| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,715,620 | 0 | A | C | 26.9% | 77.6 / 10.9 | 52 | G90G (GGT→GGG) | pdxY | pyridoxal kinase 2 |
| Reads supporting (aligned to +/- strand): ref base A (19/19); new base C (0/14); total (19/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.12e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AGTTCGCGCGCTGCCAGAACCGCTTCTTCGACGTTATTTACCGCATGCTCACAGAGTATTTCCAGCTCAACCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAACTCTGCCGCACTGTTACCCGCATGACCATAAACAACGTGAGACTGG > NC_000913/1715378‑1715866 | aGTTCGCGCGCTGCCAGAACCGCTTCTTCGACGTTATTTACCGCATGCTCACAGAGTATTTCCAGCTCAACCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑CTTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTc > 2:152733/1‑251 (MQ=255)aGTTCGCGCGCTGCCAGAACCGCTTCTTCGACGTTATTTACCGCATGCTCACAGAGTATTTCCAGCTCAACCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTc > 1:444847/1‑251 (MQ=255) aaGAACCCCTTCTTCGACGTTATTTACCGCATGCCCACAGAGTTTTCCCAGCTAAACCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTCCCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGCCGGACGATCCCGAGGATATTTTCCCCC‑TGCTCCGCCGATCCCAGAt < 2:516331/250‑1 (MQ=255) agacccGCTTCTGCGACGTGATTCACCTCATGCTCTCAGAGTATGTCCAGCCCAACCAGATGTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACCCCCGGTGAAACGATACAGCCTTTTCCCGGATGCCCCATTACCGGATCGCAAAAATATTTCGCCGGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATa < 2:108448/247‑1 (MQ=255) cGACGTTATTTACCGCATGCTCACAGAGTATTTCCAGCTCAACCATATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCGGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACg < 1:73562/251‑1 (MQ=255) ccgtattttACCGCAGGCCCAAAGAGTATTTCCAGCTCAACCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGGGCCGCA‑CATGAAACTCTGCGACCCCCGGTGCAACGATACAGCCTTTTTCGGGATGCCCCATTCCCGGATCGAAAAAATATTGCGCCTGCGG‑ATTCGGGGCTT‑TCCCCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGc < 2:80622/245‑1 (MQ=255) tttcccGCATGCTCACAGAGTATTTCCAGCTCAAACAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATCCAGCCTTTTTCCGGATGACCCATTACCGAATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGCTATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCAacac > 2:125427/5‑250 (MQ=255) aCCGCATGCTCACAGAGTATTTCCAGCTCAACCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGgt > 1:199708/1‑251 (MQ=255) aTGCTCACAGAGTATTTCCAGCTCACCCAGTTTTGGCGCAATGATAGCGCGGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCTGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATCCGCGGTTT‑TCACCTGACGGACGATACCGAGGATATGTTCCCCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTa < 2:502005/251‑1 (MQ=255) cacaGAGTATTTCCAGCTCAACCAGATTTGGCGAAAAGATACCGCGGGCAGGCAAACCGTGCCGCC‑CAAGAAACTCTGCGACCCCCGGGGAAACGATACAGCCTTTTTCCGGATGACCCATTACCGGTTCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATTTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAAttt < 2:174242/250‑1 (MQ=255) gagTATTTCCAGCTCAACCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCa > 1:13608/1‑250 (MQ=255) cTCAACCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGc > 1:577805/1‑251 (MQ=255) aaCCAGATTTGGCGCAATGATAGCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCtt < 1:413872/251‑1 (MQ=255) ccaagatttggccgaagatagaggCTGGAAGGCAAACCTTGCCGCAACA‑GAAACTCTGCGCCACCCGGTGAAACGATACACACTTTTCCGGGATGACCCATTACCGGACCGCAAAAATATTTCGCC‑GCGGGATTCGCGGCTT‑CCACCTGACGGAAGATACCGAGGATATTTTCACCC‑TTTTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTg < 2:516336/228‑1 (MQ=255) ggCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAAtttt > 1:21099/1‑250 (MQ=255) gcgaattgattccGCTGGAAGGCAAACCGGGCCGCA‑CAGAAAACTCGGCGACCCCCGGGGCAACGATACAGCCTTGTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATGCGCGGTTT‑TCACCTGACGGACGATACCGAGGATTTGTTCCCCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCg < 2:570302/239‑1 (MQ=255) aaTGTTATCGCGGGAAGGCAAACCGGGCCCCA‑CATGAAACTCGGCCCCACCGGGTGCAACGATCCAGCCTTTTCCGGGATGACCCATTACCGGATCGCAAAAATATTTCGCCGCCGG‑ATTCGCGGCTT‑TCACCTCACGGACGATACCGAGGATATTTCCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTa < 2:37417/251‑1 (MQ=255) ggcaggcaAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGAAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGggcg < 1:494428/251‑1 (MQ=255) ggcaAACCGTGCCGCA‑CATGAAACCCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGAAAAAATATTTCGCCTGCGG‑ATGCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCAt < 1:185407/251‑1 (MQ=255) gcaAACCGTGCCCCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCCCCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATc < 2:13608/251‑1 (MQ=255) aaCCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACg > 1:51262/1‑251 (MQ=255) ccggcgcgccaaggaatccctGCGCCACCCGTTGAAAGGATACACCCTTTCCCCGGATGACCCATTCCCGGATAGAAAAATTATTCCCCCCGCGG‑GGTCGCGTCTTCTC‑CCTGACGGACACTACCTGGGATATGTTCCCCC‑TGCGCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCa < 2:436372/232‑1 (MQ=255) cGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACACTTTCGGTTAAATGGCTGGGCGGCATCACgaa > 2:313133/1‑248 (MQ=255) ccGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGcc > 1:129688/1‑249 (MQ=255) gAAACTCGGCGACCCCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTCCCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCCCCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTg < 1:214104/251‑1 (MQ=255) aacctctGCGTCACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCCCCTGACGGACGATACCGAGGATATGTTCCCCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGc < 1:220765/248‑1 (MQ=255) acCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGgtgt > 1:524237/1‑251 (MQ=255) cccGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGtgtg > 2:194586/1‑251 (MQ=255) gcagTGCAACGATACAGCTTTTTTACGTATGACCTCGTGCCGGAGCGAAAAAATATTGTGCCTGCGG‑ATTCGAGGCTT‑TCACAGTACGGATGAAACCGAGGATATGTT‑ACCCATGCTCCGCCGATCCCAGATAGCCTCTTAAGACGGCATCTCAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGACAGTCCATTTGCCGTATTGTGTGTGa < 1:322417/248‑1 (MQ=255) ggTGCAAGGAGACAGCCTTTGTCTGGCTGACGCATTACCGGATCGCAAAAATATTGCGCCGGCGA‑ATTCGCGGTTT‑TCACCTGACGGACGATCCCGAGGTTATGTTCACCC‑GTCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGAtt < 1:406938/251‑1 (MQ=255) aaacccatccccGGACCGAAAAAATATTCCGCCTGCGG‑AGTCGCGTCTT‑TCACCTGACGGACGATACCGAGGATATGTTCCCCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGGTCAGCGGCCa < 2:524237/241‑1 (MQ=255) gACCCATTACCGGACCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCGCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAg < 1:262275/251‑1 (MQ=255) cccATAACCGGATCGAAAAAAAATTTCGCCTGCGG‑ATCCGGGGCTT‑CCACCTGCCGGACGAGCCCGAGGATAGGTTCCCCC‑TGGTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGAc < 2:348581/251‑1 (MQ=255) ggATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTggg < 1:222528/170‑1 (MQ=255) ggATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTggg > 2:222528/1‑170 (MQ=255) ggATCGAAAAAATATTCCGCCTGCGG‑ATTCGCGGCTT‑TCCCCTGACGGACGATACCGAGAATATGTTCCCCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGcc < 1:117827/251‑1 (MQ=255) cacGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCTCCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCa < 1:20992/249‑1 (MQ=255) accgaaaaaaTTTTTCGCCGGGGG‑ATTCGCGGCTT‑TCCCCTGACGGACGATACCGAGGATATGTTCCCCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCg < 2:155481/228‑1 (MQ=255) aTCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCg > 1:155481/1‑233 (MQ=255) aattttccGCCTGCGG‑TTTCGCGGTTT‑TCCCCGGACGGACGATACCGAGATTATGTTCCCCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGgcgc < 2:444847/244‑1 (MQ=255) atatTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGGGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGgcgc > 1:102362/1‑250 (MQ=255) gCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAActct < 1:152733/251‑1 (MQ=255) gcgttttCGCGGCTC‑TCCCCTGAGGGACGATCCCGGGGATATGTCCCCCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAActc < 2:292629/245‑1 (MQ=255) ggCTT‑TCCCCTGCCGGACGATACCGAGGATAGGTTCACCC‑TGCGCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCTGAAACTCTGCCGCACTGt < 1:392194/251‑1 (MQ=255) tt‑tCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTCAATGGCTGGGCGGCATCCCGCAGCCAGTCCCTTTTCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAGCTCTGCCGcccgtttcc > 2:291160/1‑243 (MQ=255) cACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAACTCTGCCGCACTGTTAccc < 1:239857/250‑1 (MQ=255) cgATACCGAGGATATGTTCCCCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAACTCTGCCGCACTGTTACCCGCATGACCATaa < 1:297901/251‑1 (MQ=255) gATACCGAGGATATGTTCCCCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGtt < 1:252164/195‑1 (MQ=255) gATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGtt > 2:252164/1‑195 (MQ=255) ccGAGGATATTTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAACTCTGCCGCACTGTTACCCGCATGACCATAaacaac < 1:396950/251‑1 (MQ=255) gAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTc > 1:131892/1‑175 (MQ=255) ttCACCC‑TGCTCCGCCGATCCCAGATAGCAACTTAATACGGCATCACAGGTGCGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTAGGTTAGATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGGACGGTGTTCTGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAACTCTGCCGCACTGTTACCCGCATGACCATAAACAACGTGAGACTgg > 1:34223/1‑250 (MQ=255) | AGTTCGCGCGCTGCCAGAACCGCTTCTTCGACGTTATTTACCGCATGCTCACAGAGTATTTCCAGCTCAACCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCA‑CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGG‑ATTCGCGGCTT‑TCACCTGACGGACGATACCGAGGATATGTTCACCC‑TGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAACTCTGCCGCACTGTTACCCGCATGACCATAAACAACGTGAGACTGG > NC_000913/1715378‑1715866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |