| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,524,596 | C→T | D139N (GAT→AAT) | yjhH ← | putative 2‑dehydro‑3‑deoxy‑D‑pentonate aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,524,596 | 0 | C | T | 95.7% | 204.0 / ‑2.5 | 69 | D139N (GAT→AAT) | yjhH | putative 2‑dehydro‑3‑deoxy‑D‑pentonate aldolase |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base T (26/40); total (27/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
AGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGCCCAGCAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGC > NC_000913/4524355‑4524838 | agTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGCTCAGCAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATAGTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGtt < 1:254907/251‑1 (MQ=255) cGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGCTCAGCAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACa < 2:209405/251‑1 (MQ=255) aaggtAGCGCTGGCGGTTATCGCACCGTCGCCGCTCAGCAGCATCGTATTCAGCAAATGATAATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTTCAGGATCAc < 2:127818/247‑1 (MQ=255) cGGTTATCGCACCGTCGCCGCTCAGCAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACg < 1:508455/251‑1 (MQ=255) cACCGTCTCCGCTCAGCAGCATCGTATTCATCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTTATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGGTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGGCCTGTCCCGGCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTGGGGTGACGCTACGGGCg < 2:368330/251‑1 (MQ=255) cccctCGCCGCTCAGCAGCATCGTATTCAGAAAATGATCATCGTAACCGCAGAATACCTAAAACGTCGGTCGTACCTACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGGCGATGGTGTCTTTGATGCCAACGTTATTCTCGTGTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCGTACCCGTCAG‑ATTCGGAAAGGTGTACAGGAACACCGGTAGGGTGACTCTACGGGCGa < 2:443515/247‑1 (MQ=255) cgccgcTCAGCAGCATTGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCCGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATctg < 1:532767/250‑1 (MQ=255) cgctcagcagCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATc < 1:96152/214‑1 (MQ=255) cgctcagcagCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATc > 2:96152/5‑218 (MQ=255) gctccgcagcaTCGTATTCATCAAAATATCATCGGAACCGCAGAATACCGAAAACGACTGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAATTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGTATCACCGGTAGGGTGACGCTTCTGGCGATCTGCTG‑Gt < 2:517076/246‑1 (MQ=255) gctcagcagCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑Gt < 1:394271/248‑1 (MQ=255) cagcagAATCGTATTCAGCAAAGGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGGGACGCTACGGGCGATCTGCTG‑GTAAt < 2:82352/251‑1 (MQ=255) agcagcATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAAt > 1:61579/1‑250 (MQ=255) gcaTCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAgtcg < 1:129306/251‑1 (MQ=255) cAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCgtg > 1:364404/1‑251 (MQ=255) aaaTGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACACGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCgtgg > 1:304889/1‑251 (MQ=255) agcGTAACCGCAGAATACCGAAAACGACGGGCGTACCTACTTAACTGTGGTGATCATCGGACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACtt < 2:481487/249‑1 (MQ=255) tcGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCg > 1:301174/1‑210 (MQ=255) tcGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCg < 2:301174/210‑1 (MQ=255) gtaatcgtaGAATATCGAAAACGACGGGCGTACAGACTGAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGGCGATGGTGGCTTTGATGCCAACGATATTCTCGTGTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTcc < 2:11705/243‑1 (MQ=255) cGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCagtgg > 2:514391/1‑249 (MQ=255) gCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCagtagt > 1:524501/1‑251 (MQ=255) gAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAgg > 1:74088/1‑251 (MQ=255) aTACCGAAAACGACGGGCGTACCGCCTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCCAGGTTTCGTGGTGCGACTTTCCAGTAGTAgggg > 2:155008/1‑251 (MQ=255) gccGAAAACGACGGGGGTACCGACTTAACGGTGTGGATCATCGGACGCAAGTGACCAACGCTGTCGATGGGGTCTGTGATGCCTACGATATTCCCGTTTTTCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGt < 2:482324/249‑1 (MQ=255) ccGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTg < 1:322705/251‑1 (MQ=255) cgacgGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGtagtag > 1:432791/1‑238 (MQ=255) cgacgGGCGTACCGACGTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGtagtag < 2:432791/238‑1 (MQ=255) gacgGGCGTACAGACTTAACTGTGTTGATCATCGTACGAAAGTTACCAACGCTGTCGATGGAGTCTTTGATGCCCACGATATACTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGACAG‑CTTCGGAAAGTTGTACAGGATCACCGGTAGGTTGACGCTTAGGGCGTTCTGCTG‑GTAATAGTCGACAAGATATCGTGGTGCGACTTTCCATTAGTAGGGGTTGATGGcgac > 2:181487/1‑251 (MQ=255) acgGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGcgacg < 1:481721/251‑1 (MQ=255) aCCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCagta < 1:54865/224‑1 (MQ=255) aCCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCagta > 2:54865/1‑224 (MQ=255) cTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTACGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCAGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGGTGATGGCGACGATCCCATCAgcgc > 1:63025/1‑251 (MQ=255) aCTGTGTTTATCATCTCACGCACGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCTTTGTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGTGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTa < 2:165875/251‑1 (MQ=255) atcatcGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGGTGGCGATGATACCATCAGCGACGTAGGCTTgcg > 2:393045/1‑250 (MQ=255) tACGCAAGTGACCAACGCTGTCGATGATGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAACCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAgc > 1:140482/1‑229 (MQ=255) tACGCAAGTGACCAACGCTGGCGAGGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGTCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCTGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAgc < 2:140482/229‑1 (MQ=255) aGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGt > 1:34533/1‑251 (MQ=255) ccAACGCGGGCGAGGGTGTCTTGGATGCAAACGATATTCGCGTTGTGCAGAGCCAGGTGCTGAACGGTTTCCGGTGTTAAGACGAGAGCCGTCAGGATC‑GGAAAGGTTTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGGCAAGATGTCGTGGGGCGACTTTCCAGTAGTAGGCGTGGATGGCGACGATGCCATCAGCGCCGTAGGGTTGCGCATGCGGCGCCCGTTCGAc < 2:193595/251‑1 (MQ=255) cccctattccgatctatcggtGATGCCAACGATATTCTCGTTGTGCAGAGCCAGACTCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGGCAG‑ATTCGGAAAGTTGTACAGGAGCACCGGTAGGGTGACGCTACGGGCGATTTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCCGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGaacg < 2:323135/231‑4 (MQ=255) aaCGCTGTCGATGGTGTCTTTGATGCCAACTATAGTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTTATGGCGACGATACCATCAGCGTCGTAGGCTTGCGCATGCTGCGCCAGTTGGACCg < 1:164829/251‑1 (MQ=255) aaCGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGTTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTGGACCg > 2:418855/1‑251 (MQ=255) cgatGTCGATGGTGTCTCTGATGCCAACGAGATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCt < 2:172984/248‑1 (MQ=255) tGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCg > 1:274576/1‑251 (MQ=255) gATGGTGTCTTTGATGCCAACGATATTCTCGTGTTTCAGAGCCAGCCGCGTCACGGTTTCCGGGGTTAAGGCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGGCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAg < 2:275736/251‑1 (MQ=255) gtgtCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGAGACCATCAGCGCCGTAGGCTTGCGCATGCTGCGTCAGTTTGACCGCTTCGTCAGTGGa < 1:463962/251‑1 (MQ=255) gtCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCg > 1:323135/1‑236 (MQ=255) gATGCCAACGATATTCTCGTGTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAAc < 2:55543/251‑1 (MQ=255) gCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGa < 1:514391/251‑1 (MQ=255) ccAACGATATACTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCAGCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGAc < 2:205381/251‑1 (MQ=255) cAACTATATTCTCGTCTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑AGTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACGTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACg < 2:380416/251‑1 (MQ=255) gatattcaagcattGCAGAGCCAGACGCGTCACGGCTTCCGGGGTAAAGTCCTGACCCGACAG‑ATTCGGAACGTTGTACAGGATCACCGGTAGGGAGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCCCGATTTCGTGGAGAGACATTACAGTAGTAGGGGATGATGGCGACGATAACATCACCCACGTCGGCTTGCGCATGCTCCGCCAGGTTGACCGCTTCGTAAGGGGAAGGGGgacggacggcac > 2:75672/13‑247 (MQ=255) atatTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTgg < 2:169740/232‑1 (MQ=255) atatTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTgg > 1:169740/1‑232 (MQ=255) gccaacagcgTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCTGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGccc < 1:3170/244‑1 (MQ=255) cACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATg < 1:482383/250‑1 (MQ=255) cACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGGGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATgg < 1:135072/251‑1 (MQ=255) gattCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAAACGACGCCAATCAATACCGGCCCTTGCCCGCCGCCAATGGTTAc > 2:183491/3‑251 (MQ=255) tttCCGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTAc > 2:77608/1‑250 (MQ=255) ttcaggggTTAAGGCCGGACCCGTCAG‑ATTCGGAAAGTTGTACTGGTACACTTGTAGGGTGACGCTACGGGCGTTCTGCTGTGTA‑TTGTCGTCAAGATTACGTGGTGCGGCTTTCCAGTAGTAGGTGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCCATACCGGCACTCGCCCGTGGACAATGGTTACa < 2:310015/246‑1 (MQ=255) ccGGGGTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGct > 1:260993/1‑251 (MQ=255) ggggTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGTTAGGGTGACGCGACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTGCCAGTAGTAGGGGTTGATGGCGACGATACCATCATCGCCGTAGGCTTGCGCATGCTGCGCCCGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATCCCGGCACTCGCCCGTCGACAATGGTTACAGcttc < 1:75672/251‑1 (MQ=255) ggggTTAAGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGcttc > 1:456157/1‑251 (MQ=255) aaGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGc > 1:183151/1‑251 (MQ=255) aGTCCTGACCCGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCg < 1:77608/251‑1 (MQ=255) aGTCCTGACCCGTCAG‑ATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGtt > 1:292114/1‑168 (MQ=255) aGTCCTGACCCGTCAG‑ATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCGACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGtt < 2:292114/168‑1 (MQ=255) ccGTCAG‑ATTCGTAAAGTTGTACAGGAGCACCGGGAGGGTGACGCTACGTGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGGGCGACTTTCCAGTAGGCGGGGTTGATTTCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCTTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCGTCTTCGGCGAGTGCCa < 2:61579/249‑1 (MQ=255) cGTCAG‑ATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATgc < 1:393045/251‑1 (MQ=255) | AGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGCCCAGCAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAG‑ATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG‑GTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGC > NC_000913/4524355‑4524838 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |