| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,301,071 | C→T | A670T (GCA→ACA) | mdtO ← | putative multidrug efflux pump subunit MdtO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,301,071 | 0 | C | T | 90.5% | 107.6 / ‑6.0 | 42 | A670T (GCA→ACA) | mdtO | putative multidrug efflux pump subunit MdtO |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (10/28); minor base G (0/4); total (10/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGGGTCATTGAGTTGTTTCCACCACTGCGCCTGCGGCCAGCCGGAGCTGGCAAGATGAATATCGTCGGCCAGTTTGATTTGTTCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTTCTCCAGGGCGTCGGCAAACTGACCTGCTCTGTCCGGCTGTAGTGCGTTATCCAGCGCCTGCGCCGAGTTCCAGGTGGCATCCCAGGCGTGAAG > NC_000913/4300830‑4301317 | cGGGTCATTGAGTTGTTTCCACCACTGCGCCTGCGGCCAGCCGGAGCTGGCAAGATGAATATCGTCGGCCAGTTTGATTTGTTCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGCGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGt > 2:155820/1‑251 (MQ=255) gAGTTGTTTCCACCACTGCGCCGGCGGCATGCCGGAGCTGGCAAGATGAATTTCGTCGGCCAGTTTGATTTGTGCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTgg < 2:223692/251‑1 (MQ=255) gcgcCTGCGGCCAGCCGGAGCTGGCAAGATGAATATCGTCGGCCAGTTTGATTTGTTCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAg < 1:2030/249‑1 (MQ=255) gcgcCTGCGGCCAGCCGGAGCTGGCAAGATGAATATCGTCGGCCAGTTTGATTTGTTCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCt < 1:554338/251‑1 (MQ=255) gatgcTGCGGCCTGCGGGAGCTGTCAAGATGCGTCTCGTCGGCCCGTTTTAATGGTTACGTTTTTCGCTGTTGATGAGGTGCAGAACTCTTACGTACCAGGGCACCACCGGAAATCGGCGTCGGGCTGCCGATACTGCTGCACCACAGCAGACGTGAAAGTTGACGATTGATCATGGCGTGGCTCCTTGGGCCTGTTCCGCAGCGGGCTTTAATGTCGGGGCTGTCCAGCCTgtcaggctggctaaata < 2:117280/245‑17 (MQ=255) gCCGGAGCTGGCAAGATGAATATCGTCGGCCAGTTTGATTTGTTCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGGGTTAATGTCGGGGCGTTCCAGGCTTGCCAGCggggggaaaagtgggagagcatgtg > 2:270535/1‑229 (MQ=255) gCTGGCAAGATGAATATCGTCGGCCAGTTTGATTTGTTCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGTCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTg < 1:228519/251‑1 (MQ=255) tGGCAAGATGAATATCGTCGGCCAGTTTGATTTGTTCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGGGTTGCTCCTggt > 1:416938/1‑249 (MQ=255) tGAATATCGTCGGCCAGTTTGATTTGTTCAGGATTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGAACAGCCGGCCATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTAGGGGCTGTCACGTCTGGCAAGGGGGCGAAAAACTGGCAGACGGGtttcacatggtttaata > 1:200934/1‑234 (MQ=255) tcgtcgGCCAGTTTGATTTGTTCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTTGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AAAAAggggggg > 1:220330/1‑250 (MQ=255) cgtcgGCCAGTTTGATTTGTTCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCCGTCTGGCCAGCGGGCGGAAAGCTGGCAGACGTGTTGACCCTGTTTT‑AATAAGGTGGGcc > 1:315035/1‑250 (MQ=255) ggcgGCCAGTTTGATTTGTTCCGGTTTGAGCTTTGGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGGTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAAGGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAg < 2:51347/249‑1 (MQ=255) cAGTTTGATTTGTTCCGGTTTGAGCTGTTGCTGCGGTGCAGCCTCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTTTCCAGTCTGGCAAGCGGGCGGAACGCTGGCAGACGTGTTTCTCCTGTTTT‑TATACGGTGGGCAGGATGGc > 1:441099/1‑251 (MQ=255) ttGTTCCGGTTTGATCTGTTGATGAGGTGCAGAATCCGTACGTACCAGGGCCCAGCCGGAATGCAGCGTCGTGCTGCCGAGAATGCTGCACATCAGCAGACGTGAAAGTTGACGATTGAGCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAgg < 2:497622/250‑1 (MQ=255) gTTCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGGAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTTAATA‑GGTGGGCAGGATGGACTGAGAGGCgg > 1:401216/1‑251 (MQ=255) tCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGGCCAGTCTGGCAAGCGGGCGAAAAGCTAGCAGACGGTTTGCTCCTTTTTT‑AATAAGATGGGCAGGATGGCCTGGGCGGCgggg > 1:51217/1‑250 (MQ=255) gttggAGCCGTTGATGGAGTGCAGAATCCTTCCGTACCAGGGCACAGCCGGAAAGCAGCGTCGTGCTGCCGTGAATGCTGCTCAACAGCAGACGTGAAAGTTGACGATTGTTCATTGCGTGGCCCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCCGGATGGCCTGAGCGGCGGGTGtct < 2:114849/247‑1 (MQ=255) tGAGCTGTTTATGAGGTGCAGAAGCCTTACGTTCCAGGGCCCAGCCGTAAATCAGGGGCGTGCTGCCGAGAATGCTGCACAACATCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTctct < 2:341059/250‑1 (MQ=255) tGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTctct < 1:115625/250‑1 (MQ=255) gAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCtt < 1:397486/250‑1 (MQ=255) gTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGTGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGGCGGGGCTGTCCAGGCTGGCAATCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGc < 1:327509/250‑1 (MQ=255) gTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCg < 1:409400/251‑1 (MQ=255) gatgaGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGtt < 1:270535/250‑1 (MQ=255) gatgaGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGtt < 1:457012/250‑1 (MQ=255) aaTCGTTACGTCCCAGGGCACATCCGGAAATCAGCGTCTAGCTTTCGAGAAAGTTGCTCACCAGCAGACTTGAAAGTTGGAGAGTGATCATTGCGTGGCACCTTGTGCCTGTCCCGGGGCGGGCGTTAATGTCGGGGCTGTCCATTCTTGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGTCAGGATTGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAAc < 2:503956/251‑1 (MQ=255) gTACCAGGGCACAGCCTGAAAGCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGTCGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGt < 1:252816/250‑1 (MQ=255) aCCAGGGCACAGCAGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTTGCCAGCGGGCGGAAACCTGGCAGGCGTGTTg > 1:415227/1‑169 (MQ=255) ggCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGc < 1:271604/219‑1 (MQ=255) gacGGAAAGCAGCGTCGTGCGGCCGAGAATGCAGCACAACAGCGGACGTGAAAGTTGACGATGGAGCATTGCGTGGCTCTGTGTGCCGGTTCCGGGGCGGGAGTTAATGGCGGGGCTGTCCAGTCGGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCAGGTTG‑AATATGGTGGGCAGGAGGGCCTGAGAGGTGGGGGTCTCTTCAATCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGAca < 2:51217/249‑2 (MQ=255) cgtGCAGCCGAGAATGCTGCCCAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTtct < 2:362195/250‑1 (MQ=255) gctgcCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTTCTCCAg < 1:113945/251‑1 (MQ=255) gaATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTTCTCCAGGGCGTCgg < 1:474917/251‑1 (MQ=255) gACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTTCTGCAGGGCGTCGGCAAACTGACCTGCTCTGTCCGGCTGTAGTg < 1:158439/251‑1 (MQ=255) aCGATTGATCATTGCGTGGCTCCTTGTGCCTGTGCCGGGGCGGGCGTTAATGGCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTTCTCCAGGGCGTCGGCAAACTGACCTGCTCTGTCCGGCTGTAGTGc < 2:327210/251‑1 (MQ=255) gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTTCTCCAGGGCGTCGGCAAACTGACCTGCTCTGTCCGGCTGTAGTGCGTTAt < 1:479015/250‑1 (MQ=255) cATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTTCTCCAGGGCGTCGGCAAACTGACCTGCTCTGTCCGGCTGTAGTGCGTTATCCa < 1:155820/250‑1 (MQ=255) gcgtgtcgcctggtgCCTGTTCCGTGGCGGGAGTGAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATGTGAGGAGAACGGCTGAGTTCGGTTGCCAGACCGGCAGCGTATTTGTCCAGGGCGTCGGCAAACTGACCTGCTCTGTCCGGCTGTAGTGCGTTATCCAGCGcc < 2:373175/239‑1 (MQ=255) gggCTCCTTGGGCCTGTTCCGTGGCGGGCGTTAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTGT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTTCTCCAGGGCGTCGGCAAACTGACCTGCTCTGTCCGGCTGTAGTGCGTTATCCAGCGCCTgc < 1:299716/250‑1 (MQ=255) ggCTCCTTGTGTCGGTTCCGTTGCGGGCGTGAATGTCGGGGCTGTCCAGTCTGGCAAGCGGGAGAAAAGCTTGGAGCCGTGTTGCTTCTGTTTG‑AAGAAGGTGGGCAGGATGGCCTGAGATGCGGGTGGCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTTCTCCAGGGCGTCGGCAAACTGACCTTCTCTGTCCGGCTTTAGTTCGTTATCCAGCGccggc < 2:433556/250‑4 (MQ=255) aaTGTCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTTCGCCAGGGCGTCGGCAAACTGACCTGCTCTGTCCGGCTGTAGTGCGTTATCCAGCGCCTGCGCCGAGTTCCAGGTGGCATCCCAGGCGTgaag < 1:173440/251‑1 (MQ=255) aaTGTCGGGGCTGGCCAGTCTTGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTTCTCCAGGGCGTCGGCAAACTGACCTGCTCTGTCCGGCTGTAGTGCGTTATCCAGCGCCTGCGCCGAGTTCCAGGTGGCAGCCCAGGCGTgaa < 1:127270/250‑1 (MQ=255) aaTGGCGGGGCTTGCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGTCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCATCGTATTTCTCCAGGGCGTCGGCAAACTGACCTGCTCTGTCCGGCTGTAGTGCTTTATCCAGCGCCTGCGCCGAGTTCCAGGTGGCATCCCAGGCGTgaa < 2:220330/250‑1 (MQ=255) | CGGGTCATTGAGTTGTTTCCACCACTGCGCCTGCGGCCAGCCGGAGCTGGCAAGATGAATATCGTCGGCCAGTTTGATTTGTTCCGGTTTGAGCTGTTGATGAGGTGCAGAATCCTTACGTACCAGGGCACAGCCGGAAATCAGCGTCGTGCTGCCGAGAATGCTGCACAACAGCAGACGTGAAAGTTGACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTT‑AATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTGCCAGACCGGCAGCGTATTTCTCCAGGGCGTCGGCAAACTGACCTGCTCTGTCCGGCTGTAGTGCGTTATCCAGCGCCTGCGCCGAGTTCCAGGTGGCATCCCAGGCGTGAAG > NC_000913/4300830‑4301317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |