCCCAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAAATGCGCGAAAACCGTAATAGGCCCCATGGGcc > 2:116668/1‑251 (MQ=255) gCAGAATTTGCACCACTACCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAACCGCCGAGATCAACAGCATACCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCCCCACGCCCAGCGACCACAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGcc < 1:98028/251‑1 (MQ=255) caccaccctCAACCACGGCAACGCCGTAGTTGCTCCA‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATACCGCGGGCACTACAACGGCGGAAAAGTTTATTCCTCGGCGCAAAGATAATGACTTCCGCCCCCACGCCCAGCGACCACAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATa < 1:225551/243‑1 (MQ=255) caccacTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCCCCCCGCCCAGCGACCACAAAT‑ACCCCCCCGCCCAGGCCGAGTAGCCAGCTGCCTGCCAGTAAACGGCGCCAAAACCGAAAAAAGCCGCATGGTCCCCCCGCAAt > 2:498034/1‑250 (MQ=255) aCCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAAAAGGCCGCATGTGCCCCCTGCAATAAACAAACGc > 1:21561/1‑249 (MQ=255) ggCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTAATCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGcc > 1:66683/1‑249 (MQ=255) gCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGCAGCCAGCTGCCCGCCAGTAAATGGCCCTAAAACCCAAATAAGCCGCATGTGCCCCCGGCAATAACCAAACCCCGGCCAGAAAgcg > 2:9427/1‑251 (MQ=255) gcaccc‑ATAATGCCCCAGCGCCCTACGCCGCAAAGCGCCGAGAACAACAGCATATCGCGTGCACTAAAACGGCGGAAAATTTTATTACTCAGCACAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAC‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCt < 1:283117/247‑1 (MQ=255) ccccc‑AAAATGCCCCAGCGCCCTCCGCC‑CCAATCGCCGAGAACAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGc < 1:435322/249‑1 (MQ=255) tCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGc > 1:12505/1‑251 (MQ=255) tAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAAcc > 1:79753/1‑251 (MQ=255) cgcACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCCTGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAAccc > 1:89618/1‑250 (MQ=255) cAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCctgct > 1:446202/1‑251 (MQ=255) aCAGCAAAGCGCGTGCACTACAACGGCGAAAAAGTTTATTACTCAGCGAAAAGATATTGCCTTCCGCCACCCCGCCCAGCGACCACAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTgg < 1:283172/251‑1 (MQ=255) cATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGAc > 2:52183/1‑251 (MQ=255) gtggcacctaaaccggcgaAAAATTTTATTACCAAGCGAAAAGATAAGTACTCCCGCCACCGCGCCCAGCGACCAAAAAA‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGccc < 2:550821/238‑1 (MQ=255) gcgTGCACGACAACGGCGGAAAAGTTTATTCCCCAGCGAAAAGATAATGACTTCCGCCCCCACGCCCAGCGACCCCAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGccc < 1:171615/251‑1 (MQ=255) ggTGCACTACAACGGCGAAAAATTTTATTACTCAGCCAAAAGATAAGGCCTCCCCCCCCCCCGCCCAGCACCCACAAAC‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGcccc < 2:12505/250‑1 (MQ=255) cACTACAACGGCGGAAAATTTTATTACTCAGCGAAAAGATAATGCCTTCCGCCACCCCGCCCAGCGACCACAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTtgt < 1:429339/251‑1 (MQ=255) cACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTtgt > 1:117146/1‑251 (MQ=255) aCGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGCGTAGCCAGCTGCCTGCCAGTAAATTGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACCCAGACCAACCGGTGCTCTCCTGCTGGCGACCTTCCCCTTGTGGCTGa > 2:148020/1‑250 (MQ=255) cggcggAAAAGTTTATTACCCAGCGCAAAGATAATGCCTCCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAAt < 1:452332/251‑1 (MQ=255) aaaaGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTcgg > 1:465150/1‑251 (MQ=255) aGTTTATTACCCAGCGCAAAAAAAATGCCTCCCGCCCCCACGCCCAGCGACCA‑AAATCACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTcggacg < 2:433087/251‑1 (MQ=255) tattaCTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTCATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATAGTCGGACGGATg > 1:285450/1‑251 (MQ=255) tttccTCAGCGCAAAAAAAATGCCTCCCGCCCCCACGCCCAGCGCCAACAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATg < 2:355597/246‑1 (MQ=255) tCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGaa > 2:70697/1‑249 (MQ=255) aaaaaaaaaggcttccccccaccaCCCCCGGCGACAACAAAA‑CCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGagc < 2:21561/233‑1 (MQ=255) aataataACTCCCGCCACCACCCCCAGCGACCACAACT‑CCCCCGCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAgcagca < 1:274783/250‑1 (MQ=255) tAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATg > 1:180848/1‑251 (MQ=255) cccGCCCCCACGCCCAGCGACCACAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCa < 1:150516/249‑1 (MQ=255) ccGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACg > 1:220307/1‑251 (MQ=255) ccGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACg > 1:477194/1‑251 (MQ=255) cccccccagcccccACAAAT‑CCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACGCCCAACg < 2:540704/239‑1 (MQ=255) cacGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCCGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAACCGCGCAGCCGTGATGCCCCGCCCAAcc > 2:191116/1‑250 (MQ=255) acGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTATATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCTAGTTCTGGCAAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACGCCCAACGt > 1:180504/1‑251 (MQ=255) gCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGCAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCCGCATGGATGCCACGCCCAACGTc > 1:325910/1‑250 (MQ=255) ccacccaaaaaT‑CCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCGGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACGCCCAACGTCAACAgc < 2:252696/243‑1 (MQ=255) aaT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGc > 1:326562/1‑165 (MQ=255) | TGACTTCGCTACCCTGGCGAGCAGCAATATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCCGCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTTGCTCCC‑ATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCGCCACCACGCCCAGCGACCACAAAT‑ACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACGCCCAACGTCAACAGC > NC_000913/2666877‑2667364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |