| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,489,775 | C→T | V97M (GTG→ATG) | yjgR ← | DUF853 domain‑containing protein YjgR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,489,775 | 0 | C | T | 96.0% | 210.6 / ‑4.6 | 76 | V97M (GTG→ATG) | yjgR | DUF853 domain‑containing protein YjgR |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base T (38/34); total (39/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GATGCGCTACTGATATTACCGTACTGATTCTGGAAGGATTTGGCGTTATCGCCGATGTACTGGGTAATTGCCCGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑CCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAAC > NC_000913/4489528‑4490019 | gATGCGCTACTGATATTACCGTACTGATTCTGGAAGGATTTGGCGTTATCGCCGATGTACTGGGTAATTGCCCGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCAca‑tcac > 1:553583/1‑251 (MQ=255) gATATTACCGTACTGATTCTGGAAGGATTTGGCGTTATCGCCGATGTACTGGGTAATTGCCCGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTgg > 1:422138/1‑251 (MQ=255) agtccaggaCTGATTCTGGAAGGAGTTCGCGTTATCGCCGATCTACTGGGTAATTGCCCGTAGATCTTTAAAGTCGATAAGTAACCTCCCCTGATCGGCATCAATGCTGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGAGTCAACCGTCGTGCCAGCAACAGCGGCCACAGAACCTAAACCGTCGCCCGCCCCGGATGCCCTTTCTCCCCAAAGATATCCCACA‑TCTCCACC‑GGATTGGCAt < 2:73203/243‑1 (MQ=255) tACCGTACTGATTCTGGAAGGATTTGGCGTTATCGCCGATGTACTGGGTAATTGCCCGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGc > 1:6990/1‑251 (MQ=255) gTACTGATTCTGGAAGGATTTGGCGTTATCGCCGATGTACTGGGTAATTGCACGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCCCCGGATGGCCTTTCTCGCCAAAGATATCCCCCA‑TCACCACC‑GGATTGGCGTGCGGtt > 2:239445/1‑251 (MQ=255) tGATTCTGGAAGGATTTGGCGTTATCGCCGATGTACTGGGTAATTGCCCGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCACTGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAGCAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCAACA‑TCCCCACC‑GGATTGGCATGCGGTTG‑ccc > 2:174758/1‑250 (MQ=255) cTGGAAGGATTTGGCGTTATCGCCGATGTACTGGGTAATTGCCCGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCCCCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGCTTGGCAAGCGGTTG‑CCAGTCAt > 2:292835/1‑251 (MQ=255) aaGGATTTGGCGTCATCGCCGATGTACTGGGTAATTGCCCGCAGATCTTTAAAGGCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGAc < 1:414188/251‑1 (MQ=255) gATTTGGCGTTATCGACGATGTACTGGGTAATTGCCCGAAGATCTTTAAAGTCGAGCAGTAAAAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGAACGCCAGATTGCACATCGTTGAGATTCAACACTCGGGCCAGCAACAGCGGCCCCAGATCCGAAACCGACGCCCGCACCGGCTGGCCTTTCTCGCCAAAGATATCCCACAACCAC‑ACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGTCGcc > 2:72110/1‑251 (MQ=255) cGATGTACTGGGTAATTGCCCGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCtt < 1:432192/251‑1 (MQ=255) gTACTGGGTAATTGCCCGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCg < 1:526376/250‑1 (MQ=255) gTAATTGCCCGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGCTGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGTTTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGttt > 2:291911/1‑251 (MQ=255) gTAATTGCCCGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGttt < 1:387755/251‑1 (MQ=255) gCCCGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTGTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTCGCGAGCAGTTTTTCCg < 2:27935/250‑1 (MQ=255) cccGCAGGTCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAACAACAGCGGCCCCAGAGCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGTTATCCAACA‑TCCCCACA‑GGATTGGCCAGCGGTTT‑CCAGCCATTACCGTCGCATATTTT‑ACGCCTTGCGCGCTGTTTTTCCGac > 2:118144/1‑251 (MQ=255) cAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑Cg > 1:44396/1‑251 (MQ=255) aGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGt < 1:234253/251‑1 (MQ=255) ttAAAGTCGAGCAGTAACAGCCCCTGATCGGCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTcctg < 2:128641/250‑1 (MQ=255) tAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTcctgc < 1:498446/250‑1 (MQ=255) aaattCGAGCAGTAACAGCCCCTGAGCGTCAGCAATGCGGAAGATGATAGTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCATCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCAGTGACGCCG‑ATATTGTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGCTcctgcc < 1:535609/246‑1 (MQ=255) gAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACAGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GAATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CATTCCTGCCTGagcg > 2:9514/1‑250 (MQ=255) ggCAGTAACAGCCCCGGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACCGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAGCCGCCGCCCGCACCGGATGTCCTTTCTCGCCAAAGATATCCCACA‑TCACCAAC‑GGATTGGCATGCGGTTG‑CCAGTCATTGGCGCCG‑ATATTTTGAAGCCTTGCGAGCGGGTGTTCCGACAC‑CGGTCCTGCCTGCGCGAc < 2:80937/250‑1 (MQ=255) aGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCCAAGATATCCCACA‑TCCCCACC‑GGCTTGGCATGCGGTTT‑CCAGACATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCCGTTTTTCC‑CCACACGTTCCTGCCTGcgcgccacc > 2:174961/1‑246 (MQ=255) ccTGATCGTCAGCAATGCGGAAGATGCTATTCAGCACGACAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGCTTGGCATGCGGTTG‑CCAGTCAtt > 2:78331/1‑178 (MQ=255) ccTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTGTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCAtt < 1:78331/178‑1 (MQ=255) gATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACAGCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGc < 1:37058/249‑1 (MQ=255) agcgtcagcaagatgaacaatgatCTTCAGTACGTCCGATGGCACATCGTTGTGAGTCAACAGGCGGGCTATCACCAGCGTCCCCAAATGCGAACCCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCACCCA‑TCACCACC‑GTATTGGCATGCGCTTG‑CCAGTTCTTGGCGTCG‑TTATTGTTAAGCTGTCCGAGCTGTTTATCCGTCAC‑CGTTCCTGCCTGCGAGACGCCGGTCAGATCGCCtt < 2:487834/232‑1 (MQ=255) aaTGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAg < 1:293076/251‑1 (MQ=255) aTGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGc > 1:416258/1‑251 (MQ=255) aTGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGc < 1:500039/251‑1 (MQ=255) aGATGATATTCAGCACGCCAGATTGCACATCGCTGAGATTCCACAGTCATGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCATTTCACATCAGCCATAAac > 1:482767/1‑251 (MQ=255) aactCAGCCCGCCAGATTGCAAAACGTTGAGATTAAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCACCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGc < 2:456739/248‑1 (MQ=255) atgcagcaagcaagaattcacaACGTTGAGCTTCAACTGTCGGGCCAGCAACACAGTACCCAGATCCGAAACCTTCGCCCGCACCGGATGGCCGTTTTAGCAAAAGATATCCCACA‑ACACCACC‑GGGTTGGCATGCGGTTG‑CCAGCCATTGACGCCG‑ATAGTTGTAAGCCTGGCGAGCAGTTTTTCCGACAC‑CGTACCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCTCATCAGACATAAACACCGGc < 2:129062/232‑1 (MQ=255) ttCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCa > 2:5073/1‑147 (MQ=255) ttCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCa < 1:5073/147‑1 (MQ=255) ttCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTACTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCAc > 1:507200/1‑251 (MQ=255) cAGCACGCCAGCTTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGCTTGGCATGCGGTTG‑CCAGTCATTGCCGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGc > 1:332951/1‑251 (MQ=255) aGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGcc < 1:239054/251‑1 (MQ=255) cACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCgc > 2:539131/1‑250 (MQ=255) cGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCAGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCCTAAACACCGGCACGCCgctt > 1:546870/1‑248 (MQ=255) agaTTCAACAGTCGTTCCAGAAACAGCGGCCCCAAATCTGAAACCTGCGCCCCCACCGTTTGGCCTTTCTCGCCAAAGATATCCCTCA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACTCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CTTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAg < 2:243845/251‑1 (MQ=255) ttCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCCCCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGCCGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGCCAC‑CGTTCCTGCCTGCGCGACCCCGGTCAGATCGCCTTTCAAAACAACCATAAACACCGGCCAGCCGGTTTCCGACA‑ATGACTCCGCCAGttt > 2:448914/1‑251 (MQ=255) cAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGttttt > 1:27798/1‑251 (MQ=255) aaCAGGCGGGCCAGCACCAGCGGCCCCACACCCGAAACCGCCGCCCGCTCCGGATGGCTGTTCTCGCCAAAGATATCCCCCA‑TCACCTCC‑GGATTGGCATGCGGTTG‑CCAGTCATTGCCGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCATGCGCGACGCCGGTCATATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTg < 1:397591/251‑1 (MQ=255) aGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGc > 2:130198/1‑249 (MQ=255) ccAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCCGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACg > 1:435831/1‑251 (MQ=255) aaCAGCGGTCCAAGATCCGAAACCGTCTCCCGCACCGGATGGCCTTTCTCGCCAAAGATTTCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAA‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACTCCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGtttt < 1:514271/251‑1 (MQ=255) ccacaggCCCCATACCCTAAACCGTCGCCCGCACAGGATGGCCTTACTCCCCAATGATATCCCCCA‑TCACCACC‑GGATTTGCATGCGGTTG‑CCAGGCATGGCCGCCG‑ATGTTTTTAAGCCTTGCGAGCAGTTTTTCCGCCAC‑CGTTCCTGCCCGCGCGCCGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCTGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTa < 2:435831/246‑1 (MQ=255) aCAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGCCA‑ATGACCCCGCCAGTTTTTGCAGCGTAACGGtttt > 1:301801/1‑250 (MQ=255) aCAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTa < 1:278854/251‑1 (MQ=255) cagagatcccAGATCCGAAAACGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTACTTGACGCAG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGACTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTAc > 2:544520/8‑251 (MQ=255) gCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTAccc > 1:49187/1‑251 (MQ=255) ggCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCCCGCCGCTTTCCGACA‑TTGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGt > 2:420359/1‑251 (MQ=255) cccAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGCTTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGCCGCCGGTCAGCTCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTCTTGCAGCGTAACGGTTTTACCCGTccc > 2:395554/1‑251 (MQ=255) cAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTccc > 2:294838/1‑249 (MQ=255) aTCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGACG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATACACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTg > 1:527760/1‑251 (MQ=255) gAAACCGTCGCCCGCACCGGCTGGCCTTTATCGCCCAAGCTATCCCACC‑TCACCACC‑GGCTTGGCCTGCGGGTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCCGTTTTTCCGACCC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATACGCCCTAACCACCGACACGCCGATTTCCGCCA‑CTGACTCCGCCCGTTTATGCAGCGTAACGGTTTTACCCGTCCCCTTTGCGcc > 2:286671/1‑251 (MQ=255) acccGTCTCCCGCACCGGAGTGCCTTTCCCGCCAAAGATTCCCCCCT‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCTTTGACGCCG‑ATATTTTTAAGCCTGTCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGGTGCGCCgg < 2:499558/249‑1 (MQ=255) ccGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGcc > 2:119101/1‑184 (MQ=255) ccGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGcc < 1:119101/184‑1 (MQ=255) cGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCggga > 2:332485/1‑248 (MQ=255) gTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGATTTACCCGTCCCCGTTGCACCGGTAAt > 2:382218/1‑251 (MQ=255) gCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGccc > 1:467401/1‑250 (MQ=255) ccccGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTa < 1:293418/209‑1 (MQ=255) cACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCAt < 1:539131/251‑1 (MQ=255) cACCGGAGGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCAGCCAGTTTTTGCAGCGTa > 2:293418/1‑211 (MQ=255) cACCGAATGGCCTTTCTCGCCTAAGATACCCCACA‑C‑ACCACCCGGATTGGCATGATGTTG‑TCAGTCATTGACGCTG‑ATATTTTTAAGCCTTGCCAGAAGTTTTTCCGACAC‑CGTTCCTCCCTGCGCGACGCCGGGCAGATCGCCCTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTCCCCGGCCCCGTTGCGCCGGTAATCAGCCCAt < 2:416258/251‑1 (MQ=255) ccGGATGGCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGa < 1:294838/251‑1 (MQ=255) ggCCTTTCTCGCCAAAGATATCCCACA‑TCCCCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGCTTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTAGCGCCGGTAATCAGCCCATGACGGtt > 2:82725/1‑250 (MQ=255) ggCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTa < 1:395554/251‑1 (MQ=255) gcatttCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATTCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTGGCGAGCAGGTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAg < 1:286671/248‑1 (MQ=255) gCCTTTCTCGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAg < 1:239445/251‑1 (MQ=255) tccccccAAAGATACCCCACA‑CCACCACC‑GGATTGTCATGCG‑TTGTCCAGTCATGGACGCCG‑ATATTTTTAAGCCTTGCGATCAGTTTTTCCGACAC‑CGTTCCTGCCGGCGCGACGCCGTTCAGATCGCCTTTCCCATCAGCCATAAACCCCGGCCCGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCAt < 2:422138/245‑1 (MQ=255) cGCCAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTccc < 1:9514/251‑1 (MQ=255) cAAAGATATCCCACA‑TCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGCGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAACCACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTACCGGTTTTACCCGTCCCCGTTACGCCAGTAATCAGCCCATGACGGTTAGCCATTCCCGGc > 2:531588/1‑251 (MQ=255) aaaGATATCCAACA‑TCACCAAC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTACCTGCGCGACGCCGATCAGATCGCCTTTCACATCAGCCATCAACACCGGCACGCCGTTTTCCGACACAT‑ACTCCGCCAGTTTTTGCAGCGAAACGGCTTTACCCGTCCCCGTTGCGCCGGTAATCAACCCATGACGGTTAGCCATTcccagc > 2:434613/1‑247 (MQ=255) cccACA‑TCCCCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAAc < 1:88581/251‑1 (MQ=255) | GATGCGCTACTGATATTACCGTACTGATTCTGGAAGGATTTGGCGTTATCGCCGATGTACTGGGTAATTGCCCGCAGATCTTTAAAGTCGAGCAGTAACAGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACA‑CCACCACC‑GGATTGGCATGCGGTTG‑CCAGTCATTGACGCCG‑ATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACAC‑CGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACA‑ATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAAC > NC_000913/4489528‑4490019 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |