Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,093,481	IS2 (+) +5 bp	coding (606‑610/1359 nt)	dgcT →	putative diguanylate cyclase DgcT

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	381260 =	NA (NA)	35 (0.620)	34/486	0.6	97.2%	noncoding (1/1331 nt)	IS2	repeat region
	?	NC_000913	= 1093485	1 (0.020)					coding (610/1359 nt)	dgcT	putative diguanylate cyclase DgcT
*	?	NC_000913	1093481 =	1 (0.020)	32 (0.560)	30/490	0.8	96.9%	coding (606/1359 nt)	dgcT	putative diguanylate cyclase DgcT
	?	NC_000913	= 1651548	NA (NA)					noncoding (706/706 nt)	IS2	repeat region

AATTTATCGCATCCGGTAGCGATAATTCCCTCTGGAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAA  >  NC_000913/381010‑381502                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                    aaTTTATCGCATCCGGTAGCGATAATTCCCTCTGGAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACt                                                                                                                                                                                                                                                     <  1:338389/251‑1 (MQ=255)  aTTTATCGCATCCGGTAGCGATAATTCCCTCTGGAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACt                                                                                                                                                                                                                                                     >  1:114591/1‑250 (MQ=255)         gCATCCGGTAGCGATAATTCCCTCTGGAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGc                                                                                                                                                                                                                                            >  2:267091/1‑251 (MQ=255)                                  ggAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAata                                                                                                                                                                                                                   <  1:510743/251‑1 (MQ=255)                                   gAGTTCGATCAGACACGGGCTGGTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGAACAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAAGCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAatat                                                                                                                                                                                                                  <  1:53688/251‑1 (MQ=255)                                   gAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAatat                                                                                                                                                                                                                  >  1:33395/1‑251 (MQ=255)                                     gTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATc                                                                                                                                                                                                                 >  2:439210/1‑250 (MQ=255)                                     gTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCa                                                                                                                                                                                                                <  2:29494/251‑1 (MQ=255)                                       tCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCAc                                                                                                                                                                                                               <  2:141868/250‑1 (MQ=255)                                        cGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCCCtt                                                                                                                                                                                                             >  2:365731/1‑251 (MQ=255)                                        cGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACtt                                                                                                                                                                                                             >  2:283578/1‑251 (MQ=255)                                                accGGGCTGTTCATCCGAACGATGATTACTGGTACGTTACT‑GTGCGCCTAAATATGCTTGGTTTGCAACTACCGAGTCGGCAAAAAAACATTGCGGTCCAATCGTTGCTTCCGCGTCAAGAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCAGAATTACTAGA‑CTGGCCCCCTGAATCTCCAGTCATCCAATATCACTTAAATAAGt                                                                                                                                                                                                     <  2:490819/249‑1 (MQ=255)                                                           cATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTa                                                                                                                                                                                           >  1:289477/1‑250 (MQ=255)                                                              ccAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATAc                                                                                                                                                                                       >  2:295841/1‑251 (MQ=255)                                                                       gatTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGttttt                                                                                                                                                                               >  1:108100/1‑250 (MQ=255)                                                                           aCTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTGTTAATCGCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGAc                                                                                                                                                                           <  1:568279/250‑1 (MQ=255)                                                                                tacgt‑acTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGCCTAGTc                                                                                                                                                                      >  1:489/1‑250 (MQ=255)                                                                                          gtgCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGTAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGaa                                                                                                                                                             <  2:464808/250‑1 (MQ=255)                                                                                           ggagcCTAAAGATGCATGGTGTGCAACTACCGAGGAGGCAATAAAAAATTGAGGACCAATAGTTGCTTCGGCTGCAAGAACCGCATTTTTAATCTCGGTGGCAAAACAAATGTTTACGACATTGCTGATTATAGTGCCAGGACGAAGAAACGCATAATTACTAGA‑ATGGACTCCTGAATCTCCAGATAACCAAGATCAATTAAATAAGTGATAGTATTAATACTAGTTTTGAGACTAGGCATTGGAGAACa                                                                                                                                                           <  2:209540/248‑1 (MQ=255)                                                                                              gcCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAAAACCgat                                                                                                                                                        >  2:377326/1‑251 (MQ=255)                                                                                               ccTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAgatg                                                                                                                                                       >  2:419216/1‑251 (MQ=255)                                                                                                   aaTATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAAGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCaa                                                                                                                                                                                                                     >  1:494288/1‑185 (MQ=255)                                                                                                   aaTATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAAGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCaa                                                                                                                                                                                                                     <  2:494288/185‑1 (MQ=255)                                                                                                    atatGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAtgattg                                                                                                                                                   >  1:221005/1‑250 (MQ=255)                                                                                                         ccTGGTTTTCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATATCCGCATTTTTAATCTCGGTGGCAAAACCAATTTGTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGATAACAGATGATTGATGTCt                                                                                                                                             <  2:411764/251‑1 (MQ=255)                                                                                                                 gCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTTAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAggttgttcc                                                                                                                                                  >  2:13618/1‑230 (MQ=255)                                                                                                                 gCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTTAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAggttgttcc                                                                                                                                                  <  1:13618/238‑9 (MQ=255)                                                                                                                  cAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATACGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCgg                                                                                                                                    >  2:332216/1‑251 (MQ=255)                                                                                                                              cGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGa                                                                                                                         <  1:419216/250‑1 (MQ=255)                                                                                                                                     aaaaCATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCGGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTAc                                                                                                                 >  2:543232/1‑251 (MQ=255)                                                                                                                                             gCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAg                                                                                                          <  2:281074/250‑1 (MQ=255)                                                                                                                                                     aTCGTTACTTCCGCTTCAATAACCGCATTTGTAATCTCGGTGGCAAAACCAATTTTTACGCCAGTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATc                                                                                                 <  2:140760/251‑1 (MQ=255)                                                                                                                                                          tGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCaa                                                                                             <  1:177130/250‑1 (MQ=255)                                                                                                                                                             ttCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTa                                                                                                                                                                                                            >  2:249908/1‑136 (MQ=255)                                                                                                                                                             ttCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTa                                                                                                                                                                                                            <  1:249908/136‑1 (MQ=255)                                                                                                                                                                     cAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGc                                                                                                                                       <  2:149393/197‑1 (MQ=255)                                                                                                                                                                     cAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGc                                                                                                                                       >  1:149393/1‑197 (MQ=255)                                                                                                                                                                       aTAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGc                                                                               <  2:289477/251‑1 (MQ=255)                                                                                                                                                                         aaCCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCtt                                                                             <  1:51607/251‑1 (MQ=255)                                                                                                                                                                               aTTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAAcc                                                                       <  1:267091/251‑1 (MQ=255)                                                                                                                                                                                tttttAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGCATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGCGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTAAGCAGAGCTTTGAACCg                                                                      >  2:330199/1‑251 (MQ=255)                                                                                                                                                                                     aaTCTCGTTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCTAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGAt                                                                 <  1:1274/251‑1 (MQ=255)                                                                                                                                                                                     aaTCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGAt                                                                 >  2:79759/1‑251 (MQ=255)                                                                                                                                                                                                    aCCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGCAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGt                                                  >  1:36285/1‑251 (MQ=255)                                                                                                                                                                                                    aCCAATTCTCACGCCATTGCTGATTATTGTGACCGGACGCATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGATTTTAGACTAGTCATTGGAGACCAGATGCTTGATGTCTTAGGGCCGGAGACACGCAGACGGCGTACCACACAGGAAACGATCGAACTTGTTCAGCAGAGATTTGAACCGGGGCTGACGGTATCCCTCGt                                                  >  2:539195/1‑251 (MQ=14)                                                                                                                                                                                                                  cATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATg                                    >  2:346852/1‑251 (MQ=255)                                                                                                                                                                                                                     tGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGgt                                  <  1:62018/250‑1 (MQ=255)                                                                                                                                                                                                                      acTGATTATTGAGCCAGGGCGAATAACCGCATAATAACTAGA‑CTGGCCCCCTGAGTCCCCAGACACCTAATATCACTTAAATCAGCAATAGTCATAATACTAGTTTTTAGACTAGTCATTGGAGAACCGACGATTGATGTCTTAGGACCGGCGCAACGCAGACGGCGTACCACACAGGAAAAGATAGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGACTCCCCAGTTGACCGGCAACATgggat                                >  2:380913/2‑248 (MQ=11)                                                                                                                                                                                                                         gATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCAGGAGCAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTagc                             >  1:577183/1‑251 (MQ=255)                                                                                                                                                                                                                          attattGTGCCAGGACGAATAAACGCATAGTTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTagc                             >  1:7481/1‑250 (MQ=255)                                                                                                                                                                                                                          attattGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTagca                            <  1:221244/251‑1 (MQ=255)                                                                                                                                                                                                                               tgtgCCAGGAGGAATAAACGCATAATTACTAGA‑CTGGCCACCTGAATCTCCAGACAAACAATATCACTTAAATAAGTGATAGGCTTAATACTAGTTTTTATACTAGTCATTGGAGAACAGATGAGTGATGTCTTAGGGCCGGAGAAACGCAGACGTCGTACCACACAGGAAAAGAGCGCAATTGTTCAGCAGAGATTTGAACCGGGGTTGACGGTCTCCCTCGATGCCCGGCAAAATTGTGTAGcagcca                        <  2:179001/250‑1 (MQ=14)                                                                                                                                                                                                                                      ggACGAATAAACGCATAATTA‑TAAATCTGGCCCCCCGAAGCTCCAGACAACCAATATCAATTAAATAAGTGATTGGCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCTTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTATCAGCCAGCCAGTTa                <  2:514670/251‑1 (MQ=11)                                                                                                                                                                                                                                          gAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTtc            >  1:99043/1‑251 (MQ=37)                                                                                                                                                                                                                                                    aTAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTaa  <  1:79759/251‑1 (MQ=32)                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                    AATTTATCGCATCCGGTAGCGATAATTCCCTCTGGAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGT‑ACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGA‑CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAA  >  NC_000913/381010‑381502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.