| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,304,647 | T→C | I391V (ATT→GTT) | mtr ← | tryptophan:H(+) symporter Mtr |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,304,647 | 0 | T | C | 98.6% | 235.1 / ‑5.6 | 70 | I391V (ATT→GTT) | mtr | tryptophan:H(+) symporter Mtr |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (32/37); total (32/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
GCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCA > NC_000913/3304401‑3304892 | gcgGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAgc < 1:571791/251‑1 (MQ=255) gtggcctacGTTTGTGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGAGAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCTTTGCCGACGCCAATCACCAGAACCAgcg < 2:330245/241‑1 (MQ=255) gCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAatc > 1:361105/1‑251 (MQ=255) tttGTGCTGGCGATGGAGGTTAAGGAATAGTTCTTGGGATAGTGTGTCGTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATATACCGGAGAAGTGAAGCGCATCATGACTGGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGATGATTACGGAAACACCGGCAGTAAATTAAAGCTCGATAAAATATGCTCCAGTGCGTTGACGACGCCAAACACCAGAACCAGCGCAATCATCgg < 2:422505/249‑1 (MQ=255) tGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCGTAACGCGGGATGCCTTATCCGAGCTGGCAACGCTTTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATTTCGGATAATGCACCGCTGATTCCTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCtt < 2:559144/250‑1 (MQ=255) gCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGccc > 1:59366/1‑250 (MQ=255) tGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCAcc > 1:126402/1‑251 (MQ=255) cGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCAcccc > 2:458590/1‑250 (MQ=255) gatggatgTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAg < 1:397681/251‑1 (MQ=255) atggatgTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGa < 1:379605/251‑1 (MQ=255) ggatgTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGACAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGAc < 1:517429/250‑1 (MQ=255) ggttgttTGGATAGTGTGTCTTAACTCGGGAAGCCTTATCCGAGCTGGCAACGCTGTGCTACATAGACCTGATAAGCGAAGCGCATCAGTCATTGGGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCt < 2:361105/250‑1 (MQ=255) agTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCt < 1:246763/251‑1 (MQ=255) tgttgGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGcc > 1:553298/1‑251 (MQ=255) gggATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCATGCCACCCCAGACGCGGAATTTCGGGCTGCCaa > 1:57153/1‑249 (MQ=255) gggATAGTGTGTCTTAACGCGGGAAGCCTTAGCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAg < 2:59366/251‑1 (MQ=255) accgcgGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGc < 2:447968/248‑1 (MQ=255) aaCGCTGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCATCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAAGCATCGGCTTGCCACCCCAGACGCGGAATTACGGGCTGCCAAAGCGTTTACGCGATGCa < 2:21537/251‑1 (MQ=255) gcgGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACgg > 1:124376/1‑251 (MQ=255) cgGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGGTTACGCGATGCACggg > 1:379047/1‑251 (MQ=255) tATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑gc < 2:447650/249‑1 (MQ=255) aTCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCCAAGCGTTTACGCGATGCACGGGCTAACA‑GCGcc > 2:526267/1‑251 (MQ=255) gAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGa > 1:355511/1‑250 (MQ=255) gAGCTCGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGCCGCGGAAATTCGGGCTACCACAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGa > 2:113310/1‑250 (MQ=255) cAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑g > 1:47385/1‑236 (MQ=255) cAACGCTGTCCAACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGAGACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑g < 2:47385/236‑1 (MQ=255) gTCCTAAATAGACCTGATAAGCGAAGTGCATCAGGCATGGTGTAGGCAGAAGAAATGTCGGAGAAGGCACCGCTGATTACTGATACACCGGCCGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAACGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCa < 2:124376/250‑1 (MQ=255) cATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAAGGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTa < 2:126402/251‑1 (MQ=255) aGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGcc < 1:458590/251‑1 (MQ=255) gACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCg > 1:549489/1‑251 (MQ=255) cTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCgg > 2:314695/1‑153 (MQ=255) cTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCgg < 1:314695/153‑1 (MQ=255) gATAAGCGAAGCTCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGACCCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTaaa < 2:163633/251‑1 (MQ=255) gATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTaaa < 1:162662/251‑1 (MQ=255) gATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCAGGCTGCCAAAGCGTTTACGCGCTTCCCGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGAAGCCGCTaa > 2:570884/1‑250 (MQ=255) aTAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAAc < 1:96240/251‑1 (MQ=255) gcgacgcgctccAGGCATTGTGTAGGCAGCAGAAATGTCTGATATGGCACCGCTGATTACTGATACTCCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAACCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGTCGCCCAGATGGTAGCCGCTACACCAGc < 2:567497/240‑1 (MQ=255) cATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTa < 1:96364/251‑1 (MQ=255) aGGCAGCTGAAAGGTCGGTTAAGTCCCCGCTGTTTACTGAGACATCGGCAGTAAATGAACGCGCGATAAAATATGCATCAGTGCGTTGCCGACGCTAATCCGCAGAACCGTCGCAATCATAGGCTTGCCACCCCACGCTCTGAGTTCCGGGCTGCCCAAGCGTTTACGCGATGTCCGTGTTAACA‑GCGCCTGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACATGAATc < 2:311292/251‑1 (MQ=255) cagcagAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGt < 1:194195/251‑1 (MQ=255) cagcagAAATGTCGGATAAGGACCCGCTGATTACTGATACACCGGCAGTAAAGTAAAGCTCGATAAAATATGCACCTGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCCCCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGGAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGt < 2:533538/251‑1 (MQ=255) aaaTGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCggg > 1:337431/1‑250 (MQ=255) gTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGaacaa < 1:115611/251‑1 (MQ=255) cGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAACTTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGATTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGGACAGGAATCCGTTCgagcaaaac > 2:441258/1‑242 (MQ=255) cGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAGATATGAACCAGTGCGTTGCCGCCGCCAAACACCCGAACCAGCGCACTCATCGGCTTCCCACCCCAGACGCGGAATTTCGGGCTGCCAACGCGCTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCAGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCCAACAGGCATCCGTTCGGGaacaac > 1:347686/1‑250 (MQ=255) ggATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTACAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGCATTTCGGGCTGCCAACGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCCGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGaacaac > 1:127600/1‑249 (MQ=255) tAAGGCACCGCTGATTACTGATAAACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGCATTTCGGGCTGCCAAAGCGTTTAAGCGATGCACGGACTAACA‑GCCACGGAACAATTGCCGCCCAAATGGTAGCCGCTAAACCAGCATAAACACAGGCGTACAGGAATCATGTCGGGAACAACAGccc > 2:309523/1‑251 (MQ=255) gatcGCTTATTACTGATACACCGGTAGTAAAGTAACACTCGAGAAAAGATGCACCAGTTCCTTTCCGACGCCAAACACCAGAACCAGCGCAATTATCGGCTTGCCACCCCAGACGCGTACTTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGACCAGATGTTAGCCGCTAAACCAGCAGAACCAAGGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCca < 2:296585/248‑1 (MQ=255) ccGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCcac > 1:3587/1‑250 (MQ=255) tGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTg > 1:79279/1‑251 (MQ=255) gcttactgacactcccacaatAAATTAAAGCTGTATAAAATATGCAGCACTGCGTGGCCCACGCCAAACACCAGAACCTGCGCAAGAATCGGATTGCCCCCCCATCCGCAGAAGTTCGGTCCGCCAAAGCGTTTACGTGATGCACTGGCTAACA‑GCGCCGGAACACTTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACATGAATCCGTTCGGGAACTACAGCCCCCCCACAAcg < 2:441535/229‑2 (MQ=255) tACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAAACAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAAAAGCCCCCCCACCACTGGCGGGGCaa > 2:234582/1‑250 (MQ=255) acacCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCaa > 1:42608/1‑249 (MQ=255) cacCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAAAACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAgg > 1:518047/1‑251 (MQ=255) aTTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGGTGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCg > 1:223048/1‑251 (MQ=255) tAAAGCTCTATAACATATGCTCCGGTGCGTTGCCGACTCCAAACACCAGAGCCAGCGCACTTATCGGCGTGCCACCCCAGACGCGGAATTTCGGGCTGCCACGGCGTTTACGAGATGCACGGG‑TAACAAGCGCCGGGAAAATTGCCGCCCAGATGGTGGCCGCCAAGCCTGCATAACCAATTGCGTACAGGAATCCGTTCGGGAACAACAGCCCCGCCGCAACTGGCGGGGCAAAGGTTAGCAATGCCGt < 2:484818/250‑1 (MQ=255) gCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTc > 1:404317/1‑250 (MQ=255) cctgattaaagatgtcccAGTGCGTTGCCGACGACAAACTTCAGACTCAGCGCATTCTTGTGCTTTCCAACCCAGACGTGGACTTTCGGGCTTCCAAAGCGTGTTCGCGATGCACGGTCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTTGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCACCCACAACTGGCGGGGCAAAGGTCAGCTATGCCGTTTTCaa < 2:13012/235‑1 (MQ=255) aaaaTATGCACCAGTGCGTGGCCGACGCCAAACACCAGAACCCGTTCAAACAGCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATGGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACATCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGcc < 2:369948/251‑1 (MQ=255) gCACCAGTGCGTTGCCTACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGTTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCATCAATGCCGTTTTCAAGCGGCCCACAGcc < 1:567999/251‑1 (MQ=255) aCCAGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCg > 1:355341/1‑250 (MQ=255) aGTGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgtc < 1:526267/251‑1 (MQ=255) tGCGTTGCCGACGCCAAACACCAGAACCAGCGCACTCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCACGCGGCCCACAGCCGAatcgg > 1:355666/1‑250 (MQ=255) tGCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACCATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCCAACTGGAGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgtcgt > 1:81873/1‑251 (MQ=255) gCGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgtcgtc < 1:273160/251‑1 (MQ=255) cGTTGCCGACGCCAAACACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGtcgtcg > 1:140554/1‑251 (MQ=255) cAAACTCCAGAGCCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTGCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGa < 1:524186/251‑1 (MQ=255) aaaCACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGCCGCGGAATTTCGGGCTGCCAAAGCGATTACGCGATGCACGGGCTAACA‑GCGCCGGCACAATTGCCGCCCAGATGGTAGCCGCGAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAAATGGCGGGGCAACAGCCAACAAGGCCGTTTTCAAACCGCCCACAGCCGCGTCGTCGAAACCaaaaaaac > 2:464007/1‑246 (MQ=255) aaCACCAGAACCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATc < 1:566842/251‑1 (MQ=255) cAGAACCAGGGCAAGCATCGGCTTGCCACCCCAGACGCGGAATGTCTGGTTGCCAAAGGCTTTACGCGATGCACGGGCTAACA‑GCGCCGGAATAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAGCTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCTAGTCGTCGAATCCAATCAGATCTGCCa < 2:421621/251‑1 (MQ=255) | GCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACATAGACCTGATAAGCGAAGCGCATCAGGCATTGTGTAGGCAGCAGAAATGTCGGATAAGGCACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACA‑GCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCA > NC_000913/3304401‑3304892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |