| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,218,794 | C→T | V95M (GTG→ATG) | aer ← | aerotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,218,794 | 0 | C | T | 95.8% | 65.0 / NA | 24 | V95M (GTG→ATG) | aer | aerotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (12/11); minor base G (0/1); total (12/12) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
CCAGCAAGATAAACATCAGGGTCATCACTCCACGCGCCCGCCAGCGAAGCGGTAATGAAGGCAGTTTACCCAGCCAGCCTTTACGCACCACCAGGCCTTTATGAATACGCTTACTGGTACGTCCGGCGTTCAACGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCTGCACAAAAGTGTCATTAGCATGAGTGATATAGCTTTGCAGATCGGTAGTGGACATCAGAGTGGTAT > NC_000913/3218548‑3219027 | ccAGCAAGATAAACATCAGGGTCATCACTCCACGCGCCCGCCAGCGAAGCGGTAATGAAGGCAGTTTACCCAGCCAGCCTTTACGCACCACCAGGCCTTTATGAATACGCTTACTGGTACGTCCGGCGTTCAACGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCa > 1:190122/1‑250 (MQ=255) aCATCAGGGTCCTCACTCCACGCGCCCGCCAGCGAAGCGGTAATGAAGGCAGTTTACCCAGCCAGCCTTTACGCACCCCCAGGCCTTTATGAATACGCTTACTGGTACGTCCGGCGTTCAACGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCAACTGATTTTTCCCTCGCGCACCCTCGGTACCGCATTGGCCCGCATCCAATAAAGGTCAcc > 2:180109/1‑250 (MQ=255) gggTCATCACTCCACGCGCCCGCCAGCGAAGCGGTAATGAAGGCAGTTTACCCAGCCAGCCTTTACGCACCACCAGGCCTTTATGAATACGCTTACTGGTACGTCCGGCGTTCAACGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGACCGCATCCAATAATGGACACCCTTTTTg > 2:88666/1‑251 (MQ=255) cGGTAATGAAGGCAGTTTACCCAGCCAGCCTTTACGCACCACCAGGCCTTTATGAATACGCTTACTGGTACGTCCGGCGTTCAACGATTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGCCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGACTTTTCACGATGCCGCTCCAGGGcc > 1:96294/1‑250 (MQ=255) aTGAAGGCAGTTTACCCAGCCAGCCTTTACGCACCACCAGGCCTTTATGAATACGCTTACTGGTACGTCCGGCGTTCAACGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCATGCCTCCCCt > 2:243068/1‑251 (MQ=255) gccagccTTTACGCACCACCAGGCCTTTATGAATACGCTTACTGGTACGTCCGGCGTTCAACGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACcac < 1:276075/251‑1 (MQ=255) gcacccccagtctttaaTGAATCCGCTTTCTGGTACGTCCGGCTTTCAACGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAAc < 1:247069/235‑1 (MQ=255) gCACCACCAGGCATTTATGAATACGCTTCCTGGTACGTCCGGCGTTCAACGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGATACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCCTTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAAc > 2:146628/1‑251 (MQ=255) ccaccaGGCCTTTATGAATCCGCTTACTGGTACGTCCGGCGTTCAACGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAAcgcc < 1:96300/251‑1 (MQ=255) caccaGGCCTTTATGAATACGCTTACTGGTACGTCCGGCGTTCAACGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGGTTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAAcgcac > 2:246634/1‑249 (MQ=255) tttggatactctgcctggtcgttCCGGCGTCCAACCCTTGGTACAGCGGCTCCCCCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTTATTTTTACCTCGCGCACCATCGGTACCGCATTGGCCCGCAGCCAATAATGGTCACCATGTTTGCGGCGATTATTCCCGATGCCGCGCCAGGGCTCCCCTTTTTTCAGGGTTAACCACATAGCCGCAACCGCCGCTGTTGGCat < 2:13252/228‑1 (MQ=255) actcTTACTGGTACGTCCGGCGTTCAACGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATAACCGGGt < 1:84011/248‑1 (MQ=255) gCTTACTGGTACGTCCGGCGTTCAACGATTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGCTTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATACAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCAGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCACACGCCGCTTTTGGCATATACGGGTgg > 2:74286/1‑250 (MQ=255) aaCGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTTATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGccc < 1:180109/251‑1 (MQ=255) acccgcgccTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACTAACCGACATATAGCCACTGATTTTGCCCTCTCTCACCATCGGTACCGCATTTGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGGTAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAAct < 2:103357/242‑1 (MQ=255) cAGCGGCTCCACCGCCGCGCTCTCTTCATCCGTCGCCCGGGGACGCATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCt > 2:197628/1‑150 (MQ=255) cAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCt < 1:197628/150‑1 (MQ=255) cGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACAGCATTGGCACGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGc > 1:149670/1‑250 (MQ=255) ccGTCGCCCGGGTACGAATCGACATATAGCCACGGATTTTTCCCTCGCGCACCAGCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCAGATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTAGTAACTCTTGCAAGGGATAGCCGCTCACCTGCACaaa < 2:149670/250‑1 (MQ=255) aCGAATCGACATATAGCCACTGATGTTTCCCTCGCGCACCATCGGTACCTCATTGGCCCGCATCCAATAAGGGTCACCATTTTTGCGGCGATTTTTCACGATTCCGCTCCAGGGCTCCCCTTTTTTCAGTGTGAACCACATATCCGCAAACGCCTCTTTTGGCATATCCGGGTTACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCTGCACAAAAGTGTTATTAGCa < 1:265692/250‑1 (MQ=255) aTCGACATCTAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCCTATCCGGGTGAAGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCACGGTATAGCCGCTCACCTGCACCCAAGTGTAATTAGCATGAGt > 2:279594/1‑251 (MQ=255) cGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCTGCACAAAAGTGTCATTAGCATGAGTGa < 1:110139/251‑1 (MQ=255) cATCGGTAACGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCTGCACAAAAGTGTCATTAGCATGAGTGATATAGCTTTGCAGATCGGTAGTGGACATCag > 2:309557/1‑249 (MQ=255) aCCGCATTGGCCCGCATCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTGCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCTGCACAAAAGTGTCATTAGCATGAGTGATATAGCTTTGCAGATCGGTAGTGGACATCAGAGTGGTAt < 1:37039/250‑1 (MQ=255) | CCAGCAAGATAAACATCAGGGTCATCACTCCACGCGCCCGCCAGCGAAGCGGTAATGAAGGCAGTTTACCCAGCCAGCCTTTACGCACCACCAGGCCTTTATGAATACGCTTACTGGTACGTCCGGCGTTCAACGCTTTGTACAGCGGCTCCACCGCCGCGATCTCTTCATCCGTCGCCCGGGTACGAATCGACATATAGCCACTGATTTTTCCCTCGCGCACCATCGGTACCGCATTGGCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCTGCACAAAAGTGTCATTAGCATGAGTGATATAGCTTTGCAGATCGGTAGTGGACATCAGAGTGGTAT > NC_000913/3218548‑3219027 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |