| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,850,507 | C→T | A74T (GCG→ACG) | uhpA ← | DNA‑binding transcriptional activator UhpA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,850,507 | 0 | C | T | 94.6% | 216.1 / ‑6.2 | 75 | A74T (GCG→ACG) | uhpA | DNA‑binding transcriptional activator UhpA |
| Reads supporting (aligned to +/- strand): ref base C (2/2); new base T (35/35); total (37/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCACCGCCATTCCTTGCGCCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTAAA > NC_000913/3850261‑3850747 | tCACCGCCATTCCTTGCGCCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCAt > 1:534220/1‑250 (MQ=255)cccccGCCCTTCCTTGCGCCAGATTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCGCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATa < 2:509128/248‑1 (MQ=255) ccGCCATTCCTTGCGCCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGTACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCt < 1:458339/251‑1 (MQ=255) gCCATTCCTTGCGCCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCttt < 1:431222/251‑1 (MQ=255) ccATTCCTTGCGCCAGTTTTTCCGCCCCCGTGCGTTCACGTTTGGTTGGCGGGTACGGACGTCCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCACCCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTc < 2:166888/251‑1 (MQ=255) tCCTTGCGCCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGACAGAAAGCCGCGTGCCCCCGCGTTAAGCGACTGCTCAACCAGCGCAGGACTGTCGTGATCGGAGAGCATAATCGTCGCAATACATTTCGGc > 2:153583/1‑250 (MQ=255) cTTGCGCCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGc > 1:411281/1‑251 (MQ=255) cgcCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGc > 1:371378/1‑251 (MQ=255) tgaaattCCGCCACCTGGCGATCACGTTTGGTTAGCGGGTCCTGTCGACCGGATGCCAGTTTAATGGCACTCTCCGGCGTCAGATAACAGACGCCCGTGGCAAACGTATGCACCGCAGCAATGAGTTCATCCGGGATACAGCGTTTGGGAAGAAAGCCGCGTGCACACGCGTTAAGCGCCGGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATATTCGTCGTCATCCCGTTCGGCAgaaggcttcg > 2:398233/6‑242 (MQ=255) cgTTTTTCCTCCACCTGGCGTTCACGGTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTag < 2:86418/250‑1 (MQ=255) ccccTGGCGTCCATGTTTGTTTGGCGGGCCCTGACGACCGGATGCCAGTTTAATGGCAAGATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTCTGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAATGAACGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGGCGTGAACGGAGAGCATAAGCTTCGTCATACCTTTCGGCCGCTGGCGTGGCAGCTCCAG‑Ac < 2:98370/249‑1 (MQ=255) cTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCACTATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACAGCAGCAATGAGTTCCTCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCgg > 2:232116/1‑251 (MQ=255) gCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGgaga < 1:289592/251‑1 (MQ=255) gTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGATAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGat > 1:105691/1‑250 (MQ=255) gTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGc > 1:13975/1‑251 (MQ=255) ttGGTTAGCGGGGCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCAGCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCa < 1:90261/250‑1 (MQ=255) tGGTTGGCGGGTCCTGACGACCGGATGCCAGTTTAATGGAAATATCCGGCTTCAGATAATAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATACGGGCTACAGCGGTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAAGCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCAt < 2:233337/250‑1 (MQ=255) gggTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATc < 1:151593/251‑1 (MQ=255) cgacCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGCGATATCGCAAATac > 2:498978/1‑250 (MQ=255) gATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACCC‑ACCTg < 1:101100/251‑1 (MQ=255) gcctgTTTAATGGGATGATCCGGAGTCAGATACCCGACGCCCGTGGGAACCGTATGCACCGCAGCAATGAGTTCCGCCGGGCTACAGCGGTTGGAAAGCAAGCCGCGTGCTCCCGCGTTAAGTGTCTGCTCAACCAGCTCAGGACTGGCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACTGGAGAGATAGGGCATGGAGAGATCGCAAAtccttacctgctc < 2:207137/247‑13 (MQ=255) gCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGCGATATCGGGCATGGAGATATCGCAACTACAA‑ACCTGccc > 2:1626/1‑249 (MQ=255) aaTGGCAATTTCCGGCGTCAGATAACAGCCGCCCGTGGCATCCGTATGCACCGCAGCAATGAGTGCATCCGGGCTACAGCGGTTGGAAAGAAAGCAGCGTGCCCCCGCGTTAAGCGCCTTCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGACGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACCCCgcgca < 2:150160/251‑2 (MQ=255) gCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCgg > 1:138957/1‑251 (MQ=255) aaTATCCGGCGTCAAATAAAAGCCGCCCGTGGCAACCGTATGCAACGCAGCAATGAGTTAATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTACCCCCGCGTTACGCGCCTGCTCAACCAGCGCAGGACTGTCGAGAACGGCGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCTG‑GCCGGAGATATCGGGCATGGAGATCTCGCAA‑TTCACCACCTGCACCCCGCTcccacgc > 2:104258/1‑246 (MQ=255) tatCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGata > 2:158895/1‑200 (MQ=255) tatCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGata < 1:158895/200‑1 (MQ=255) cGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCa < 1:65219/251‑1 (MQ=255) tAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTc > 1:103045/1‑251 (MQ=255) aaCAGCCGCCCGTGGCAACCGTATGCAGCGCAGCAATGAGTTCATCAGGGCTACAGCGATTGGCAAGAACGCCGCGTGCCCCCGCGTAACGCGCCTGCTCAACCAGCGCCGGACTGTCGTGAACGGAGAGCCTCATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATCTCGGGCATGGAGATCTAGCAACTACCT‑ACCTGCACAACGCGCCCCGGC‑GCCCCAGCCGGCGccacg > 2:83283/1‑248 (MQ=255) aaCAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCAGCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATAC‑TTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑CCCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTcgc < 1:76101/251‑1 (MQ=255) cAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTAGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTcgcg > 1:507452/1‑251 (MQ=255) cgccccGTGGCAACCGAAGGAACCGCAGCAAGTAGTAGATCGGGGCCACAGCTTTTGGAAAGAACGCCGCGTGCCCCCGCGTCAAGCGCCGGCTCAGCCAGCGCAGGCCGGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCATCCCCGG‑ACCGGAGATATGGGGCATGGAGATATCGCAAACACAC‑ACCTGCACACCGCGCCCGGGCAGCCCC‑GCCAGCGCCTCGCGcca < 2:105691/248‑2 (MQ=255) cgccCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATc > 2:483669/1‑196 (MQ=255) cgccCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATc < 1:483669/196‑1 (MQ=255) gccCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCg > 1:35299/1‑251 (MQ=255) cGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGcac < 1:484425/210‑1 (MQ=255) cGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGcac > 2:484425/1‑210 (MQ=255) ggCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTCCAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGCGATATCGCAAATAAAC‑CCCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCgcccccc > 2:498435/1‑245 (MQ=255) aaCCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCACGAACCaaccc > 2:91490/1‑248 (MQ=255) aCCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCAGAACCAAACTc > 2:195390/1‑251 (MQ=255) gcagcaATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTg > 1:198683/1‑251 (MQ=255) ccagaaaTGAGTTCTGCCGGGCAACAGCGTTGGGAAAGAAAGCCGCGTTCCCCCGCGTTAAGCGCCTGCCCACCCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGCCTTCATACCTTTCGGCAGCTGTCTTAGCAGCTCCAG‑ACCGGAGATACCGGGCATGGAGATACCGCAAATACAC‑CCCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTg < 2:411281/246‑1 (MQ=255) aTGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATc > 1:550235/1‑251 (MQ=255) aTGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATc > 1:187057/1‑251 (MQ=255) tGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATc > 1:544189/1‑250 (MQ=255) aGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAgg > 1:107369/1‑251 (MQ=255) ccGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGc < 1:153208/251‑1 (MQ=255) gggCTACAGCGTTTTGAAAGAAAGCCGCGTGCCCCCGCGTTACGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATACTCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATCCAC‑ACCTGCACACCACGCCCCGTCGGCCCC‑GCCAGAGCCTCGCACACCACGCCACACTCGGCAACGACCTGCacatacggttaccgccc > 2:131176/1‑235 (MQ=255) ggccTACAGCTTTGGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCTCCGGCTCAACCAGCGCAGGACGGTCGTGAACGGAGATCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTTGCAGCCCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACCC‑ACCTGCACCCCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTTCA‑AATCAGGTTCCAGccc < 1:144659/248‑1 (MQ=255) tACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTcc < 1:126044/122‑1 (MQ=255) tACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTcc > 2:126044/1‑122 (MQ=255) ttGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTgcgc > 1:116165/1‑251 (MQ=255) gaaagaaaGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACCC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCaaa < 1:320309/251‑1 (MQ=255) agaaagCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGcc < 1:243378/251‑1 (MQ=255) ccGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGAATAATCGTCGTCATACCTATCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACATGCACACCGCGCCACGGCAGCCCC‑GCCAGCGCCTCGCGCCCCAAACCAAACACGACAACTACCT‑CACAATCACGGTACACCCCAAGCAGCTTCGCAAAGCCGGaacg > 2:314505/1‑248 (MQ=255) gCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGAt < 1:91490/251‑1 (MQ=255) gTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGAt > 1:291709/1‑251 (MQ=255) gTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCGGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGAt < 1:232116/251‑1 (MQ=255) aGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑CCCGGAGATCACGTGCATGGAGATATCGCAAATACAC‑ACCTGCCCACCGCGCCCCGGCAGCCCC‑GCCAGCGCCACGCGCCCCGAACCAAACCCGGCACCTACCTGCA‑CATCAGGTTCCAGCCCCAGCAGCTGCGCCAAGCCGGAGCGGaaactgagggggccgac > 2:27071/1‑235 (MQ=255) gccccTGCTCAACCAGCGCAGGACAGTCGTTAACGGAGAGCATAATCGTCGTCATACCTTGCGGCAGCTGGCTTAGTAGCTCCAG‑TTCGGAGATATCGGGCAGGGAGATATCGCAAATTCAC‑ACCTGCCCACCCCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACGCTGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACTATGAGGTGATCGTCt < 1:509938/248‑1 (MQ=255) gcCTGCTCAACCAGCGCAGGATTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCtat < 1:498978/251‑1 (MQ=255) gcCTGCGCACCCAGCGCAGGACGGTCGTGAACGGAGAGAATAAGCGGCGTCATCCCTTTCGGCAGCGGGCTGAGCAGC‑CCAGGCCCGGAGATATCGGGCAGGGAGATATCGCAAATCCAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCtat < 2:213391/251‑1 (MQ=255) cccTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGCCGTCATACCTTCCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATCCAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCtat < 1:207596/250‑1 (MQ=255) cTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAACCCGGAGCGGACggtgcggggggcgtctata > 2:211416/1‑232 (MQ=255) ccAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTGCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACCCCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGc < 1:529334/250‑1 (MQ=255) cAACCAGCGCAGGACTGGCTGGAACGGAGAGCCTAACCGGCGTCATCCCTTGCGGCAGCTGGCTTAGCAGCCCCAG‑ACCGTAGATATCGGGCATGGAGATACCGCAAATACAC‑CCCGCCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCa < 2:107369/251‑1 (MQ=255) aaCCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCa > 1:523489/1‑250 (MQ=255) ggACTGTTGGGAACGGAGAGCAAAATCGTCTTCCTCCCTGTGGTCAGCGGGCTTAGCAGCTCCAG‑ACCGGGGATATAGGGCATGGAGATATCCCAAAAACCC‑CCCGGCCCACCCCCCCCCGCCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCAt < 2:371378/251‑1 (MQ=255) tCGTGAACGGAGAGCATAACCGTCTGAATACCTTGCGGCAGCTGCCTTAGCAGCTCCAG‑ACCGGCGATACCGGGCATGGAGATTTCGCAAATACGC‑ACCTCCACACCGCGCCCCGCCATCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGTCGATGAGGTGATCGTCTATAAGCGCAACGGTGATCATGGTCt < 1:20763/250‑1 (MQ=255) gTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCACACTCGGCAACTACCTGCA‑AATCAGGTTCCCGCCCCAGCAGCTGCGCAAAGCCGGCGCGGACGATGAGGGGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGt > 2:147785/1‑251 (MQ=255) gagaGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCg > 1:63008/1‑251 (MQ=255) gCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTa < 1:181070/251‑1 (MQ=255) cATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTaa < 1:152634/251‑1 (MQ=255) aTAATCGTCGCCATCCCTTCCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCTTGGAGATATCGCAAATCCCC‑TCCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTaaa < 1:94210/251‑1 (MQ=255) | TCACCGCCATTCCTTGCGCCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAG‑ACCGGAGATATCGGGCATGGAGATATCGCAAATACAC‑ACCTGCACACCGCGCCCCGGCAGCCCC‑GCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCA‑AATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTAAA > NC_000913/3850261‑3850747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |