| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,061,930 | 0 | G | A | 31.0% | 88.3 / 19.1 | 58 | L44L (CTG→CTA) | torD | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Reads supporting (aligned to +/- strand): ref base G (29/11); new base A (0/18); total (29/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.54e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CACACTACGCTGGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCA‑GGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGAT > NC_000913/1061680‑1062170 | cacaCGACGCTGGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTg < 2:97694/251‑1 (MQ=255) cacTAAGCTGGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAAAGGCCCCGTGGAGATGGGGGCGCAGTGCGAATATGTTCCAGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTCTTCGTTGCTGa > 2:500104/1‑250 (MQ=255) acTACGCTGGTGGACATTGAGAAGTAAAACGAAACAGTGGAGCCGGGGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGACTGGTTTTCGTTGTTGaa > 1:159631/1‑250 (MQ=255) cGCTGGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCACCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGACTGGC‑TAGCGCAGTTGATCTCCCGTG‑AGATGGACGATGAAAAACTGACGCAAATCGCCGGGGCGCAGATGGCTGAATGGTTTTCGTTGCTGaaaaacg > 1:518912/1‑248 (MQ=255) ggtggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAAcc < 1:258810/251‑1 (MQ=255) ggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGAGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAAAAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGCAAAACGAAcc‑gcc > 2:109689/1‑251 (MQ=255) aaCGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAAcc‑gcc > 1:496970/1‑235 (MQ=255) aaCGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGGGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAAcc‑gcc < 2:496970/235‑1 (MQ=255) cGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGa > 1:311741/1‑250 (MQ=255) ggTGGAGCGGGGGACTGCTTTTAACGGCCCCGTGGAGATGGGGGCGCAGTGAGAATATGTTCCCGCGTCGCAGGGGAAATCAGGCCCACGCTGAAGGCACAACAGATGGCTGGTTTTTACGCCTGGT‑AAGCGCAGTTGTTCTCCGGGG‑AGCGGGACGATGAACAACTGACGCAAATCGCCGGTGCGAAGAGGGCTGAATGGTTTGCGTTGCTAAAAACCGATCC‑GCCGCTCACTGCGGCGGTGAACG‑AGCt < 1:465688/250‑1 (MQ=255) gTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGCTGAAACACTGACGCAAATCGCCAGTGCGCAGATGGCTGAAGGGTTTTCGTGGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGGACC‑AGCTg > 2:463312/1‑251 (MQ=255) ggAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGGGGACG‑GGCTggg > 2:169892/1‑250 (MQ=255) gAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGa > 1:444857/1‑250 (MQ=255) gCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGGGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGATCTCCCGTG‑CGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAAGGGTTTTCGTTGATGAAAAACGAACC‑GCCGCTCACTGCGGCGGTgtagcggctggaaa > 2:428042/1‑237 (MQ=255) gtgggggggttaaccGGCCCCGTGGAGAGGGGGGCGAGGGGCAAATATGTCCCCGGGCCGCAGGTAAAATCAGGCCCCCGCGGACAGCAAAACAGTGTGCTTGTTTTTCCGCCTGGT‑TAGCGAGGTTGTTCCCCCGGG‑AGCTGGACGATAAACACCTGACGAAAATCGCCAGGGCGCAGATGGCTGAATGGTTTTCGTGGCGAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGt < 2:266823/237‑1 (MQ=255) cgggCGTTAAACGGCCCCGGGGAGAGGGGGGCGCAGCGCGAATATGTCCCCGGGGCGCAGGTAAAATCAGGACCCCGCTGACAGCACAACAGATGGCCTGTTTTTACGCCTGGC‑TAGCGCAGTTTTCCCCCCGGG‑AGCTGGACGATGAACAACTGACGCAAACCGCCAGTGCGCAGAGGGCTGAATGGTTTTCGTGGCAGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTAtt < 2:356244/249‑1 (MQ=255) aaCGGCCCCGTGGAGGTGGTGGCGCAGTGCGAATATGTTCCCGCGCCGCAGGTAAAATCATGACCACGCGGACAGCACAACAGATTGCCTGTTTTTACGCTGGGC‑TAGCGCAGTTGTTCCCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGAAGATGGCTGAATGGTTTTCGTTGCTAAAAAACAAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTg < 1:449500/251‑1 (MQ=255) ccggggggaTGGTGGCGGAGGGCAAATATGTTCCGGGGTCGCGGGTGAAATCATTACCACGCTGACAGCACAACAGAGTGCCTGTGTTTGCGCCTGGC‑TAGGGCGGTTGTTCCCCCGGG‑AGCTGGACGAGGAAAAACTGAGGAAATTCGCTAGTGCGCGGAGGGCTTAGTGGTTTTCGTTGCTAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTAc < 1:268469/244‑1 (MQ=255) ccGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑GGCTGGAAAACCGTATTGCC‑CCGCTGACAGTAc > 1:212807/1‑251 (MQ=255) ggAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑CCGCTGACCGTACGTg > 1:273421/1‑250 (MQ=255) agaTGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCAGGCCCACGCTGCCAGCACAACAGAGTGCCTGGTTTTACGCCGGGC‑TAGCGCATTTGTTCTCCCGTG‑AGCGGAACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGTTTTTCGTTGCGAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTTGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACg < 1:169892/251‑1 (MQ=255) tggtggCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCAGCCACCACAACAGATTGCCTGTGTTTAAGCCTGGC‑TACCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGCCGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGCCAGTCCGTGACGATg > 1:72343/1‑251 (MQ=255) tggtggCGCAGTGCGAATATGTTACCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCAGGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGGGAGCG‑AGCTGGAAAACCGTCTTGCC‑ACGCTGCCAGTACgagaacatg > 2:530854/1‑243 (MQ=255) cgcAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATAGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGGTGCCCGTc > 1:109828/1‑251 (MQ=255) atatTTTCCCGCGTCGCAGTGGAAATCATGCCCACTCGTACAGCAAAACAGATGGCCGGTGTTTACGCCGGGC‑TAGGGCAGTTGTTCGCCCGGG‑AGGTGGAAGATGAACACGTGAGGAAAATCTCCGGGGCGCAGATGGCTGAATGGTTTTCGTTGCTAAAAAACAAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGc < 2:410240/251‑1 (MQ=255) atatGTTCCCGCGTCGCCGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGGGTTTACGCCTGGC‑TAGCGCAGATGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAGAACGAACC‑GCCGCTCACTGCGGCGGTGTACGCAG‑TAGAAAACCGGATTGCCCAC‑CTGACAGTACGTgcaggtggccggcgggaaactgc > 2:369123/1‑229 (MQ=255) tgtgtccggcgcggagggTGAAATCAGGCCCACGTTGCCAGCAAAAGAGATTGCCGGTGTTTACGCCTGGC‑TGGCGGTGGTGTTCTCCCGTG‑ATCGGGAGGAGGAAAAACTGAAGCAAATCGCCGGTGCGAAGGGGGCGGAAGGGTTTTCGTTGCGAAAAAACGACCC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGcc < 2:224963/234‑1 (MQ=255) atGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGGGAAAC‑AGCTGGGAAACCGTATTGCC‑ACGCTGACCGTACGTGGCGGTGCCCGTCTGGGACAGGccc > 2:146890/1‑250 (MQ=255) gTTCCCGCGGCGCAGGTAAAACCATGCCCACGCTGACAGCAAAACAGATTGCTTGTGTTTACGCCTGGC‑TTGGGCAGTTTTTCTCCCTGG‑AGCGGGAAGAGGAAAAACTGACGCAAATCGCCAGTGCGCAGAGGGCTGAATGTTTTGCGTGGCTAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCcgcg < 1:109689/251‑1 (MQ=255) ttCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATCGCCTGTGTTTCCGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTAACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGCGAACG‑AGCTGGAAAACCGGATTGCC‑ACGCTGACAGAACGTGACGATGCCCGCCTGGAACTGGCCGCgg > 1:341672/1‑251 (MQ=255) cgcgTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCTTTGGTTTACGCCGGGC‑TAGCGGAGTTGTTCCCCCGTG‑AGCGGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGAGGGCTGAAGGTTTTTCGTTGCAAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACtt < 1:499973/251‑1 (MQ=255) gTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGAGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTg > 1:420119/1‑251 (MQ=255) cGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑CCGCTGACCGTACGGGGCGATGCCCGGCTTGAACTGGCCGCGGACTTTTGCGGCCTTGTTT‑TGCT‑GACCGac > 2:132233/1‑251 (MQ=255) cacagtaggttcccgttgtTTACGCCGGGC‑AAGCGATGGTGTTCTCC‑GTGGAGCTGGACGATGAACACGTGACGAAAACCGCCGGCGCGCAGATGGCTGAAGGGTTTGCGTTGTAAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAgcg < 2:105366/235‑1 (MQ=255) caGATTGCCTTTGTTTCCGC‑TGGCCTTGCGCAGTTGTCCTCCCGTG‑AGCTGGCCGATGAACAACTGACGCAAACCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCt < 1:426125/251‑1 (MQ=255) ttgccgggttttACGCCTGGC‑TAGAGCAGTTTTTCTCCCGTG‑AGCTGGACGATGAACACCTGACCCAAACCGCCAGTGCGCAGATGTCTGAATGGTTTTCGTTCCTAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGcc < 1:516137/241‑1 (MQ=255) tgtgTTTCCGCCTGGC‑TAGCGCAGTTGTTCCCCCGTG‑AGCTGGACGATGAACAACTGACGAAAATCGCCAGTGCGCAGAGGGCTGAATGGTTTTCGTTGCTGAAAACCGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TAt < 1:175146/249‑1 (MQ=255) cGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑CGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGGATTGCC‑ACGCTGACAGTAAGTGACGATGCCCGGCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCCCTGCCG‑CATGCCTCGGCCt > 1:490285/1‑251 (MQ=255) ggcgcAGTTGTTCTCCCGTG‑GGCGGGACGATGAACAACTGCCGAAAATCGCCGGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAgg < 1:90132/250‑1 (MQ=255) ggcgcAGTTGTTCCCCCGGG‑GGCTGGACGATGAACAACTGACCAAAAGCGCCAGTCCGCAGTTGGCTGAATGGTTTTGGTTGC‑GAAAAACCAACCCGCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAg < 1:63825/249‑1 (MQ=255) aGCGCAGTTGTTCTCCCGTG‑AGCTGGGCGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACCAACAgg > 1:69772/1‑251 (MQ=255) ggtttgtttcccccGTG‑AGCTGGACGATGAACAACTGACGCAAACCGCCTGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACg < 1:431253/240‑1 (MQ=255) gcAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGGACG‑AGCTGGAGAACCGTATTGCC‑ACGACGACAGTACGTTACGATGCCCGTCGGGGACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GGCCGACAAACAAGCGGCGCCGCCGGTA‑GCATCGGCCTACAAACAAGACg > 2:487255/1‑251 (MQ=255) aGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGGAAACCGTATTGAC‑ACGCTTCCAGTAAGTGACGCTGCCCGTCTGGCACCTGCCGCGGCCTTTTGCGGCCT‑GTTTCTTATTGCCCG‑CAAACAAGCTGCGCTGCCC‑GATGCCGCGGCCTTCAAACaagaag > 2:327934/1‑244 (MQ=255) cccGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGGACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGGTGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCtgat‑ggacggc > 2:70103/1‑191 (MQ=255) gTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTTCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTaa > 1:580093/1‑250 (MQ=255) tG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGCCTGAATGGTTTTCGTTGCTGAAAAGCGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTTAT‑TACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCCACAAACAGGACGAGCAAGAGATTaaa > 2:48522/1‑250 (MQ=255) gcgggaagaggaacaccggACGCAAACCGCAAGTGCGCAGAGGGCTGAATGGTTTGCGTTACTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCt < 1:177565/233‑1 (MQ=255) gCTGGACGATAAACAACTGACGAAAACCGCCAGTCCGCAGATGTCTAAATGTTTTCCGTTGCTAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCt < 1:149272/251‑1 (MQ=255) gAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTg > 1:416672/1‑250 (MQ=255) aacaacTGACGAAAACCGCAAGTGCGCAGAGGGCTGAATGGTTTTCGTTGCGAAAAAACAAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAg < 1:426766/251‑1 (MQ=255) accggACGAAAATCGCGAGTGCGCAGAGGGTTAAATGGTTTTCGTTGCAAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCa < 1:151061/247‑1 (MQ=255) aacaaaatggccggcgcgcAGATGGCTGAAGGTTTTTCGTTGCTGAAAAGCAAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCA‑GGGa < 1:408901/235‑1 (MQ=255) ccccAGTGCGCAAATGGCTAAATGTTTTTCTTTTCTAAAACCCAAACC‑GCCGCTCCCTGCGGCGGTGAACG‑AGCTAGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCA‑GGGATGGAAACCa < 1:496232/249‑1 (MQ=255) gagggCTGAATGTTTTTCGTTGCGAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCA‑GGGATGGAAACCAGCGGCAATTTCa < 1:275942/248‑1 (MQ=255) gATGGCTGAATGGTTTTCGTTGCTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGGTGGAAAACCGAATTGCC‑ACGCTGACAGTACGGGACGATGCACGTATGGAACAGGCCGCGGACTTTTGGAGCCT‑GTTTCTGAT‑GGAAGAAAAACAAGCGGCGCTGCCG‑GATGGATCGGCCAACAAACAGGACGGGCCAAAGATTAAAAGCTTATTAGTT‑AGGGACGGGATGGAAAACAGCGGCAATTTc > 1:560023/1‑250 (MQ=255) gAATGGTTTTCTTTGCGAAAAAGCGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCA‑GGGATGGAAACCAGCGGCAATTTCAACGAAcc < 1:48522/251‑1 (MQ=255) aTGGTTTTCGTTGATGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCA‑GGGATGGAAACCAGCGGCAATTTCAACGAACCgg < 1:146890/251‑1 (MQ=255) ttCGTTGCTAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCA‑GGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGat < 1:368876/250‑1 (MQ=255) | CACACTACGCTGGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGC‑TAGCGCAGTTGTTCTCCCGTG‑AGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACC‑GCCGCTCACTGCGGCGGTGAACG‑AGCTGGAAAACCGTATTGCC‑ACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCT‑GTTTCTGAT‑GACCGACAAACAAGCGGCGCTGCCG‑TATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCA‑GGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGAT > NC_000913/1061680‑1062170 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |