| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,834,845 | C→T | S362N (AGT→AAT) | yicJ ← | putative xyloside transporter YicJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,834,845 | 0 | C | T | 98.6% | 217.4 / ‑4.2 | 72 | S362N (AGT→AAT) | yicJ | putative xyloside transporter YicJ |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (38/33); total (39/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.98e-01 | |||||||||||
CCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACATTTCCAGTCGGTCAGAGGTTTTGCCAGTGCGG > NC_000913/3834603‑3835091 | ccAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGAAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCg > 1:503434/1‑251 (MQ=255) cAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGCGACAGCACACTTGATCCCgg > 2:272275/1‑251 (MQ=255) tAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGttt > 1:555499/1‑250 (MQ=255) aCGGTTTTCAGATTGTGCGTCGGGAGTGATAAGGAGGGTTAAGCGATAACCGCGCTCAGCAAATAAAAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGTTAATCGGGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTAcc < 1:291923/251‑1 (MQ=255) cAGATTGTGCGGCGTGAGTGAGGAGTAGCGTTTAGCGATAATCGCGCTCAGAAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGcac < 1:68747/250‑1 (MQ=255) gtgcggtgtgagtggGGAGTAGCGTTCAGCGAAAAACGCGCCCAGCAAATAAGATATCGCCGGAAAAAGCGTGAATAGCGCAATAATTATGCTAATCTGGGCGTAGTACAGCGCTTTCTCTGCCATCTTATACCC‑GCCCTAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCTCTCGc < 2:96064/244‑1 (MQ=255) gCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGACCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGGGGCGCTGTCCTGCTCTTTTTCGGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCg < 1:54049/251‑1 (MQ=255) gtcgtGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGAGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGt > 1:294034/1‑250 (MQ=255) agtgagtAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGAc > 1:561415/1‑251 (MQ=255) agtagtAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGt > 1:153078/1‑250 (MQ=255) agtagCGTTTAGCGATAATAGCGCTCAGCAAATAACAGAACGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTAGCGCTGATCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATTAGAGTGCCGCCGCAGGCCAACCCCAGTTAGAGCACAAACACCGTGCCATCAAAATTGATCCAGGTTAAGCGTATACCATTTCATCAATCCCCGTAGTAGACGTTAttg > 2:153239/1‑249 (MQ=255) gtagCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCgg > 1:399750/1‑251 (MQ=255) gggTTTAGCGAAAATCGCGCTCAGCAAATAAAAGATCGCCGGAACAATCGTGAAGAGCGAAATAATGATGCTAATCGTGGCGTTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGAca < 1:488898/249‑1 (MQ=255) tAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGCCATACTTACCCAc > 2:266050/1‑251 (MQ=255) tAATCGAGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGACAACACCAGTTTGAGCACAAACAGCGTGCCAGCAACATTGATCCAGGTCAGGCGTTTACCATTGCACAACTCGCCGTCATAGACGGTATCGGCCACCATTACCCAc > 2:531721/1‑251 (MQ=255) aaTCGCGCTCAGCAAAAAACAGAGCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATAGAGGAGCTGTTCTGCGCTTTTTCTGACGCATCATAACC‑GACATAAGACAGCATACAGCCGATAAGAGCGCCGCCGAAGGCAAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGACGTTTACAATTGAACCACTCGCCGTAGACGACggaaaaggacatactgacccacc > 2:455711/1‑230 (MQ=255) aaTCGCGCTAAGAAAATAACAGAAGGCAGGAACAATCGGGAATGGAGCAATAATGAAGATACTCGGTGCGCTGTTCGGCGCTTTTTCTGCCGCACAATACCC‑GCCATAAGCCAGCATACAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTGTGAGCACAAACAGCGGGCCATCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTTCCCACt < 1:356729/251‑1 (MQ=255) aTCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTCTCGGCCATCATTACCCACTg > 1:338831/1‑251 (MQ=255) agcgcACAGCAAATAACAAATCGCCGGAACAATCGTGCATAGCGCAATAATGCTTCTAACCGTGGCACTGTTCTGAGCTTTTTCTTACGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAATCGAGCCGCCGAAGGCCAACCCCAGTTTGAGAAACACCAGCGTGACAGCAAAATTGATCCCGGCCAGACTTTTACCATTGCACCACTCGCCGACGTCGACAGTCACGGCCATCGTTCCCCACTgg > 2:58065/2‑250 (MQ=255) caacaaaaaaacagacgcccgaaaCAAGCGTGAATAGCCCAATATTGATGCAAACCGGGGCCCTTTTCGGCGTTTTTTCTCCCGAATAATACCC‑GCCATAATCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCTTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAg < 2:555499/227‑1 (MQ=255) acaaaaaaaaaGATCGCCGGAACAAGCGTGAATAGCGCAATAAGGATGTTAATCGTGGCGTTGTCCTGCACTTTTTCGGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGgtgt < 1:338439/241‑1 (MQ=255) aaaTAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCAc > 1:177578/1‑251 (MQ=255) cAGATCGCCGGAACAATCGAGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGCGCGCCGCCGAAGGCCAACCCCAGTTTAAGCACCATCAGCGTGCCAGCAAACTTGATCACGGTCAGGAGTTTACCATTGCACCACTAGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGTTAGGTGTCACCAGTTg > 1:537323/1‑251 (MQ=255) tCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGc > 1:57115/1‑251 (MQ=255) ccGGAACAATCGTGACTAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCAGCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCAAGTTTGAGCACCACCAGCGTGCCAGCAACATTGATCCCGTTAAGTCGTTTACCATTGCACCACTCGCCGACGTCGACGGTATCGGACCTCATTACCCACTGGGTAggataccacagttgatgcca > 2:18555/1‑232 (MQ=255) ccGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAac > 1:216071/1‑251 (MQ=255) cGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAac > 1:197172/1‑250 (MQ=255) aCAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACAcc > 2:75208/1‑251 (MQ=255) cAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAACCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGAACAACCAGAGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGAATCGGCCCTCATTCCCCACTGGATAGGTGTCACCAGTTGATGCCCCACAccc > 2:163720/1‑250 (MQ=255) tCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGATCAGGCGTTTACCATTGCACAACTCGCCGTAGTCGACGGTATCTGACATCATTACCCACTGGCTAGGTGACACCAGTTGATGCAACACACCCATc > 2:179659/1‑251 (MQ=255) cGTGAATAGCACAATAATGATGCTAATCGGGGCGTTGTTCTGCGTTTTTTCGTCCACATAATTTCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCa < 1:462754/251‑1 (MQ=255) aaTAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGTTTTTTCTCCCGCATCATACCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGaa < 1:64018/251‑1 (MQ=255) gcgcAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATg > 1:52965/1‑251 (MQ=255) tAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGAAAAACaaagg > 2:456759/1‑246 (MQ=255) ccggggcgtttgttgtcgttttttCTGCCACTTCATTACC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCTTTTTCCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATg < 1:372580/232‑1 (MQ=255) gggggCGTTGTCCTGCGCTTTTCCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGc < 1:381572/248‑1 (MQ=255) cGTGGCGCGTTTCTGCGTTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGc < 1:272593/251‑1 (MQ=255) ggcatgtttctggtcTTTTTCGGCCGC‑TTATATCCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATTAAGACAAACATAGTGATGCTgg < 2:246774/237‑1 (MQ=255) cgcTGTACTACGCTTTTTCGGACACATCAAATCC‑GCCATACGCCAGCATCCAGCCGATAAGAGCGCCACCGAAGGCAAACCCAAGTTTGAGCACAAACAGCGTGCCCGCAAAATTGATCCCGGTCAGGCGTTTCCCATTGAACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGACAGGTGTCACCAGTTGAGGCACCACACCAATCACGAATAAGAAGACAAACATAGAGATGATGGcc > 2:271440/1‑251 (MQ=255) tttgtcggCCGCATAATACCC‑CCCAAAAGCCCGAAACCAGCCTATAAAAGCGCCGCTGAAGGCCAACCCCAGTTTGAGCACAATCATCGTGCCGGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTGGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGTTTGCATGGGAAc < 2:560579/242‑1 (MQ=255) ccgcatcaacccc‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCCCAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATc < 2:216071/240‑1 (MQ=255) gCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATcgc > 1:97889/1‑251 (MQ=255) cccatttccc‑GCCATAAGCCAGCAACCAGCCGATAATCGCTCCGCCGAACGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGTAAAATTGATCCCGGTCAGGCGGTTACCATTGCACCACTCGCCGTAGGCGACGGTATCGGACATCATTACCCACGGGATAGGTGTCACCAGTTGATGTAACACACCAATCACGAAGATGAATACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATcgcg < 2:542985/243‑1 (MQ=255) cagctacccccccctaaatccgtcctCCAGCCGAGAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCCCAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATcgc < 2:314063/226‑1 (MQ=255) tcatATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATCGTGATGCTGGCCTGCATGGGAACAAAGAACATcgcg > 2:210062/1‑249 (MQ=255) catATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAg > 1:64718/1‑162 (MQ=255) catATCA‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCCAACTTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAacac > 2:229910/1‑184 (MQ=255) caatctccaccATAAGCCCGTACCCAGCCGATAAGCGCGCCACCGAATGCCAACCCCAGCGGGTGCTCAAACCGCGTGCCAGCAAAATTGCCCCCGGTCGGGCGTGTTCCTATGCACCACTCGCCGTAGTCGACGGTATCGGACATCAATACCCACTGGATAGGAGTCACCAGTTTATGCTACACACTAAGCACTAATAGGAAGACAAACATAGTGATGCGGGCCTGCATTGGAACAAAGAACACCGCGAg < 2:338831/242‑1 (MQ=255) caaatCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAacac < 1:229910/181‑1 (MQ=255) accccactataagcctgccgccAGCCGATAAGAGCTCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGGACCAGCAAAATTTCTCCCGTTCAGGCTTTTACCATTTCCCCACTCGCCGAAGTCGACTGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATCAAGACAAACATAGTGATGCTTGCCTGCATTGGAACAAAGAACATCGCGAGGc < 2:215552/230‑1 (MQ=255) c‑GCCATATGCCAGCATCCAGCCCATAAGAGCGCCGCCGAAGGCCAACCCCAGGTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATc < 1:418981/251‑1 (MQ=255) aTAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAATTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATc > 2:202557/1‑235 (MQ=255) aTAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAATTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATc < 1:202557/235‑1 (MQ=255) agccagcagccctccgtgaagtggtccgccgAAGGCCAACCCCAGTTTGAGCACAAACAGCGGGGCAGCAAATTTGTTCCCGGGCAGGCGGTTACCATTGCACCGCTCGCCGTAGTCGACGGTATCGGACACCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAAGCACTAAGATGAAGACAAACATAGGGATGCGGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCca < 2:501708/226‑1 (MQ=255) aGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCca < 1:266050/251‑1 (MQ=255) aGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCca < 1:93854/251‑1 (MQ=255) ccAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCcagc > 1:196353/1‑251 (MQ=255) cccAGCCGAAAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCg < 2:126551/250‑1 (MQ=255) aaGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGAACAAACAGCGGGCCAGCAAAATTGATCCCGGTCAGTCGTTTACCAGTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCTCTGCCAGCAGGGCGTTCGTccacc < 2:414831/251‑1 (MQ=255) agagCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTccacc > 1:478336/1‑250 (MQ=255) gcgcCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCagaa < 1:210062/251‑1 (MQ=255) gccgcgGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGGTCGTCCACCagaaga < 1:439856/251‑1 (MQ=255) gccgAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAg < 1:456759/251‑1 (MQ=255) ccgAAGGTCAAACCCAGTTTGAGCACAAACAGCGTGCCATCAAAATTGATCCCGGTCAGGCTTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACGGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAga < 2:32102/251‑2 (MQ=255) gTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGACCACCAGAAGATAGAGACTTTACATTTcc > 1:513935/1‑249 (MQ=255) cacaAACGGCGAGCCAGCAAAATTGATCCCGATCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGCAGATGAAGACAACCATAGTGATGCTGGCCTGCATGGCACCACAGAACATCGCGAGGCTAATAAATGCCAGACGGGCGGTCGTACACCAGAAGATCATGGCTTTCCATTTCCAGTGGGTc > 2:72661/1‑250 (MQ=255) aaaCAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACATTTCCAGTCGGTCag > 1:348575/1‑249 (MQ=255) aGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGCACATAGCGACGCTAATCCCTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTAAATTTCCAggatggcagagggtt > 2:437798/1‑237 (MQ=255) aGCGTGCCAGCAAAACTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCCCCAGTTAATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACACAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCCCCAGAAGATAGTGACTTTACATTTCCAGTCGGTCCGAGGttt > 2:259732/1‑251 (MQ=255) gggTGCCATCAAAATTGATCCGGGTCAGGCGTTTACTATGGCACCCCGCGCCGTAGTCGACGGTATCGGACATCATTTCCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAAGCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGCCTTTACATTTCCAGTCGGTCAGAGGtttt < 2:484689/249‑1 (MQ=255) ccAGCAAAGTTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACAGCATTCCCAACTGGATCGGTGTCACCAGTTGATGAAACACACCAACAACGAAGATGAAGACAAACATAGTGATGCTGACCTGCATGGAAACAAAGAACATCTCGAGGCTAATCACTGCAAGCGGGACGTTCGTCAACCAGAAGCTAGTGACTTTACATTCACAGTCGGTCAGGGGATTTGca > 2:302412/1‑248 (MQ=255) aaaaTTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGACGTAGTCGACGGTATCGGACATCATTAACCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGACGATGAAGACAAACATAGTGATGCTGGCCTACATGGGCACAAAGAACATCGCGAGGCTACTCACTGCCAGAAGGGCGTTCGTCAACCAGAAGATAGTGAATTTACAATTCCAGTCGGTCAGAGGTTTTGCCAGTGCgg > 2:413884/1‑251 (MQ=255) | CCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCC‑GCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACATTTCCAGTCGGTCAGAGGTTTTGCCAGTGCGG > NC_000913/3834603‑3835091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |