| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,541,967 | IS5 (–) +4 bp | intergenic (+408/‑67) | fimB → / → fimE | Type 1 fimbriae regulatory protein FimB/regulator for fimA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3652036 = | NA (NA) | 18 (0.630) | 17/484 | 0.5 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 4541970 | 0 (0.000) | intergenic (+411/‑67) | fimB/fimE | Type 1 fimbriae regulatory protein FimB/regulator for fimA | |||||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 28 (0.980) | 27/484 | 0.2 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 4541967 = | 0 (0.000) | intergenic (+408/‑70) | fimB/fimE | Type 1 fimbriae regulatory protein FimB/regulator for fimA | |||||
TCTTCAAAATAAATAAACAAAATCATTCATAAATTTACACATCACTTAAAATCTCCTGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTA > NC_000913/4541722‑4542211 | ggtttcaagcggataaggtcgtcggtcattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAtt < 2:165745‑M2/6‑1 (MQ=255) ttccagcggataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTg > 2:29894‑M2/243‑251 (MQ=255) cagcggataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttcttgtctgacggcgcttactgctgaattcactgtcgtcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaatcatgatctcatatcagggacttgttcgcaccttccCTAATTTTGAcc < 2:129‑M2/12‑1 (MQ=255) taaataaaCAAAATCATTCATAAATTTACACATCACTTAAAATATCATGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcg < 1:280385‑M2/250‑11 (MQ=255) aaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAgg < 1:175928‑M2/20‑1 (MQ=255) aaggtcgccggccattaccagccttggggtaaaacggctagatgacttccaccatgttttgccatggcagaatctgctccatgagggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagatgatgactcatgatgaaccctgatctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAgg > 1:285422‑M2/232‑251 (MQ=255) cggccattaccagccgtggggtaaaacggcacgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaagctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcgccttccCTAATTTTGACCGATTGAGGTTTCctag < 2:167675‑M2/28‑2 (MQ=255) ggctattaccagccttggggtcaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaagctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTGTGACCGATTGAGGTTTCCtata < 2:191470‑M2/29‑1 (MQ=255) atAAATTTACACATCACTTAAAATCTCCTGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAACTGGACGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcgaataagcggggaaattcttc < 1:15027‑M2/251‑31 (MQ=255) aCTTAAAATCTCCTGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtc > 1:215531‑M2/1‑206 (MQ=255) gctcgatgacgtcctccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTa < 1:188314‑M2/56‑1 (MQ=255) ctcCTGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt < 2:86652‑M2/251‑55 (MQ=255) cgatgacttccaccatgttgtgccatggcagaatctgcgccatgcgggacaagaaaatcgcttttctggtctgacggctcttactgctgaattcactgtcggcgaaggtaagttgatgacgcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgtgcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAgg < 2:246250‑M2/58‑1 (MQ=255) gacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGtac < 1:79273‑M2/63‑1 (MQ=255) acttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGtact < 1:29894‑M2/64‑1 (MQ=255) gcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCGCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGtt < 1:195260‑M2/86‑1 (MQ=255) tttAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc > 2:219139‑M2/1‑168 (MQ=255) gCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat > 2:224428‑M2/1‑163 (MQ=255) cccatgcgggacaagaaaatctcgtttctggtctgacggcgcttcctgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTAGTGTGAGTAAACGTCGTTATCTTACCGGt < 2:175432‑M2/97‑1 (MQ=255) ggAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg < 1:139445‑M2/251‑95 (MQ=255) aaTCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCTCAGCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgcctcagtcatttcatttcttcatgtgtgatccgattttttctcccgtaaatgccttgaatcagc > 2:272885‑M2/1‑150 (MQ=255) gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGtt > 1:291671‑M2/146‑251 (MQ=255) tctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCatg > 1:245645‑M2/136‑250 (MQ=255) tttctggtatgacggcccttactgatgaattcactgtcggcgaaggtaagttgatgactcatgatgaaacatgttctctggctccagatgacaaacgtgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTACTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGAAAAGAAGTTCAGGCCATGATGc > 2:213445‑M2/131‑249 (MQ=255) gTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct > 2:46552‑M2/1‑132 (MQ=255) ttATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATCTTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGCGGTTATCTTTTTATCTATTGGGCTAAggaagctgcg < 1:313320‑M2/141‑11 (MQ=255) aaatcactgacgaaagatgatctcacatcCGCGATATTTTATTTTTGTATGCTATTTAATGTACTTGACTGATAGCCACATCACTCCGTGTGTGGTTCTCTTTTTATCTATTGGGCTAAggacggtgcgaataagcgggcacattcttctaggctgactcagtcatttcatttcttcatgtttaagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc < 2:41652‑M2/237‑133 (MQ=255) tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAaaggggg > 2:139105‑M2/106‑249 (MQ=255) gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCGTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCt < 2:81777‑M2/162‑1 (MQ=255) ttattttTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcgattaagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaattccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagttctctcccactgacg < 2:57546‑M2/251‑171 (MQ=255) catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgccccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGAACTACTATTGTGAGTAAAAGTCGTTATCTTACCGGGAACAAGGTTCAGGCCATGATGAAGGAGGTTTGTTTCTGGGCTACAGGAGCGAGAGATTATTTACTTAttctgttgggcatacc > 2:9958‑M2/72‑244 (MQ=255) gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGc < 2:221182‑M2/182‑1 (MQ=255) gaaccatgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTTTTCTGTTGGCATATCGGCATgg > 1:244044‑M2/66‑251 (MQ=255) cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTTCGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGTTTTGTTACGGGGCAACGGTAGTCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATg < 1:206903‑M2/190‑1 (MQ=255) tGTAATTGACTGCTAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtccgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaa < 2:108720‑M2/250‑191 (MQ=255) aaTTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgacgcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaagcagcctagttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcgcgaaaca > 1:108720‑M2/1‑57 (MQ=255) ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATTGTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGGTGGCATATCGGCATGGGATGCGTATTAGTGAAc < 1:316026‑M2/203‑1 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATc < 1:139105‑M2/212‑1 (MQ=255) aTCACTCAGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttacggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacgggttggccagcgtgaat < 2:23164‑M2/250‑211 (MQ=255) gatctcatatcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCAtt < 1:244410‑M2/218‑1 (MQ=255) atctcatatcagggacttgttcgcaccttccCAAATTATGACCAATTGCGGTTTCCAATAGGTATTCATTCAAATATATCTCAGATAGGAGTACTACTATTGTGCGTAAACGTCGTTATCTTACCGGTAAAGAAGATCAGGCCATGATGCAGGCGGTTTGTTACGGGGGAACGGGAGCCAGAGATTATTGTCTTATTCTGGTTGCATATCGGCAAGGAGTGCTTATTAGTGAACTGCTTGGTCTGCAatat > 1:175613‑M2/32‑251 (MQ=255) cGTGTGTGGTTATCTTTTTATCTATTGGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatgtttgctcccgtaaatgccttgaatcagcctatttagaccggttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcg > 1:106227‑M2/1‑33 (MQ=255) cGTGTGAGGTTATCTTTTTATCTATTGGGCTAAggcaggtgcgactaagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttcgaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcg < 2:106227‑M2/238‑206 (MQ=255) atcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCata < 1:56910‑M2/177‑1 (MQ=255) atcagggacttgttcgcaccttccCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCata > 2:56910‑M2/25‑201 (MQ=255) ttGGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgcctcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttcagca < 1:258653‑M2/250‑242 (MQ=255) | TCTTCAAAATAAATAAACAAAATCATTCATAAATTTACACATCACTTAAAATCTCCTGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTA > NC_000913/4541722‑4542211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |