| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,803,453 | C→T | E229K (GAA→AAA) | waaB ← | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,803,453 | 0 | C | T | 100.0% | 89.5 / NA | 27 | E229K (GAA→AAA) | waaB | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (20/7); total (20/7) | |||||||||||
AATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAACTCTTTTCTGGCCTTCAAATTTCATACGCCCAACATAAATAAACGTTGCCGTTTCACCTTCCTCGGGCGCGGGAATGACTGAGTCTTTAGTTTCGACGGGATTAAAAATAACATTTATCGTCGATTCTGCTACACCT > NC_000913/3803211‑3803691 | aaTATCTCCCGGTTGATACAGATGGCCATTCACATCAGGATGAATAAAGTCAGCAGGCCCGCAGACACAATCGGCACTGCTACCAGGAATCCCCCACGACAAGGCTTCAAGTAGGGCCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTATTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACCATTCGATCATCAATATTTAATTTTCTACCAt > 1:138332/1‑251 (MQ=255) atatCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACCAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTAcaat > 1:327940/1‑247 (MQ=255) tatCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCACGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGCCAATTCGATCATCAATATTTAATTTTCTACCATa > 2:346169/1‑250 (MQ=255) tctcCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGCTGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGc > 1:503243/1‑251 (MQ=255) aCAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCg > 1:526073/1‑251 (MQ=255) cctttGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCgg > 1:534363/4‑250 (MQ=255) aGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGCTATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCAccc > 1:407714/1‑250 (MQ=255) tGAAAAATGTCAGCAGTCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCAAGACAAGGCTTCAAGTAGTGTCATTGGGAAACCTTCAAAAGATTACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATa < 2:431988/250‑1 (MQ=255) cggCCCGGAGACACCATAGGCACTGGTACAAGGAATCAACCACGACAAGGCTTCGATTAGGGTCATTGGGAAACCTTCAAAAGATGACGGGAGCAATAACGCACTCACTTTTTCAATATCATGCTGGCCCAATTCCCAGGGATATTGTTGCCAACCATACCAGAAAATTCGATCATCATTATTTAATTTTCTACCATAAGCCTGGCATTTTTCGCAATCAGTGCAATAACCCAAAACATGGAATTTCCAGt > 2:93079/2‑251 (MQ=255) agGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGt > 1:419873/1‑251 (MQ=255) ggAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCtt > 1:328676/1‑251 (MQ=255) aGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTc > 2:265304/1‑183 (MQ=255) aGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTc < 1:265304/183‑1 (MQ=255) gAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAgg < 1:243216/251‑1 (MQ=255) aaaCCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAAc < 1:400505/221‑1 (MQ=255) aaaCCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAAc > 2:400505/1‑221 (MQ=255) aaaaGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCCGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAACTCTTTTCTGGCCTTCAAATTTCATACGCCCAACataa > 1:523130/1‑250 (MQ=255) gAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAACTCTTTTCTGGCCTTCAAATTTCATACGCCCAACATACATAAACGTTGCCg > 1:68289/1‑251 (MQ=255) tAACGGACTAACTATTTCAATCTATTGCTGAACCAATTACCAGGGATATTGTTGCAAACCATACCCGACAATTCGATCATCCATATTTAATTTTCTACCATAAGCCTGGCCTTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCTTACGCTTGTGATAAGCCATCAAGCAGGACTTTAACTCTTTTCTGGCATTCAAATTTCATACGCCTAACTTAAATATAAGTTGCCGtttaac > 2:527210/1‑248 (MQ=255) aaCGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAACTCTTTTCTGGCCTTCAAATTTCATACGCCCAACATAAATAAACGTTGCCGTTTCAcc > 1:564423/1‑251 (MQ=255) tttCAATATCTTGCTGGACCAATTCCCAGGGATCTTGTTCCCAACCATACCAGACCATTCGATCATCACTATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCACTACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAACTCTTTTCTGGCCTTCAAATTTCATACGCCCAACATACATAAACGTTGCCGTTTCACCTTCCTCGGGcgcg > 2:282510/1‑251 (MQ=255) tttCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATAACAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAACTCTTTTCTGGCCTTCAAATTTCATACGCCCAACATAACTAAACGTTGCCGTTTCACCTTCCTCGGGcgcg > 2:497993/1‑251 (MQ=255) atatCTTGCTGGACCAAGTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAACTCTTTTCTGGCCTTCAAATTTCATACGCCCAACATAAATAAACGTTGCCGTTTCACCTTCCTCGGGCGCGGGAAt < 1:206278/251‑1 (MQ=255) aTTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACAGTGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAACTCTTTTCTGGCCTTCAAATTTCATACGCCCAACATAAATAAACGTTGCCGTTTCACCTGCCTCGGGCGCGGGAATGACTGAGTCTTTAGtt < 1:521118/251‑1 (MQ=255) gATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGCGCCATCACCCAATACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAACTCTTTTCTGGCCTTc > 1:345554/1‑136 (MQ=255) gATCATCAATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCATGTCTTTAACTCTTTTCGGGCCTTc < 2:345554/136‑1 (MQ=255) caATATTTAATTTTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAACTCTTTTCTGGCCTTCAAATTTCATACGCCCAACATAAATAAACGTTGCCGTTTCACCTTCCTCGGGCGCGGGAATGACTGAGTCTTTAGTTTCGACGGGATTAAAAATAACATTTATCGTCGATTCTGCTACACCt > 1:387844/1‑251 (MQ=255) | AATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCATTTTTCGAAATCGGAGCCATCACCCAATACATGGAGTTTCCAGTTACCTTTCGCTTGTGATAAGCCATCAAGCAGGTCTTTAACTCTTTTCTGGCCTTCAAATTTCATACGCCCAACATAAATAAACGTTGCCGTTTCACCTTCCTCGGGCGCGGGAATGACTGAGTCTTTAGTTTCGACGGGATTAAAAATAACATTTATCGTCGATTCTGCTACACCT > NC_000913/3803211‑3803691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |