| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,636,925 | G→C | R77P (CGC→CCC) | creC → | sensory histidine kinase CreC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,636,925 | 0 | G | C | 98.1% | 169.5 / NA | 53 | R77P (CGC→CCC) | creC | sensory histidine kinase CreC |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (26/26); total (26/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
GAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCGC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACG > NC_000913/4636684‑4637164 | gAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTTCTGGGCTGTTTTTTACTGGTGGAGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAGCGTTGCTGGCGGAGCTGGGGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGTGTTTAATCAGCTACAACA‑TCCC‑CCtttt < 2:429960/249‑1 (MQ=255)gAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTcg < 1:241203/251‑1 (MQ=255) ggggCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTcgcg < 1:92351/251‑1 (MQ=255) gTAATGCGTATCGGCAGGCGGTGGTTTGTGGGCTATTTTTTCTTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCTTTCTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAGCGGAGGGGACGTTGATCTACACCGCACCGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGTGACCCAACGCATGGGCAACTGGCGCAGGCTGTTAATCAGCTACAACA‑TCCC‑CCTTTTCGCGCCAata < 2:190539/250‑1 (MQ=255) aaTGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATc < 1:90631/250‑1 (MQ=255) cGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCAtt < 1:187893/250‑1 (MQ=255) ggCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGACGGCGATGGCGGGTCCCGATTTGCTATCTGGGGACCCACAGCCTGGGCAACCGGCGCAGGCGCTGAATCAGCCACCACA‑TCCA‑CCGTTTCCCCCCAATATCGGTGGCCTTa > 2:430359/1‑250 (MQ=255) gCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGGCACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTTGCGCAGGCGATTAATCAGCTAACACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTaa > 1:402348/1‑250 (MQ=255) gctgttgttGCTGGGCTTTTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTTATGGCCATTTTTGTAAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACa‑aa < 2:195013/247‑1 (MQ=255) gCTGGTCTATTTTTTATTGGTGGCGGTGGCTGCCTGGTTCGTACTGGCCAGTTTTGTCAAAGAAGGTAACCCGGGCGTGCTGAGAGCAACGGAGGGGACGTTGAGCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACTCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAAt < 2:252712/250‑1 (MQ=255) gggCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGa < 1:151091/249‑1 (MQ=255) ttttACTGGTGGCGTTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAATGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGTCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGt < 1:23497/250‑1 (MQ=255) cTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGAGCGCAATGAATATccaggctatat > 1:244997/1‑241 (MQ=255) ggcggtggcAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGAcc < 1:54094/250‑1 (MQ=255) gcggtggcAACCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGACGGCGCGTCCCGCTTTGCTCTCTGGGGACCCAACGCATGGGCCACTGGCGCCAGCGTTTAATCAGCTACAACA‑TCCC‑CCGATTCGCGCCAATCTCAGTGGCATTA‑CACAAGTGCCCAATAGATATCATTTCTATATGaacg > 2:332174/1‑247 (MQ=255) gatggcAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGAAGGGGACGTTGATCGACACCGCAACGTTGCTAGCGGAGCTGGCGCGTCACGATTTGCTCTCCGGGGACCCAACGCCTGGGCAAATGGCACCGGCGTTTAATCAGCTAATACA‑TACC‑CCGTGTCGCGCCAAAATCGGTGGCAATCACA‑AAATGCGCAACGAATATCATGTCTATATgcacgatg > 2:289331/3‑244 (MQ=255) gCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCGGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAggg < 1:183578/251‑1 (MQ=255) gCCTGGGTCGTGCTTGCCAGTTTTGTCAAAGAAGTTAAAACGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATAGCATGTCTATATGACCGATGCGCAggg < 2:3242/251‑1 (MQ=255) cTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTACTGGCGGAGCTGGCGCGGCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACTACA‑TCCC‑CCGTTTCGCGCAAATATCGGTGGCATTACCA‑AGATGCGCAATGAATATCATGGCTAAATGACCGATGCGCAggga > 2:123164/1‑249 (MQ=255) ggTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCaaa < 1:220063/251‑1 (MQ=255) ttCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCAAGTCTATATGACCGATGCGCAGGGCAAAgg > 1:390900/1‑250 (MQ=255) gacttgCCATTTTTGTCAAAGAAGTTATACCGGGCGTGCGAAGAGCAACGGAGGTGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCGGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGGTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCATGGCAAAGTATTg < 2:383504/246‑1 (MQ=255) aCTGGCCGTTTTTGTCAAAGCAGTCAAACCGGGCGTGCGAAGAGCATCGGAGGGTACGTTGATCGACACCGTATCGTTGCTGGCGGAGCTGGCGCGTCCCGAGTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGTGCCAATATCGGTGTCAATAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTg < 2:73274/250‑1 (MQ=255) gTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCaaa < 1:430359/251‑1 (MQ=255) tCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAAt > 1:295223/1‑251 (MQ=255) aaaGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCATCTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATGAACA‑AAGTGCGCAATGAATATCATGTCTATAGGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATaa < 1:521970/251‑1 (MQ=255) aagTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGGCCCAACGCATGGGCAACTGGCGCCGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGAGCCCATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATACGCAGGGCAAAGTATTGTTCGATTCGTCAAATAAAgac > 2:222881/1‑249 (MQ=255) agTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCg > 1:383863/1‑251 (MQ=255) tAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGtt < 1:125187/250‑1 (MQ=255) gggCGTGCGAAGAGCACCGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGAATTGTTCGATTCGGCAAATAAAGCCGTTGGACAgg > 1:429743/1‑251 (MQ=255) cGTGCGAAGAGCGACGGAGGGGACGTTCATCGACTCTTCACTGTTGCTGGCGGAGCGGGCGCGTCCCTAGTTTCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAAGATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGatt < 2:429743/251‑1 (MQ=255) gggCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGa < 2:245592/219‑1 (MQ=255) gTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGa > 1:245592/1‑221 (MQ=255) gAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCTTTTCGCGCCAATATCGGTGGCATTAACA‑AAGGTCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTGTTcc > 2:158390/1‑250 (MQ=255) aaGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCa > 1:356138/1‑198 (MQ=255) cGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAACTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGGGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAAt > 1:21067/1‑251 (MQ=255) gTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGc > 1:46501/1‑251 (MQ=255) ttGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGCCAGGATTATTCGCGCTGGACTGACGTCTAGCt > 1:346840/1‑251 (MQ=255) ttGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGAATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCt > 1:142670/1‑251 (MQ=255) aTCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAAc > 1:344247/1‑251 (MQ=255) acCGCAACGTTGCTGGCGGAGCTGGCGCGACCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTTACA‑AAGTGCGCAATGAATATCATTTCTATATGACCGATGCGCAGGGACAAGTATTGTTCGATCCGTCAAATAAAGCCGTTGGACCGGGTTATTCGCGATGGAATGACGTCCGGCTAACGGTGCg > 2:265670/1‑251 (MQ=255) cAACGTTGCTGGCGGAGCTGGCGCGTCCCGCTTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGtttcgaggg > 2:22938/1‑244 (MQ=255) gTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGt < 1:107643/251‑1 (MQ=255) gggtggagacgacgggTCCCGATTTACACTCTGGGGCCCAAACGCATGGGCAACTGGTGAAGGCGTTTAATCAGCTACAACA‑T‑GCTCTGTTTAGCGCCAAGACCGGTGGCATAAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGCAGGGTTCGATTCGGTAAATAAAGCCGTTGGACAGGATTATTCGCGTTGGAATTACGTCTGGCTAACATTGCGTGGTCATTATGGt < 2:207271/236‑1 (MQ=255) gCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGACTATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAAAGTTGCATGGTCAGTATGGTgcgcgcc > 2:427151/1‑250 (MQ=255) cTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTgcgcgc > 1:117592/1‑249 (MQ=255) gTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTg > 1:329168/1‑251 (MQ=255) ctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCGTTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCg < 1:444163/249‑1 (MQ=255) gggACCCAACACTGGGGAAACTGGCGAAGGCGGTGAATCAGCTACA‑CACTCCT‑CCTTTTCGCGCCAAGATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCAGGTGTATATGACCGTTGCGCAGGTCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGAGAGGATTATTCGCGCTGGAATGCCGTCTGGCTAACGTTGCGTGGTCAGTATGGTTCGCGCAGCACTTTGCAAAATCCTGCCGATccc < 2:402348/251‑1 (MQ=255) aaCGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCCAAAGtt > 1:137269/1‑251 (MQ=255) cgcAGGGGATTAATCAGCTACCACA‑TCCC‑CCGGTTCGCGCCAATATCGGTGGCATTAACA‑AAGCGCGCAAGGAAGAGCATGTCTATATGACCGATGCGCAGGGCAAATTATTGTTCGATTCGGCAAATAAAGCCGTGGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAATTTCTGTGATGTATGTTGca < 2:213748/251‑2 (MQ=255) cgcAGGCGTTTAATCAGCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGcc < 1:370520/251‑1 (MQ=255) gCTACAACA‑TCCC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGCTCCCGAACGTTCTGTGATGTATGTTGCCGCACCGATTATGGACg > 1:241385/1‑251 (MQ=255) | GAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACA‑TCGC‑CCGTTTCGCGCCAATATCGGTGGCATTAACA‑AAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACG > NC_000913/4636684‑4637164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |