| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,430,310 | C→T | A421V (GCT→GTT) | stfR → | putative prophage side tail fiber protein StfR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,430,310 | 0 | C | T | 93.2% | 170.3 / NA | 61 | A421V (GCT→GTT) | stfR | putative prophage side tail fiber protein StfR |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (21/34); minor base G (2/2); total (25/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAAGGCTGGCGAAGCCACTGAACAGGCCAGCGCAGCAGCGAGGTCTGCTTCCGCAGCGAAGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGCTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAATCAGCCTATGACAATGCAGAGAAACGTCTGCAGAAA > NC_000913/1430065‑1430554 | gaaggcgcgtgAAGCCACTGAACAGGCCAGCGCAGCAGCGAGGTCTGCTGCCTCAGCGAAGACATCCGAACCGAACGCAAAAGCGTCGGAAACAAGCGCAGAATCCACAAAAACGGCTTCCGCATCGTCAGCCAGTTCGGCTGCGTCATCGGCTTCAGCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGttgctg < 2:156207/241‑1 (MQ=255) cGAAGCCACTGAACAGGCCAGCGCAGCAGCGAGGGCTGCTTCCGCAGCGAAGCCATCCGAAACGACCGCGAAAGCGCCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCACATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGa < 2:119594/251‑1 (MQ=255) gAAGCCACTGAACAGGCCAGCGCAGCAGAGAGGTCTGCTTCCGCAGCGAAGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGAGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTAGGCGGCGTCATCGACATCATCGGCGTCTGCTTCAAAAGAT‑AGGACGACCCGACAAGCGTCAGCAGCGCAAG‑GCAGCGCACCGACGGCCTCCACACAGTCGACC‑GAGGATGCTGGAAGGGCGa > 2:356434/1‑250 (MQ=255) gcaccTGAACAGTCCAGCGCAGCAGCGAGGTCGTCTTCCGCAGCGAAGACACCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCAGCGTCAGCAAGTTCGGCGGCGTCATCGGCATCATCGGCGTCGGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGAcggc < 2:466055/247‑1 (MQ=255) gAACAGGCCAGCGCAGCAGCGAGGTCTGCTTCCGCAGCGAAGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGc > 1:488000/1‑251 (MQ=255) cgtccaggacagccgCGAGGCCTGCTCCCGAAGCCAAGACCTCCGAAACTAACCCGAAAGCGTCTGAAACAAGCGCACAATCCTCAAAACCGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAATCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCag < 2:141815/242‑1 (MQ=255) ggCCAGCGCAGCAGCGAGGTCTGCTTCCGCAGCGAAGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCAGCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGGGCGACGGCGGCAGCTCaga < 2:113010/251‑1 (MQ=255) gCCAGCGCAGCAGCGAGGTCTGCTTCCGCAGCGAAGCCATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGGCATCGGCATCATCGGCGTCTGCTTCAAAAGGTGGGG‑CGACCAGACAAACGTCAGCAGCG‑AAGAGCAGCGCCACGCAGGCCTCCACGAACGCGCCA‑GAGGATGCTGGCAGAGCGCCGGAGGCAGccccg > 2:59400/1‑245 (MQ=255) gcagcaGCGAGGTCTGCTTCCGCAGCGAAGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAg < 1:455060/251‑1 (MQ=255) gAGGTCTGCTTCCGCAGCGAAGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCCTCGGCGTCTGCTTCCAAAGATGGGG‑CGACCCGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GCGGTTGCTGGCAGAGCGGCGGCGGCCGCTCAGGGCCAAAGAAaggcgg > 2:193171/1‑251 (MQ=255) gttCTGCTTCCGCAGCGAAGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGATCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAACAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGAAGCGCCAAGCCAGCATCCACGAAGGC‑ACACGCGGGTGCGGGCAGCGCGGCAGCGGCCGCTCATAGCAAACGGACGGCGGa > 2:9561/3‑250 (MQ=255) ggCTTCCGCAGCGAAGACATCCGAAACGAACGAGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGAAGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCcg < 1:28895/250‑1 (MQ=255) gtttCCGCAGCGAAGCCATCAGAAACGAACGCGAAAGCGGCGGAAACTAGCGCAGAATCCTCAAAAACGGCGTCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCAGCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATc < 2:15967/246‑1 (MQ=255) ccGCAGCGAAGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAGAGTACGGCGGAATCCGCGGc > 1:175674/1‑250 (MQ=255) cAGCGAAGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAAcg < 1:387216/251‑1 (MQ=255) aaGACACCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAACCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACgcgcgc < 2:194683/251‑1 (MQ=255) aGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCGGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCAGCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGcc < 2:556347/251‑1 (MQ=255) gACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCg > 1:216043/1‑251 (MQ=255) cGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGAcag < 1:395590/251‑1 (MQ=255) gaacgCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCt > 1:540523/1‑250 (MQ=255) cgctaaaGCGTGCGAAACTAGCTCAGAAGCCTCTAACACGGCTGCCGCACCGTCAGCCAGTACGGCGGGGTCAGCGGCATCATCGGCGACTGCCTCAAAAGATGAGG‑CGACCAGACAAGGGGCAGCAGCG‑AAGAGCAGCGCCACGACGGCCTCCACGAAGGCGACA‑GAGGTTGCTGGCCGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGTCAG‑CAGCTAAAc < 2:318905/247‑1 (MQ=255) aaGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGGAGCGCCACGCCAGCATCCACGAAGGCGACA‑GAGGTTGCTAGCAGTGCGACGGCGGCAGCTCAGCACAAAAGTACGGCGGAGAACGCGGCAAcgcgagcacagaacggccgaaagacggcc > 2:303954/1‑226 (MQ=255) tgCGTCGAAAACAATCGAAGAATCCTCAAAAACGGCGGCCACATCGTCAGCAAGATCGGCGGCGTCATCGGCATCATCGGCGTCTGCGTCAAAATATGAAG‑CGACCAAACAAGCGTCAACAGCG‑AAGAGCAGCGCCACGCCGACATCCACGAAAGCGACA‑GAGAGTGCTGGCAGTGCGCGGGCGGCAGCTCAGAGCACAAGTACGGCGGAATCGACAGGAACGCGCGACGAGTCAG‑CGGCTacaaggaccg > 2:82947/2‑242 (MQ=255) aGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGAAAG‑CAGCTAAACGGG‑c > 1:237114/1‑249 (MQ=255) cGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑Cagag < 1:303067/251‑1 (MQ=255) cGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGa > 1:553297/1‑250 (MQ=255) cGGAAACAAGCGCAGAAGCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGat < 1:55618/251‑1 (MQ=255) aCAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGGATCCGCGGCACAGCGCGCCGAGACAG‑AAGCTAAAAGGG‑Ccgagagaattgc > 2:73098/1‑243 (MQ=255) aGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATc < 1:9561/251‑1 (MQ=255) aaaaaCGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCCGAGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAAAGCGCGCCGGGACAG‑CAGCCAAACGGG‑CCGGGGCTATTGTATACGCCGGGGCCCTTg > 2:60592/1‑251 (MQ=255) ggCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATg < 1:572291/251‑1 (MQ=255) cTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGc > 1:307390/1‑250 (MQ=255) tGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATACTCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCAGAATCCGCGGCCACCCGCGCAGAGACAG‑CAGCTACAAGGG‑CAGAGGATATTGCATCCGCCGGGGCGCTTggtgatgta > 2:495119/1‑242 (MQ=255) gCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGAATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAg < 1:43343/251‑1 (MQ=255) cATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCAGCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTacg < 1:341161/251‑1 (MQ=255) aGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGaaaa < 1:67483/251‑1 (MQ=255) tCGGCGGCGTCATCGGCATCATGGGCGGCGGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCAGGACGGCATCCCCGAGGGCGACA‑GAGGGTGCTGGCAGGGCGACGGCGGCAGCGCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGa < 2:154986/250‑1 (MQ=255) catcGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCg < 1:438271/251‑1 (MQ=255) tGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTg > 1:103733/1‑92 (MQ=255) tGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCACCCACGAAGTCGACA‑GAGGTTGCTGGCAGTg < 2:103733/92‑1 (MQ=255) gCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑AGGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGGGCGACCAACAGTAc > 2:188699/1‑251 (MQ=255) tCAAAAGATGAGG‑CGACCAGACAAGCGGCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAAGCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAGACGGG‑CAGGGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑g < 1:233244/249‑1 (MQ=255) aaaggAGG‑CGTCCAGAAAAGCGCCAGCAGCG‑AAGCACAGCGCCACGACGGCCTCCACGAAGGCGACA‑GAGGTTGCGGGAAGTGCGACGGCGGCAGCTCAGAGAAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CATAGGATATTGCATCCGCCGTGGCGCGTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGaaa < 2:540523/247‑1 (MQ=255) gATGAGG‑CGACCAGACACGCGTCAGCAGCG‑AAGAGCAGAGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATACGCGGCAAAGCGCGCCGCTACAGACA‑CTAAAAGGG‑CAGAGAATATTGCATACGCCGTAGCGCTTGCGGATGCAAGTACGACGAAAAAGGGGAAAGTACCGCTCAGC‑AAGGCCACCAACatgccgtatggaa > 2:184642/1‑238 (MQ=255) gATGAGG‑CGACCAGAAAAGCGACAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACTAAGGCGACA‑GAGGTTGCGGGCAGTGCGACGGCGGCAGCTCAGAGCAAGAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAAc < 2:175674/251‑1 (MQ=255) gAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCCGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTGGATGGCAGTGCGACGGCGGCAGCTCAGAGAAAAAGTACGGCGGATTCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCt < 2:465004/251‑1 (MQ=255) g‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTggc < 1:57732/251‑1 (MQ=255) aGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAAc > 1:97309/1‑251 (MQ=255) aaGCGTCAGCAGCG‑AAGAGCAGCGCCACGTCGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCCCGCCGAGCCAG‑CAGCTAACAGGG‑CCGAGGATATTGCATCCGCCGGGGCGCTTGAGGCTGACAGTCAGACGAAAAAGGGGATAATACGACACCGCCAG‑GCGACCACCAATAC‑TTCTGAAACGCTAGCGGCAACGcc > 2:443588/1‑250 (MQ=255) aaGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCa < 1:193171/251‑1 (MQ=255) cagcagCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCa < 1:169144/251‑1 (MQ=255) agag‑AAGAGCAGAGCCACGAAGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGCCGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATACGCGGAAACGCGCGCCGAGCCAG‑CAGATAAAAGGGACGGAG‑AGTTTGAATCCGCCGTGGCGCTTGAGGATGCAAGAACGACGAAAAAGGGGTTAGTACAGCTACGA‑CGTGCGAACAAAAG‑ACAGACTGAAACGCTGGCGGTAACGCCacagaaggta > 2:9108/4‑241 (MQ=255) gcG‑AAGAGCAGCGCCAAGACGGCATCCACGAAGGCGACA‑GAGGGTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGGGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTaaa < 1:449626/251‑1 (MQ=255) g‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAAt > 1:478816/1‑251 (MQ=255) cagcGCCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAATCAGCCt < 1:516803/251‑1 (MQ=255) gcCACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAATGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAATCAGCCTATGa < 1:339812/251‑1 (MQ=255) cACGACGGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAATCAGCCTATGACa < 1:159573/251‑1 (MQ=255) gacgGCATCCACGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAATCAGCCTATGACAATg > 1:108950/1‑251 (MQ=255) cGAAGGCGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAATCAGCCTATGACAATGCAGAGAAACGt < 1:80298/251‑1 (MQ=255) cGACA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAATCAGCCTATGACAATGCAGAGAAACGTCTGc > 1:46981/1‑249 (MQ=255) aCA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAATCAGCCTATGACAATGCAGAGAAACGTCTGCAGaa < 1:131637/251‑1 (MQ=255) cA‑GAGGTTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAATCAGCCTAGGACAATGCAGAGAAACGTCTGCAGaaa < 1:495119/251‑1 (MQ=255) | GAAGGCTGGCGAAGCCACTGAACAGGCCAGCGCAGCAGCGAGGTCTGCTTCCGCAGCGAAGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGG‑CGACCAGACAAGCGTCAGCAGCG‑AAGAGCAGCGCCACGACGGCATCCACGAAGGCGACA‑GAGGCTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAG‑CAGCTAAACGGG‑CAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGC‑AGTGCGACCAACAGTAC‑GTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAATCAGCCTATGACAATGCAGAGAAACGTCTGCAGAAA > NC_000913/1430065‑1430554 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |