Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	637,705	(T)7→8	intergenic (‑87/+122)	ybdO ← / ← dsbG	putative LysR family DNA‑binding transcriptional regulator YbdO/protein sulfenic acid reductase and chaperone DsbG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	637,705	1	.	T	100.0%	24.2 / NA	8	intergenic (‑87/+122)	ybdO/dsbG	putative LysR family DNA‑binding transcriptional regulator YbdO/protein sulfenic acid reductase and chaperone DsbG
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base T (5/3);  total (5/3)

GTCATTAAATTGCGCACGTAAGCGTTGTAACGACTGGCTCACGGCTGATGGGGTGATATATAGTGATTCAGCAGCTTTGCTAATGCTTAAATGCTGGTAAATACACTCAAATATGACAAGAAGATTTAAGTCGAACTTTTTCAAGTCGTAGAGATTGGCCATACACTACTCCGGTTATATTTTTCTTCCATGATATATTCACTTAATCAATGTTTTTTGCGTATATATTTTTATTGATTATGTTTTTTT‑GCTTAACTCAGGATTAAGTTTTTCTAAAATAGCACAGCCACTTAGGGCAGAGCGAGCAATTCATGCTTTTTTAGGATGGTTGAAAAGCAGGGATATAGTTCAACCATCCATGAATTACCTTTTATTTATTCCCCATAATGATATTAAGCGTTTTCTGATCGGGCAACCCC  >  NC_000913/637457‑637875                                                                                                                                                                                                                                                          |                                                                                                                                                                           gTCATTAAATTGCGCACGTAAGCGTTGTAACGACTGGCTCACGGCTGATGGGGTGATATATAGTGATTCAGCAGCTTTGCTAATGCTTAAATGCTGGTAAATACACTCAAATATGACAAGAAGATTTAAGTCGAACTTTTTCAAGTCGTAGAGATTGGCCATACACTACTCCGGTTATATTTTTCTTCCATGATATATTCACTTAATCAATGTTTTTTGCGTATATATTTTTATTGATTATGttttttttg                                                                                                                                                                           >  1:102310/1‑249 (MQ=255)                      gCGTTGTAACGACTGGCTCACGGCTGATGGGGTGATATATAGTGATTCAGCAGCTTTGCTAATGCTTAAATGCTGGTAAATACACTCAAATATGACAAGAAGATTTAAGTCGAACTTTTTCAAGTCGTAGAGATTGGCCATACACTACTCCGGTTATATTTTTCTTCCATGATATATTCACTTAATCAATGTTTTTTGCGTATATATTTTTATTGATTATGTTTTTTTTGCTTAACTCAGGATTAAGtttt                                                                                                                                                      >  1:203394/1‑251 (MQ=255)                             aaCGACTGGCTCACGGCTGATGGGGTGATATATAGTGACTCAGCAGCTTTGCTAATGCTTAAATTCTGGTAAATACACTCAAATATGACAAGAAGATTTAAGTCGAACTTTTTCAAGTCGGAGAGATTTGCCATACACTACTCCGGTTATATTTTTCGTCCATGATATATTCACTTAATCAATGTTTTTTGCGGATATATTTTTATTGATTATGTTTTTTTTGCGTAACTCAGGATTAAGTTTTTCTaaa                                                                                                                                                <  1:179240/250‑1 (MQ=255)                                                                         agcTTTGCTCATGCTTAAATGCTGGTAAATACACCCCAATATGACAAGACGATTTAAGTCGAACTTTTTCAAGTCGTAGAGCTTGGCCATACACTACTCCGGTTATATTTTTCTTCCATGATATATTCACTTAATCAATGTTTTTTGCGTATATATTTTTATTGATTATGTTTTTTTTGCTTAACTCAGGATTAAGTTTTTCTAAAATAGCACAGCCACTTAGGGCAGCGCGAGCAATTCATGCtttttt                                                                                                    >  2:253851/1‑250 (MQ=255)                                                                         agcTTTGCTAATGCTTAAATGCTGGTAAATACACTCAAATATGACAAGAAGATTTAAGTCGAACTTTTTCAAGTCGTAGAGATTGGCCATACACTACTCCGGTTATATTTTTCTTCCATGATATATTCACTTAATCAATGTTTTTTGCGTATATATTTTTATTGATTATGTTTTTTTTGCTTAACTCAGGATTAAGTTTTTCTAAAATAGCACAGCCACTTAGGGCAGAGCGAGCAATTCATGCtttttt                                                                                                    >  1:55325/1‑250 (MQ=255)                                                                                  aaTGCTTAAATGCTGGTAAATACACTCAAATATGACAAGAAGATTTAAGTCGAACTTTTTCAAGTCGTAGAGATTGGCCATACACTACTCCGGTTATATTTTTCTTCCATGATATATTCACTTAATCAATGTTTTTTGCGTATATATTTTTATTGATTATGTTTTTTTTGCTTAACTCAGGATTAAGTTTTTCTAAAATAGCACAGCCACTTAGGGCAGAGCGAGCAATTCATGCTTTTTTAGGATGGtt                                                                                           <  1:63668/250‑1 (MQ=255)                                                                                                    aatacatccAAATATGACAAGAAGATTTAAGTCGAACTTTTTCAAGTCGTAGAGATTGGCCATACACTACTCCGGTTATATTTTTCTTCCATGATATATTCACTTAATCAATGTTTTTTGCGTATATATTTTTATTGATTATGTTTTTTTTGCTTAACTCAGGATTAAGTTTTTCTAAAATAGCACAGCCACTTAGGGCAGAGCGAGCAATTCATGCTTTTTTAGGATGGTTGAAAAGCAGGGATATAGtt                                                                        >  1:87951/9‑251 (MQ=255)                                                                                                                                                                 aTACACTACTCCGGTTATATTTTTCTTCCATGATATATTCACTTAATCAATGTTTTTTGCGTATATATTTTTATTGATTATGTTTTTTTTGCTTAACTCAGGATTAAGTTTTTCTAAAATAGCACAGCCACTTAGGGCAGAGCGAGCAATTCATGCTTTTTTAGGATGGTTGAAGAGCAGGGATATAGTTCAACCATCCAGGAATTACCTTTTATTTATTCCCCATAATGATATTAAGCGTTTTCTGATCg           <  2:203394/251‑1 (MQ=255)                                                                                                                                                                          tCCGGCTATATTTTTCTTCCATGATATATTCACTTAATCTATGTTTTTTGCGTATATATTCTTATTGATTATGTTTTTTTTGCTTAACTCAGGATTAAGTTTTTATAAAATAGCACAGCCACTTCGGGCAGAGCGAGCAATTCATGCTTTTTTAGGATGGTTGAAAAGCAGGGATATAGTTCAACCATCCATGAATTACCTTTTCTTTATTCCCCATAATGATATTACGCGTTTTCTGATCGGGCAAcccc  >  2:160496/1‑251 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                           GTCATTAAATTGCGCACGTAAGCGTTGTAACGACTGGCTCACGGCTGATGGGGTGATATATAGTGATTCAGCAGCTTTGCTAATGCTTAAATGCTGGTAAATACACTCAAATATGACAAGAAGATTTAAGTCGAACTTTTTCAAGTCGTAGAGATTGGCCATACACTACTCCGGTTATATTTTTCTTCCATGATATATTCACTTAATCAATGTTTTTTGCGTATATATTTTTATTGATTATGTTTTTTT‑GCTTAACTCAGGATTAAGTTTTTCTAAAATAGCACAGCCACTTAGGGCAGAGCGAGCAATTCATGCTTTTTTAGGATGGTTGAAAAGCAGGGATATAGTTCAACCATCCATGAATTACCTTTTATTTATTCCCCATAATGATATTAAGCGTTTTCTGATCGGGCAACCCC  >  NC_000913/637457‑637875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑