| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,435,124 | C→T | W481* (TGG→TAG) | cpdB ← | 2',3'‑cyclic‑nucleotide 2'‑phosphodiesterase/3'‑nucleotidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,435,124 | 0 | C | T | 97.4% | 106.0 / NA | 38 | W481* (TGG→TAG) | cpdB | 2',3'‑cyclic‑nucleotide 2'‑phosphodiesterase/3'‑nucleotidase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (19/18); minor base G (0/1); total (19/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAGCAAAAGCGATATGGCTGTCGCCCGTACCGGCAAATTTGCCGCCGTAAGCGCGATAGTTATTGGTGGCAACCAGGAACATGGCGTTCGGATCAATCGGCTTGCCATTAAAGGTCAGGTTCTTAATCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCCAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACCTCCACATAGCTTGCCGGGTCATTTTTGCGACCACCGACTTTAAACGGTGCGGCAGCTGAAAGCACCGGC > NC_000913/4434879‑4435366 | aaGCAAAAGCGATAGGGCTGGCGCCCGTACCGGCAAATTTGCCGCCGTTAGCGCTATAGTTATTGGTGGCAACCAGGAACATGGCGTGCGGATCAATCGGCTTGCCATTAAAGGTCAGGTTCTTAATCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTtg < 1:317199/251‑1 (MQ=255) agagATATGGCTGTCGCCCGTACCGTCAAATTCGCCTCCGTAAGCGCTATAGTTATTGGTGGCAACCAGGAACATGGCGTTCGGAGCAATCGGCTTGCCATTAAAGGTCAGGTTCTTAATCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAAGCATACTAGTTGATGAGTg < 1:164395/248‑1 (MQ=255) aaaaTTTGCCGCCGTAAGCGCGATAGTTATTGGTGGCAACCAGGAACATGGCGTTCGGATCAATCGGCTTGCCATTAAAGGTCAGGTTCTTAATCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCa < 1:558707/250‑1 (MQ=255) cgcgATAGTTATTGGTGGCAACCAGGAACATGGCGTTCGGATCAATCGGCTTGCCATTAAAGGTCAGGTTCTTAATCCTTGCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑ccc < 1:506258/251‑1 (MQ=255) gcgATAGTTATTGGTGGCAACCAGGAACATGGCGTTCGGATCAATCGGCTTGCCATTAAAGGTCAGGTTCTTAATCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCcg > 1:521715/1‑251 (MQ=255) cAGGAACATGGCGTTCGGATCAATCGGCTTGCCATTAAAGGTCAGGTTCTTAATCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCtt > 1:455851/1‑251 (MQ=255) tggAACAAGGTGTTCGGATCACTAGGCTTGACATTAAAGGTCAGGCTCTTAATCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACCTCAATCTGATAATTCACACCATCAATATAATCCAAGTTATAAGTGCGGAAACCATACTAGTTGATGAGTGTCTGTGGTTTAGTGCGGTTAGGATCCATCTGGTTAAACTGT‑ACCGGCGAG‑ACGTCCAGCCACTCttt > 2:79829/2‑251 (MQ=255) aaCATGACGTTCGGGTCAATCGGCTTGCCATTAAAGGTCAGGATCTTAATCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATCACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACACTCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGATTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCAAGCCAATCTTTCAc > 2:268040/1‑251 (MQ=255) ttgggATCAATCGCCTTGCCATTAAAGGTCAGGTTTTTACTCCTTCCCTCATTGGCTTTAATCATCTGGCACTCGCCGTTATAACGGGCGGTTTGGGTACCATCAAGCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCTTGCTGTTGGGATCAATCTGGTTAAACTTC‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTAc < 2:449049/247‑1 (MQ=255) cATTAAAGGTCAGGTTCTTAATCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACAATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATc > 1:533279/1‑251 (MQ=255) aaGGTCAGGTTCTTAATCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGt > 1:189242/1‑251 (MQ=255) tAATCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATag < 1:495740/248‑1 (MQ=255) attCCTTCCCGCATGGGCATTAATCATCGGGCACTCGCCGTCATACCGGTCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAATTTATAAGTGCGGAAACTAGTCTAGTGGATGATTGCCGTTGGTTTCGTGCGGTTGGTATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCGTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAgaga < 2:310855/248‑1 (MQ=255) aTCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGAt > 1:193933/1‑250 (MQ=255) ccTTACCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGACTGGGTAACATCAATCTTATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGATTGACTGTGTTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCTC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATaaa < 1:7257/251‑1 (MQ=255) cGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATaa > 1:350356/1‑244 (MQ=255) ggCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCa < 1:76926/249‑1 (MQ=255) gCCGTCAAAACGGGTGGGCTGGGTAACATCAACCTGATAATTCACCCCATCAATAGCATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGATTGACGGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTTGCCtt < 2:567013/251‑1 (MQ=255) aaCGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCAcc < 1:383159/251‑1 (MQ=255) cgggcgggCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGACGGACAACAGGCCTTTTTCCACCTc > 2:140015/1‑251 (MQ=255) gcgggcTGGGTAACATCAATCTGATAATTCACACCATCAAAAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACCTCcac < 1:99671/251‑1 (MQ=255) ggTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACCTCCACATAGCTTg > 1:176888/1‑251 (MQ=255) gTAAAATCAATTTGATAAGTCACACCATCAATAAAATCAAAGTTATAAGTGCGGAAACCATCCTATTTGATGAGTGACTGTGGTTTCGTGCTGTTGGTATTAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACCTCCACATAGCTTGc < 2:350356/251‑1 (MQ=255) cAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGTATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGcc < 2:261198/129‑1 (MQ=255) cAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGcc > 1:261198/1‑129 (MQ=255) ttCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCa > 1:336098/1‑115 (MQ=255) ttCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACGGTGGTTTCTTGCTGTTGGGATCAATCTGGTTAAACGGT‑CCCGCGGAGCAC‑TCCa < 2:336098/115‑1 (MQ=255) cacaCCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCCCCTCCACCTAGATTGCCGGGTCATTTTTGCcaccac > 2:211184/1‑251 (MQ=255) cacaCCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACCTCCACATAGCTTGCCGGGTCATTTTTGCGaccac > 1:381239/1‑251 (MQ=255) acccATCAAAAACTTAAAAGTTATAATGGCGGAAACCATCCGAGTTGATGGTTGACTGTGGTTTTGTGCTGTTGGGATCATTCTGTTTAAACTGT‑CCCGCGGACCAC‑TCCAGCCTCTCTTTCACCTCTTTACCGCTGGCTTTCACCGCAATCAGCGTATTGGGATAGATATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACCTCCCCATAGCTTGCCGGGTCATTTTTGCGacca < 2:479293/246‑1 (MQ=255) acCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACCTCCACATAGCTTGCCGGGTCATTTTTGCGACCACCgc > 1:298436/1‑250 (MQ=255) aTCAATAACATCAAAGTTATAAGAGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCCCCTCCACATAGCTTGCCGGGTCATTTTTGCGACCACCGACtt > 1:375065/1‑251 (MQ=255) aTCAATAACATCAAAGATATAAGTGCGGGAACCATCCTAGTTGATGAGAGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACATCCACATCGCTTGACGGGTCATTTTTGCGACCACCGTCtt > 2:426994/1‑251 (MQ=255) aaCATCAAAGTTATAAGTGCGGAAACCATCCTAGTTGATGGGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACCTCCACATAGCTTGCCGGGTCATTTTTTCGACCACCGACTTTAAACg > 1:202380/1‑251 (MQ=255) aaaGTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGcc < 1:546805/189‑1 (MQ=255) gTTATAAGTGCGGAAACCATCCTAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACCTCCACATAGCTTGCCGGGTCATTTTTGCGACCCCCGACTTTACACGGTGCGGCac > 2:242440/1‑250 (MQ=255) ggAAACCATCCTGGTTGAGGAGTGCTTGTGGTTTCGTGTGGTTTGGATCAATCTGGTTAAAC‑GTGCCCGAGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACCACCACATAGCTTGCCGGGTCATTTTTGCGACCACCGACTTTAAACGGTGCGGCAGCTGAAAGCAcc < 2:521715/251‑1 (MQ=255) aaCCATCCTAGTTGATGAGTGACTGTGGTTTCGGGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACCTCCACATAGCTTGCCGGGTCATTTTTGCGACCACCGACTTTAAACGGTGCGGCAGCTGAAAGCACCGGc < 1:417330/251‑1 (MQ=255) | AAGCAAAAGCGATATGGCTGTCGCCCGTACCGGCAAATTTGCCGCCGTAAGCGCGATAGTTATTGGTGGCAACCAGGAACATGGCGTTCGGATCAATCGGCTTGCCATTAAAGGTCAGGTTCTTAATCCTTTCCGCATTGGCATTAATCATCTGGCACTCGCCGTCATAACGGGCGGGCTGGGTAACATCAATCTGATAATTCACACCATCAATAACATCAAAGTTATAAGTGCGGAAACCATCCCAGTTGATGAGTGACTGTGGTTTCGTGCTGTTGGGATCAATCTGGTTAAACTGT‑CCCGCGGAGCAC‑TCCAGCCACTCTTTCACCTCTTTACCGCTGGCTTTCACCACAATCAGCGTATTGGGATAGAGATAAAGATCGGCGGCATTACGGAAGGTCAACTGGCCTTTTTCCACCTCCACATAGCTTGCCGGGTCATTTTTGCGACCACCGACTTTAAACGGTGCGGCAGCTGAAAGCACCGGC > NC_000913/4434879‑4435366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |