| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,303,755 | C→T | V119I (GTT→ATT) | mdtN ← | putative multidrug efflux pump membrane fusion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,303,755 | 0 | C | T | 98.6% | 213.1 / NA | 74 | V119I (GTT→ATT) | mdtN | putative multidrug efflux pump membrane fusion protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (35/37); minor base G (0/1); total (36/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCAATATCCGCTTCGACCGCCGCACGCTGGGCAACTAATGCATCCACGCCGCTGACGGCGCTGGCGGCTGACTGCGCCTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAACCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACATCAATGGTATCTGCTGACGCGTAAGCGTCATTAGTTGATGGCGCA > NC_000913/4303511‑4304005 | gcacatctctctccGACCGCCGCACGCTGGGCAACCAATGAATCCCCGCCGCTGACGGCGCTGTCGGCTGACTGCGCCTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCCCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCTCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTc < 2:448897/238‑1 (MQ=255)caactatCCTCTTCTACCGCCGCCCGCGGGGCATCTAATGCATCCACGCCGCTTACGGCGCTGGCGGCTGACGTCTGCTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGTCTTTCTTGCACGGTCAACATCTTCCGCTGAGACAAATCCTTCGTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGTTTTTTCTCCCGTGGCCTTATTCGAGTc < 2:491489/247‑1 (MQ=255) gCTTCGACCGCCGCACGCTGGGCAACTAATGCATCCACGCCGCTGACGGCGCTGGCGGCTGACTGCGCCTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCaa > 1:234126/1‑250 (MQ=255) cGACCGCCGCACGCTGGGCCACTAATGCATCCACGCCGCTGACGGCGCTGGCGGCTGACTGCGCCTGTAACAGTACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCCACATCTTCCGCTGAGCCACAACCTTCTTTCAGTAATGGCTCGGGTCGGCGGAATGTATCTGTGGCCTGTTTCGCGGCAGCACGGGGTTCTTCTACCGTGGCATTAATCGAGTCGGcccacaacttt > 2:277192/1‑241 (MQ=255) gccgccCGCTGGGCAACTAATGCACCCACGCCGTTGACGGCGCTGGCGGCTGACTGCGCCTTTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTGCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTgcgc < 2:557261/251‑1 (MQ=255) ggCAACTAATGCATCCACGCCGCTGACGGCGCTGGCGGCTGACTGCGCCTGGAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCTCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAacgctac < 1:352487/251‑1 (MQ=255) aaTGCATCCACGCCGCTGACGGCGCTGGCGGCTGACTGCGCCTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTggg < 1:494615/250‑1 (MQ=255) aaTGCATCCACGCCGCTGACGGCGCTGGCGGCTGACTGCGCCTGTAACAAGACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTggg < 1:292615/250‑1 (MQ=255) cATCCACGCCGCTGACGGCGCTGGCGGCTGACTGAGCCTGTAACAATACGGCATTAAGATCCGCTTCTCCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGCGACAAAACCTTCTTTCAGTAATGGCTCGGGGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTCGCGTGGCATTAATCGGGTAGGCACCAAACTGTTGCGCGTCAACGCTACACCGGGTGAGc > 1:336199/1‑251 (MQ=255) ccgcTGACGGCGCTGGCGGCTGACTGCGCCTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTg < 1:234305/251‑1 (MQ=255) gACGGCGCTGGCGGCTGACTGCGCCTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTAt > 1:195217/1‑251 (MQ=255) ggCGCTGGCGGCTGACTGCGCCTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCa < 1:488143/251‑1 (MQ=255) ggCGCTGGCGGCTGACTGCGCCTGTAACAATACGGCATTAAGATCCGCTTCGGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGACCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTAGGCAACCAACTGATGCGCGTCAACGCTACGGTGGGTGTGAATAATTTGCTTAttcc > 2:522097/1‑248 (MQ=255) ggCGCTCGCGGCTGACTGCGCCTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCCAGGGCTTTTTGTACCGTGGCATTAAAAGAGACGGCACCCAACTGTTGCGCGTCAACGCTACGCAGGGGGAGCATAATTTTCTTATcac > 2:368414/1‑249 (MQ=255) cggcTGACTGCGCCTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCTCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCcgcg < 1:68092/251‑1 (MQ=255) cggcTGACTGCGCCTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCcgcg < 1:162897/251‑1 (MQ=255) gtacgtcgcctgtaaaattcctgtaTTATGATCCGCTTATGCGGCTCGCTTCGCCGTGCTTGCACGGTCTGCTTCTTCCGCTGTGACAATGTTTTCTTTCAGTTATGGCGCGGTGCGGCGTAAGGTATCTGTGGCTTGTGTCGCGTCGTCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACTCTACGCTGGGTGAGCATAAGTTGGTTAGCCAGCGCCGCgagg < 2:504172/226‑1 (MQ=255) ccTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGAGCGGCGTAATGTATCTGTGGCATGTTTCGCGGCGGCACGGGCTTTTTCTACTGTGGCCTTCATCGAGTAGGCACCAACCTGTTGCGCGTCAACACTACGCTGGGTGAGCATAATTTACCTATCCAGCGCCGCAGGGGAGGGTTcc > 2:322902/1‑250 (MQ=255) cAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCg < 1:242265/251‑1 (MQ=255) cAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCg > 1:93409/1‑251 (MQ=255) aaTACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCACACTGTTGCGCGTCAACGCTACGCTGGGTGCGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGc > 1:509732/1‑251 (MQ=255) cATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTg < 1:454519/251‑1 (MQ=255) tCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGt > 1:363024/1‑250 (MQ=255) gCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAg < 1:99311/236‑1 (MQ=255) gCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGGGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACCCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGGGGGAGGCTTCAGCTTTTGCCAgcagtcggaagggcgg > 2:99311/1‑236 (MQ=255) tGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAACGCCGCGAGGGTGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGcgcg > 1:307293/1‑251 (MQ=255) gcggcgCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTGCAGGTATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTGGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCgg < 2:205805/251‑1 (MQ=255) cgcgcTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCTAGTCGGCACCAAACTGTTGCGCGTCAATGCTACGGTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTGAGCTTTAGCCAGATTGGCTTCGGACGGGCGCGGGTCg > 1:408489/1‑251 (MQ=255) cgcTGCGCCGTTCTTGCACGGTCAACATCGTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGAt < 1:448785/251‑1 (MQ=255) gcgcCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGGAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTACGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCg < 2:569204/250‑1 (MQ=255) cgcCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACTTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGATGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGa < 1:411754/251‑1 (MQ=255) gcCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCTCGGGTCGATGCGGa > 1:499778/1‑250 (MQ=255) gcCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGa > 1:70197/1‑250 (MQ=255) gcCGGTCTTGCACGGTCAACATCTTCCGCTGAGACAAACCCTTCTTTCAGTAATGGCGCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTCCCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGTCGCGGGTCGATGCGGaa < 1:12805/251‑1 (MQ=255) catGCACGGTCAACATCATCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGGGCGTCGTAATGTATCTGTAGCCTGTTTCGCGGCGGCCCGGGCTTTTTCTACCGTGGCATTAATCGCGTCGGCACCCAAATGTTGCCCGTCAACCCAACGCGGGGTAGGCCTACTTTGCTTATCCAGCGCCGCGAGGGACGCTTCAGCTTTCACCAGCTTGGCTTCGTCCGGTCTCCGGTCGGTGAGGAACaaca > 2:106398/3‑247 (MQ=255) cAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGt > 1:49577/1‑251 (MQ=255) cAACATCTTCCGCGGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTg < 1:71143/250‑1 (MQ=255) aCATCGTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGttt < 1:106398/251‑1 (MQ=255) gaCAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTCCCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCCCCCTGTTTGACTGCCTGGTTGt > 1:365969/1‑251 (MQ=255) aaaCCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATTCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGt < 1:480799/251‑1 (MQ=255) aaaCCTTCTTTCAGTAATGGCCAGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGt < 1:277192/251‑1 (MQ=255) aaCCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTg > 1:32834/1‑251 (MQ=255) acttgtgtcacgaaTGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGGTCCGCAGCGGAACGGGCTGTTTCTACCGGTGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTTCGCTGGGTGAGCATAATTTGATTATCCAGAGTCGCGAGGGAGGCTTCAGCTTTCTCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGa < 2:208946/238‑1 (MQ=255) cttcttTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGAcc > 1:520028/1‑251 (MQ=255) cttatttCAGTAATGGCTCGGTGCGGCGTGATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCCTTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGAATACTTTGCTTATCCAGCGCCGCAAGGGAGGCCTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGGCCATGCGGGACAACAAATCGCCCAGTTTggagcccgggttggcggggacc > 2:126007/5‑230 (MQ=255) tcttTCAGTAATGGCTCGTTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGAcc < 1:520252/249‑1 (MQ=255) ttcattaagtgCTCGGTGGGGTGTAATGTATCTGTGGCCTGATTCGCGGCGGCACGGGCTTTTTCGACCGTGGCATTAATCGAGGCGGCACCAAACTGTGTCGCGTCAACGCTGCGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGATTCGTACGGGCGCGGGTCGATGCGGAACAGCAAAGCGCCCTTTTTGACTTCCTGGTTGTCTGTGACCGCCa < 2:90128/240‑1 (MQ=255) ttCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGcc > 1:258026/1‑249 (MQ=255) cAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGtt > 1:286858/1‑251 (MQ=255) tAATGGCTCGGTGCGGCGTAATGTATCTGTTGCCTGTTTCGCGGCGGCACGGTCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGGTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGGTTGACt < 2:41995/223‑1 (MQ=255) tAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACt > 1:41995/1‑223 (MQ=255) cGGTGCTGCGGAATGTATCTTTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCTGCACCAAACTTTTGCGCGTCAACGCTCCGCTGGGTGAGCATAATTTGCTTACCCAGCGCCGCGAGGGAGGCTTAAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCGGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCg < 2:286858/250‑1 (MQ=255) ggcgTAATGTATCTGTGGCCTGTTTCGCGGCGGCCCGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTg < 1:126007/251‑1 (MQ=255) taTGTATCTGGGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCATCGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGCACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTc > 2:52533/2‑251 (MQ=255) tATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGt > 1:172151/1‑251 (MQ=255) tcttgggCCTGTTCCGCGGCGGCCCGGGCTTTTTCTACCGGGGCTTGAATCGGGCCGGCCCCAACCTGTTGCGCGTCACCGCTACGCTGGGGGAGCATAAGTTGCGTATCCAGCGCCGGGGGGGAGGCGTCAGCGTTCGCCAGTTTGGCTGCGTACGGGCGCGGGTGGATGGGGAAGATCAAATCGCCCTGTGTGACTCCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCGGCTGACTTCCGGTa < 2:520028/245‑1 (MQ=255) tgtgGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTAcc > 1:210409/1‑250 (MQ=255) ctatttCGCGGCGGCACGGGCTTTTTCTACCGTTGCATTAATCGAGTCGGCACCCAACTGTTGCGCGTCAACGCTACGCAGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAAGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATAGACCTGTTTGAATTCCTGGTTGTCAGTGACCGCCAGGTTTACAAAGCGGCCGATGGCTGCCGGCAACACATcc > 2:462822/4‑249 (MQ=255) cTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTCCTCGAGTCGGCACCAACCTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGAACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTTCCTGGGTGTCGGTGCCCGCCAGTTCTCCAATGAGGCCGCTGACTTCCGGAACCACATCa > 2:385183/1‑250 (MQ=255) gTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAGCTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTGCGTGCGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACATCAATg < 1:371793/251‑1 (MQ=255) ttCGCGGCGGCACGGGTTTTTTCTACCGTGTCATTAAGCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCGGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACATCAATgg < 1:368414/250‑1 (MQ=255) cgcgGCGGCACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTTTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACATCAATGGTAt < 1:65051/251‑1 (MQ=255) cggcggCCCGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCCCCGCTACGCTGGGTGAGCATAATTTGCTTCTCCAGCGCCGCGAGGGAGGCTTCAGCTTTAGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGAGGAACAGCAAATCGACATGTTTGCCTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGACCGCTGACTTCCGGTACCACATCACTGGGATct > 2:530741/1‑251 (MQ=255) ggcggcACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGCATGGCTTCGTACGGGCGCGGATCGATGCGGAACCGCAAATCGCCATGTTTGACTGCCTGGTTGCCGGGGCCCGCCAGTTCTACATAGCGGCCGCTGAATTCCGGTACCACATCAAGGGGATctg > 2:563177/1‑251 (MQ=255) ggcggcACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACCATGCGGCCGCTGACTTCCGGTACCAAATCAATGGTATctg > 2:560833/1‑251 (MQ=255) ggcggcACGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACATCAATGGTATctg < 1:255502/251‑1 (MQ=255) aCGGGCTTTTTCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACATCAATGGTATctgctgccg > 2:97468/1‑248 (MQ=255) tttttCTGCCGTGGCAGTAATCGAGTCGGCACCAAACTGTTGCGCGTAAATGCTATGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTTCGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACATCAATGGTATCTGCTGACGCGTaa < 2:93409/250‑1 (MQ=255) tttCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACATCAATGGTATCTGCTGACGCGTAAGCg > 1:185955/1‑251 (MQ=255) ttCTACCGTGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTgg < 1:185772/172‑1 (MQ=255) accttGGCATTAATCGAGTCTGCTCCACATGGTTGCGCGTCAACGCTCCCTTGGTTGAGCATAATTTGCTTATCCAGCGCGCCGGGGGAGGTGTCAGCTTGCGCCAGATTGGTTTCGTCCGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGCCTGCCTGGTTGTCGTTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACATCAATGGTATCTGCTGACGCGTAAGCGTCa < 2:81691/245‑1 (MQ=255) gTGGCCTTAATCGAGTCGGCACCAACCTGTTGCGCTTCCACGCTCCGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGCCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGCCCAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACTTCAATGGTATCTGCTGCCGCGTAAGCGTCATTatt > 2:292031/1‑249 (MQ=255) tGGCATTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACATCAATGGTATCTGCTGACGCGTAAGCGTCATTAGtt > 1:300287/1‑251 (MQ=255) aTTAATCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCggg < 1:22313/121‑1 (MQ=255) ccGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACATCAATGGTATCTGCTGACGCGTAAGCGTCATTAGTTGATGGCGCa < 1:502704/251‑1 (MQ=255) | GCAATATCCGCTTCGACCGCCGCACGCTGGGCAACTAATGCATCCACGCCGCTGACGGCGCTGGCGGCTGACTGCGCCTGTAACAATACGGCATTAAGATCCGCTTCTGCGGCGCGCTGCGCCGTTCTTGCACGGTCAACATCTTCCGCTGAGACAAAACCTTCTTTCAGTAATGGCTCGGTGCGGCGTAATGTATCTGTGGCCTGTTTCGCGGCGGCACGGGCTTTTTCTACCGTGGCATTAACCGAGTCGGCACCAAACTGTTGCGCGTCAACGCTACGCTGGGTGAGCATAATTTGCTTATCCAGCGCCGCGAGGGAGGCTTCAGCTTTCGCCAGATTGGCTTCGTACGGGCGCGGGTCGATGCGGAACAGCAAATCGCCCTGTTTGACTGCCTGGTTGTCGGTGACCGCCAGTTCTACAATGCGGCCGCTGACTTCCGGTACCACATCAATGGTATCTGCTGACGCGTAAGCGTCATTAGTTGATGGCGCA > NC_000913/4303511‑4304005 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |