New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 256107 | 22 (0.770) | 17 (0.610) | 16/468 | 0.5 | 44.0% | coding (131/459 nt) | gpt | xanthine‑guanine phsophoribosyltransferase |
? | NC_000913 | 371382 = | 22 (0.790) | coding (144/867 nt) | mhpC | 2‑hydroxy‑6‑ketonona‑2,4‑dienedioate hydrolase |
CATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGACAACCAGCGCGAGCTTAAAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCATCGTTATTGATGACCTGGTGGATACCGGTGGTACTGCGGTTGCGATTCGTGAAATGTATCCAAAAGCGCACTTTGTCACCATCTTCGCAAAACCGGCTGGTCGTCCGC > NC_000913/255870‑256337 | cATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGGGCGTTACTGGagcgg > 2:273871/1‑250 (MQ=255) ggTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTAt < 1:141285/249‑1 (MQ=255) ggTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTCCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGTACATGTTGCATATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgca < 1:197466‑M1/251‑27 (MQ=255) gTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCg < 1:312766/251‑1 (MQ=255) ccAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCATGTCGATAc < 1:308814/251‑1 (MQ=255) ataATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagagg < 2:235554‑M1/249‑48 (MQ=255) ataATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagagg < 1:180325‑M1/249‑48 (MQ=255) aaTCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaccttcagccgcaatatcgatccgctggtagaggcggg > 1:281669‑M1/1‑200 (MQ=255) aTCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGGATTCGTCATGTCGATACCGTTTTTATTTcc > 2:236482/1‑251 (MQ=255) cgcgCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCAGGTCGAAACCGTTTGGATTTCCAGCt > 2:202225/1‑251 (MQ=255) agcAACCTATTTTACCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCATATGAGCGTAAACTACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGAGGCGATCTGGTACCGGGTGCGTTAAGGGCTCTTGAAATGGGGATTCGTCATGTCAATACCGGTTGTATTTCCAGCtcc > 2:166385/2‑249 (MQ=255) aTTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcc < 1:301639‑M1/250‑66 (MQ=255) tttCCCCTCGAACAATTTTTAAGCCGTAGATAAACAGGCTGGGCCACTTCACATGAGCGCAAAATACATCGTCACATGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGAGCGTTACTGGAGCGTGAACTGGGGATTCGTCCTGTCGATACCGTTTGGAGTTCCAACTACGATCACGAcc > 2:28360/1‑250 (MQ=255) tcccaccgaacacTTTGTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACAGCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgct < 2:281669‑M1/244‑70 (MQ=255) ccccTCGAACACTTTTTAAGCCGTAGATAACCAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCAGGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCGGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGACAAcc < 1:197225/251‑1 (MQ=255) acacTTTGTAAGCCGTAGATAAACCGGCTGGGTAACTGCACATGATCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACGTATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTGAGCCGTGGCGTTCTTGTGCCGGGTGCGTTTCGGGCTCGTTAACGGGTTATTCGGCATTTCGATACCGTTTGTATTTCCATCTACGAGCACGACAACCAGCGCGAg < 2:288595/251‑1 (MQ=255) acTTTTTGAGCAGTAGAAAAACAGGCTGGGGAACTTCACATGAGCGAAAAATACATCGCAACCAGAGACATGTTGAAGATCAATGCCCGTATACTAGCAAGCCGACTGATGCCTTCTGAACGATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGAAACTGGTGGGTGTCTGGGCCGTTAACTGGGGATTTGTCATAGCGATACCGTTTGTATTTCCAGCTCCCATCACggcacacatggcgcgct > 2:291623/1‑235 (MQ=255) ttttAAGCCGTAGATAAACAGGCTGGGATACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGACAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctttcgggggatcccgctggattg > 1:299191‑M1/1‑167 (MQ=255) ttttAAGCCGTAGATAAACAGGCTGGGATACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCGGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattg < 2:299191‑M1/242‑76 (MQ=255) aGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATAGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaccttcagccgcaatatcgatccgctggtagaggcgggcgatcggggggccccgctggattgtccggggtgggggg > 1:152021‑M1/1‑162 (MQ=255) gCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggggatcctgctggattggccgggttgggggc > 1:128048‑M1/1‑161 (MQ=255) aaaCAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGACAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAAATGGGTATTCGTCATGGCGATACCGTTTGTATTTCCAGCTACGATTACGACCAAAAGCGCGAGCTTAAAGTAGTGCAACgcgc > 1:230341/1‑251 (MQ=255) aGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCAAGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCAGTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattgtccgggttggggcaagagcgattcggtc < 2:69843‑M1/251‑104 (MQ=255) acacTTCACATGCGCGAAAAATACATCGTCACCCGGGTCATGTTGCAGATCCCTGCACGTACACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGACTGGTACCGGGTGCGTTACTGGCGCGTGAACCGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGACAACCAGCGCGCGCTTAAAGTGCTGAAACGCGCAGAAGGCGATgg > 2:152381/1‑251 (MQ=255) acaTGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACg < 1:108169/192‑1 (MQ=255) acaTGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGGATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACg > 2:108169/1‑192 (MQ=255) aGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattgtccgggttggggcaagagcgattcggtcgttaatagtggttcgcgatc < 1:114514‑M1/251‑124 (MQ=255) aaaaaTACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCACGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGGATTCGTCATGTCGCTTCCGTTTGTTTTTCCAGCTACGATCACGACAACCAGCGCGGGCTTAAAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGACTCATCGtt > 2:203263/1‑251 (MQ=255) cGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattgtccgggttggggcaagggctattgggtcgttaatagtgggtcgcgatcggatcttagtgcac < 1:50894‑M1/251‑138 (MQ=255) cACCTGGGACAGGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattgtccgggttggggcaagagcgattcggtcgttaatagtggttcgcgatcggatcgtaatgcacgaa < 2:128048‑M1/251‑141 (MQ=255) ccTGGGACATGTAGCAGATACATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGCTACTGGCGCGGGAACTGGGGATTCGTCATGTAGGTACCGTTTGTATTTACAGCAACGATCAAGACAACCAGCGCGAGCTTAAAATGATGAAACGCGCAGGAGGCGAAGGCGAGGACTTCATCGTGATTGATGACCtggtg > 2:221386/1‑251 (MQ=255) tCGCAAGACGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGGGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGACAACCAGCGCGAGCTTAAAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCATCGTTATTGATGACCTGGTGGATACCGGGGGTACTGCGGTTGCGATTCGTGa > 1:227837/1‑250 (MQ=255) aaGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGAAGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGAGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGCCAACCAGCGCGAGCTTAAAATGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCATCGTTATTGATGACCTGGTGGATACCGGTGGTACTGCGGTTGCGATTCGTGAAATGt > 1:142758/1‑251 (MQ=255) ccGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACCGGGTATTCGTCATGTCGAAACCGTTTGTATTTCCCGCTACGATCACGACAACCAGCGCGCGCTTACAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCCTCGTTATTGATGACCTGGGGGAGACCGGTGGTACTGCGGTTGCGATTCGTGAAATGTATc > 2:101416/1‑251 (MQ=255) aCTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCGGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattgtccgggttggggcaagagcgattcggtcgttaatagtgggtcgctatcggatcttaatgcacgaatcctgagaagcgtggtggatcaactggatatcgccaaaatccacc < 1:204464‑M1/251‑186 (MQ=255) gATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattgtccgggttggggcaagagcgattcggtcgttaatagtggttcgcgatcggatcttaatgcacgaatcctgaaaagcgtggtggatcaactggatatcgccaaaatccacctg < 1:168034‑M1/250‑188 (MQ=255) ggCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGACAACCAGCGCGAGCTTAAAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCATCGTTATTGATGACCTGGTGGATACCGGTGGTACTGCGGTTGCGATTCGTGAAATGTATCCAAAAGCGCACTTTGTCACCATCTTCGc < 1:202225/251‑1 (MQ=255) aaGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGACAACCAGCGCGAGCTTAAAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCATCGTTATTGATGACCTGGTGGATACCGGTGGTACTGCGGTTGCGATTCGTGAAATGTATCCAAAAGCGCACTTTGTCACCATCTTCGCAAAACCGGCTGgtc < 1:273871/251‑1 (MQ=255) ggCGGTCTGGTACCGGGGGCtactggctgtgcgaacttcagccgcaatatcgatccgctgttataggcgggctatcggttgatcctgcttgagtgtccgggttgtggcaagagctattcggtcgttaatagtggttcgcgatcggagcttaatgcacgaatcctgaaaagcgtggtggatcagctggatatcgccaaaatccaccttctgggcaactcgatgggtggccatagttctgttgcgttcgccc < 2:189296‑M1/250‑231 (MQ=255) | CATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGACAACCAGCGCGAGCTTAAAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCATCGTTATTGATGACCTGGTGGATACCGGTGGTACTGCGGTTGCGATTCGTGAAATGTATCCAAAAGCGCACTTTGTCACCATCTTCGCAAAACCGGCTGGTCGTCCGC > NC_000913/255870‑256337 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |