| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,524,401 | C→T | G204S (GGC→AGC) | yjhH ← | putative 2‑dehydro‑3‑deoxy‑D‑pentonate aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,524,401 | 0 | C | T | 90.9% | 149.6 / ‑2.3 | 68 | G204S (GGC→AGC) | yjhH | putative 2‑dehydro‑3‑deoxy‑D‑pentonate aldolase |
| Reads supporting (aligned to +/- strand): ref base C (6/0); new base T (19/41); total (27/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.95e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCTTCAGATGCTTCAAGAATCGGTGGTAAGCAATATGTCTCTACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑CCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTG > NC_000913/4524160‑4524644 | tcttcAGATGCTTCAAGAATCGGTTGTAAGCAATATGTCTCTACAGGCAGCCCGACACACTGCATGCTGTAGTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCTGTTGTAGTAGTTTTTTATTCAGCGTCTCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGTCGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAg‑cagca < 1:547635/250‑1 (MQ=255) tcAGATGCTTCAAGAATCGGTGGTAAGCAATATGTCTCTACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCg < 1:218246/250‑1 (MQ=255) cAGATGCTTCAAGAATCGGTGGTAAGCAATATGTCTCTACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGCGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCgg > 1:482324/1‑249 (MQ=255) cAGATGCTTCAAGAATCGGTGGTAAGCAATATGTCTCTACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGt < 1:341205/250‑1 (MQ=255) aTGCTTCAAGAATCGGTGGTAAGCAATAAGTCTCGACAGGCAGCCCGACACACTGCATGCTGGATTTGATCAGTGAGACAAAAGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGGAGTTTTTTAGTCAGCGAAGCAGCGGTAGCCAGATCGCCTTCCCGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTAGCGCACCGTCGCCGC‑TCAG‑CAGCATCGGAtta < 2:118153/251‑2 (MQ=255) tGCTTCAAGAATCGGTGGTAAGCAATATGTCTCTACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCCC‑TCAA‑CAGCATCGTATTc > 1:209405/1‑250 (MQ=255) aaGAATCGGTGGTAAGCAATATGTCTCTACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCCTCGCCGC‑TCAG‑ACGCATCGTATTccgccaat > 1:205381/1‑244 (MQ=255) aaTCTGTGGTAAGCAATACGTCTCTCCAGGCAGCCCGACACACTGCATGTTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGat < 2:129373/251‑1 (MQ=255) aaTCGGTGGTAAGCAATATGTCTCTACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGat < 1:134682/251‑1 (MQ=255) gtggtAAGCAATATGTCTCTACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCCTCGTATTCAGCAAAAGATCATCg > 1:55543/1‑251 (MQ=255) gtggtAAGCAATATGTCTCTACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAACCAAAGATCATCg > 1:506716/1‑251 (MQ=255) gtAAGCAATATGTCTCTACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGGCGCCGC‑TCAG‑CCGCCTCGTATTCAGCCAATGATCATCGTa > 1:82352/1‑250 (MQ=255) atatGTCTCTACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTCAGCGCTGGCGGTTATCGCCCCGTCGCCGC‑TCAG‑CAGCATCGTATTCAACAAATTATCATCGTAACCGccg > 1:172984/1‑248 (MQ=255) ctACAGGCTGCACGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTGTCGAGGGCGGAAATAGCGGGCAGGTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGAGCGTCTTCACGCCAGGCGCGGTATATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCTTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATAcc < 2:154238/248‑1 (MQ=255) ctACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATAcc < 1:45377/248‑1 (MQ=255) aCAGGCTGCCCGACACACGGCAGGCTGTATTAGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTAGACAGCAAATGATCATCGTAACCGCAGAATTCCGaaa < 2:157753/250‑1 (MQ=255) aCAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGAAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGttaacgacgaataccgcaa > 1:361970/1‑232 (MQ=255) tacaacctttATTTGAGCAGTCCGACAAGCGGTGGTTTGAGTGCGCAAATAGCGGGCGGTTGTAGTATATTGTTAGTCAGCGGCGCAGCGGTATACAGATCGCCTTCGCTCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAGGTTAGCGCTGGCGGTTACCGCATCGTCGCCGC‑TCAG‑CAGCATCGTATGCAGCAAATGATCATCGTAACCGCAGAATATCGAAAACGACGGGCGTACCgta < 2:311144/240‑3 (MQ=255) cATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACTACGGGCGTACCGACTTaa < 1:169843/251‑1 (MQ=255) tATTTGATCAGTGAGCCAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGCCGCCGC‑TCCG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAA‑TGTGtt > 1:443515/1‑251 (MQ=255) aTTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGtt < 1:197239/250‑1 (MQ=255) gagaCAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATAGCACCCTCGCCGC‑CCTG‑CCGCATCCTATTCCGCAAATAATCATCATAACCCCAGAATACCGAAAACGACGGGCGGAACGACTTTAC‑TGTGTTGGTCATCgaacc > 1:193595/1‑247 (MQ=255) aaaCGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTGATAGCACCCACGCCGC‑ACAG‑CCACATCCTATTATGCAAAAGATCCTCGGAACCCCACAAGACCGAAAAAGAAGGGGGTACAGACTTAAcatagttgatactcggcaccaagg > 2:299846/1‑228 (MQ=255) gtTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAAc < 1:236098/251‑1 (MQ=255) gtTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTGAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTATGCAAG‑TGACCAAc < 1:35092/251‑1 (MQ=255) gAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTTTCGCACCGGCCCCCC‑CCCG‑CCGCATCCCATTCAGCAAATGCTCCTCGTCACCGCAGAATACCGCAAACGACGGGCGGCCCCACTTAAC‑TGTGTTGatcatccttcccacgtggccaacgcctc > 2:52938/1‑229 (MQ=255) gCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGAt < 1:384153/251‑1 (MQ=255) cGTAAATAGCGGGCAGTTGTAGTAGGTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATg < 2:567663/251‑1 (MQ=255) aaTAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGgtgt < 1:460280/251‑1 (MQ=255) aTAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGatc < 1:352751/216‑1 (MQ=255) aGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCtt < 1:72700/251‑1 (MQ=255) gggCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCCCTCCA‑‑CAGCATCGTATTCCGCAAATTATCATCCTAACCGCCGAAAACCGGAAACGACCGGCGTACCGACTTAAC‑TGTTTTGGTCCTCGTACGCAAG‑TTACCACCGCTGTCTATGTTGTCTTTgt > 1:302128/1‑250 (MQ=255) ttGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGGAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGGTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGGTCATCGTAACCGCAGAATACCGAAAACGACGGGCGGACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCggaggggtattttgtgcca > 1:275736/1‑232 (MQ=255) gtagtaGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTGCGCGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAAc < 2:412874/250‑1 (MQ=255) agtagtTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCCGAATACCGAAAACGACGGGCGGACCGACTTAAC‑TGTGTTGATCATCGTAAGCAAG‑TGACCAACGCTGTCGATGGGGTCTTTGATACCAACGat > 1:248518/1‑251 (MQ=255) gtagtTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑CCAG‑CAGCATCGTATTCAGCAAATGGTAATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGGCTTAAC‑TTAGGTGATTATTGTACGCAAG‑TGCACAACGCCGTCGTTGGTGTTTTTTATGCCAACGaa > 1:445909/1‑249 (MQ=255) agtTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATAtt < 1:11211/251‑1 (MQ=255) ttttATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTACGGAGCAGAGTTAGCGCAGGCGGTTATCGGACCGTCGCCGC‑GCAG‑CAGCCTCGTATTCAGCAAAAGATCATCGTAACCGCAGAAAACCGGAAACAGCGGGGGTAACGTATTAACATG‑GGGGATCATCGGACGAACG‑CTACCAACGCTGTCGGTGGGGTCTTTGAAGCCAAcaagaatctcg > 1:517076/1‑241 (MQ=255) tgttATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATtctc < 2:504626/248‑1 (MQ=255) tATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAGGCA‑CCTCGTATTTAGCAAATGATCATCGTAACCGCCGAATACCGAAAACGACGGGCGGACCGACTTAAA‑TGGTTTGATCATCGTACGCAAG‑TGACCAAAGCTGTCGCTGGGTTCTTTGTTGTCAACGGTATTCTCGttt > 1:380416/1‑251 (MQ=255) aTTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTCTCGCCCCGTCGCCGC‑CCAG‑CAGCATCGTATTCCGCCAATGATCATCGAAACCCCCGAATACCGGAAAAGACGGGCGTACCCACTTAAA‑TGTGTTGATCATCGTACGCAAG‑TGGCCAACGCTGGCGGTGGGGGCTTTTATGCCAACGATATTCTCGtttt > 1:477648/1‑251 (MQ=255) aTTCAGCCGCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATAGTCTCGttt < 2:254307/250‑1 (MQ=255) cAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCCCCGTCGCCGC‑TCAG‑CACCATCGTATTCCGCAAATGATCATCGGAACCGCAGAATACCGAAAACGACGGGCGTAACGACTTAAC‑TGTGTTGATCATCGTACGCCAG‑TGACCACCGCTGTCGCTGGGGGTTTTTTTGCCCACGGTATTCTCATTTTGcc > 2:155726/1‑250 (MQ=255) cGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCTCCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCTCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGTCCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCagag < 1:469691/251‑1 (MQ=255) gcgcctcgggcGCCAGATCGCCTTCACGACAGGCGCGGTAGATTCCGACGGAAAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCAACGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGcc < 1:380301/241‑1 (MQ=255) ggaGCGGGCGCCAGAGCGCCGTCACGCCAGGCGCGGTAGAGGCCGACGGAGAGTTCCGGAGCAAAGGTAGCGCGGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAg < 2:302128/249‑1 (MQ=255) ggTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGAcgcg < 2:506716/251‑1 (MQ=255) ggTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGAcgcg < 1:155726/251‑1 (MQ=255) gTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCCCCGGCGCCGC‑TCAA‑CAGCATCGTATTCCGCAAATGATCATCGTCAACGCAGAATACCGAAAACGACGGGCGGCCCGACTTAAC‑TGTGTTGATCATCGTACGACAG‑TGACCAACGCTGTAGATGGGTTCTTTGATTACAACGCTATTTTCGTTTTGCCGAGACCGAcgcgg > 2:508455/1‑250 (MQ=255) cGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCTC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCa < 2:522392/251‑1 (MQ=255) gCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCCG‑CAGCATCGGATTTAGCAAATAATCATCGTAACCGCAGAATACCGAAAACGACCGGCGTACCGACTTTAC‑TGTGTTGATCATCGGAACCAAGATGAC‑AACGCTGTCGATGGTGGTTTTGATACCCACGATATTTTCGATTTTCAGAGCCAGAAGCGTCa > 2:322705/1‑250 (MQ=255) aGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGt < 1:52938/251‑1 (MQ=255) aGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGt < 1:370406/251‑1 (MQ=255) aTCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGGCGCCGC‑TCAG‑CAGCCTCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACAGGCGTACCGAATTAAC‑TGTGTTGATCAACGTAAGCAAG‑TGAACAACGCTGTCGATGGGGTCTTTGATGCCAACGATATTCTCGGTTTGCAGAACCAGACGCGTCACgggtt > 1:314960/1‑248 (MQ=255) gcgGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGGCGCCGC‑TCAG‑GAGCATCGTATTCAGCAAATGATAATCGGAAACGCAGAATAACGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGGTGGTGGCTTTGATTCCAACGATATTATCGTTTTGCAGAGCCAGACGCGGCACGGGTTCCGGGGTTAAGTCCTGAc > 1:165875/1‑251 (MQ=255) ccGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAATTCCTGACCCGTCAGAtt < 2:321783/251‑2 (MQ=255) gACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCCG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTAAGCCAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGAttcg > 1:513785/1‑248 (MQ=255) gACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGAttcg < 1:299846/251‑4 (MQ=255) agTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATAGTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATTCGGAAAGtt < 1:254907/251‑1 (MQ=255) ccGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCATCGCTGTCGATGGTGTCTTTGATGCCAACg < 1:388008/173‑1 (MQ=255) cGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATTCGGAAAGTTGTACa < 2:209405/251‑1 (MQ=255) cGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑CCAG‑CAGCATCGTATTTCGCAAATGATCATCGGAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGGCCAACGCTGTCGGTGGGGTCTTTGATGCCAACGAAATTCTCGTTTTGCAGAGCCCGACGCCTCCCGGTTTTCGGGGTTAAGTCCTGGCCCGGCAGaattggaaaggtgtta > 1:309323/1‑235 (MQ=255) gAGCAAAGTTAGCGCTGGCGGTTATCGCAACGGCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCCTCCTAACCGCAGAATACCCAAAACGACCGGCGTACCGCCTTAAC‑TGTGTTTATCATCGTACGCAAA‑TTACCACCGCTGTCGATGGTGTCTTTGATTCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCCCGGTTTCCGGGGTTTAGTCCTGAcccctcctattctgcaagttttcccgg > 1:124213/1‑227 (MQ=255) aaggtAGCGCTGGCGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATAATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATTCGGAAAGTTGTTCAGGATCAc < 2:127818/247‑1 (MQ=255) cGGTTATCGCACCGTCGCCGC‑TCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACg < 1:508455/251‑1 (MQ=255) cACCGTCTCCGC‑TCAG‑CAGCATCGTATTCATCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTTATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGGTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGGCCTGTCCCGGCAGATTCGGAAAGTTGTACAGGATCACCGGTGGGGTGACGCTACGGGCg < 2:368330/251‑1 (MQ=255) cccctCGCCGC‑TCAG‑CAGCATCGTATTCAGAAAATGATCATCGTAACCGCAGAATACCTAAAACGTCGGTCGTACCTACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGGCGATGGTGTCTTTGATGCCAACGTTATTCTCGTGTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCGTACCCGTCAGATTCGGAAAGGTGTACAGGAACACCGGTAGGGTGACTCTACGGGCGa < 2:443515/247‑1 (MQ=255) cgccgc‑TCAG‑CAGCATTGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCCGACCCGTCAGATTCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATctg < 1:532767/250‑1 (MQ=255) | TCTTCAGATGCTTCAAGAATCGGTGGTAAGCAATATGTCTCTACAGGCAGCCCGACACACTGCATGCTGTATTTGATCAGTGAGACAAACGGTGTTTCGAGGGCGTAAATAGCGGGCAGTTGTAGTAGTTTTTTATTCAGCGTCGCAGCGGTCGCCAGATCGCCTTCACGCCAGGCGCGGTAGATGCCGACGGAGAGTTCCGGAGCAAAGTTAGCGCTGGCGGTTATCGCACCGTCGCCGC‑CCAG‑CAGCATCGTATTCAGCAAATGATCATCGTAACCGCAGAATACCGAAAACGACGGGCGTACCGACTTAAC‑TGTGTTGATCATCGTACGCAAG‑TGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTG > NC_000913/4524160‑4524644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |