| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,127,981 | G→A | P14L (CCC→CTC) | glcD ← | glycolate dehydrogenase, putative FAD‑linked subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,127,981 | 0 | G | A | 98.6% | 216.9 / ‑4.1 | 70 | P14L (CCC→CTC) | glcD | glycolate dehydrogenase, putative FAD‑linked subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (27/42); total (27/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.16e-01 | |||||||||||
GCCACCAGAAAGCCCGGTGCCTGCACCACGGGTCACCACCGGTACACGCAGGCGATGGCAGACAGCCAGAATCGC‑TGTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGGGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGA > NC_000913/3127740‑3128226 | gcCACCAGAAAGCCCGGTGCCTGCACCACGGGTCACCACCGGTACACGCAGGCGATGGCAGACAGCCAGAATCGC‑TGTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGCTGTGCGGTCGACATCGAGTAAAgcgc > 2:347613/1‑251 (MQ=255)gcCACCAGAAAGCCCGGTGCCTGCACCACGGGTCACCACCGGTACACGCAGGCGATGGCAGACAGCCAGAATCGC‑TGTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAgcgc < 1:176564/251‑1 (MQ=255) accacGGGTCACCACCGGTACACGCAGGCGATGGCAGACAGCCAGAATCGC‑TGTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGa < 1:380749/251‑1 (MQ=255) cccGGTACACGCATGCGATGTCAGACAGCCAGAATCGC‑CGTCACCTGTTCCATTTGCTT‑AGTCAGAACAACCAGTAATTGACGCGTGCTATACGCGCTCAACCCGTCACTCTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCGCAAGTCCAGGGACATTCTCACGCAGTGCCATCAGTACCGATGTGCTGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACACGATTCTCATtagtag < 2:23592/250‑1 (MQ=255) accGGTACACGCAGGCGATGGCAGACAGCCAGAATCGC‑TGTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTCAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTCAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGt > 2:486271/1‑249 (MQ=255) ccGGTACACGCAGGCTATGGCAGACAGCCAGAATCGC‑TGTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCATCCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGGGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAgg < 1:77201/251‑1 (MQ=255) ggTACAGGCAGGGGATGGCATACAGCCAGAATCGC‑TGTCACCTGTTCCAGTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGGAAGGAATGATCGCCGCATTGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGGCATCGAGTAAAGCGCCATTAAGACGCGCTTCTTACAAGATGCTCATGAGTAGGCt < 2:62468/251‑1 (MQ=255) gttcacGCATGGGATGGCAAACAGCCAGAATCCCCTG‑CACCCGTTCCCTTTGCCT‑AGGGAAAACAACCAGTTATTGACGCCTGCGATAAGCGCTCAACCCGTTACACCCCTAAGGAATGATCTCCCCATCGGTATGCAGGATCCCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCtt < 2:557166/248‑1 (MQ=255) gTACACGCAGGCGATGGCAGACAGCCAGAATCGC‑TGTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCtt < 1:241376/251‑1 (MQ=255) gCAGGCGCTGGCAGACAGCCAGAATCGC‑TGTCAACTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGAAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGACCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGACGACATCGAGTAACGCGCACTCAAGACGCACTTCGGACAGAATGCCCATGAGCAGGCTTCGCttt > 2:317118/1‑251 (MQ=255) actgtcGATGGCAGAGATCCAGACTCGC‑TCTCACCTGCTCCATTT‑CTTGCGTCAGATCCACCAGTAAGGGACGCGTGCGGTACGCGCTCAACCCGTCACACTCGGAAGGAATTTTCTCCTCATCCGTATGCAGGATCTCAAGTCCAGGGACCGGCTCACTCAGTGCCATCAGTACCGATGGGCGGTCTACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTTGCtct < 2:238657/246‑3 (MQ=255) ggCGCTGGCAGACAGCCAGAATCGC‑TGTCACTTGTTCCATTTGCGT‑AGGCAGAACAACCAGTAATGGACCCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTttgtt < 2:15814/251‑1 (MQ=255) ggCAGACAGCCAGAATCGC‑TGTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTtgttgtgtt < 1:533918/250‑1 (MQ=255) gCAGACAGCCAGAATCGC‑TGTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTgttgtgttgt < 1:354773/251‑1 (MQ=255) aGAATCGC‑TGTCACTTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATCCGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTg < 2:110686/251‑1 (MQ=255) c‑TGTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGAtt > 1:275099/1‑247 (MQ=255) c‑TGTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGAtt < 2:275099/247‑1 (MQ=255) gTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTATGTGGCAGCTGATTTTTgcg > 1:284295/1‑251 (MQ=255) gTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCGCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTg < 1:510825/249‑1 (MQ=255) ccTGTTCCATTTGCTT‑AGGCATAACAACCAGTAATGGACGCGGGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCGTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCgct < 2:564847/251‑1 (MQ=255) gTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCgctgct < 1:359604/251‑1 (MQ=255) gTTCCATGTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCgctgc < 2:477804/250‑1 (MQ=255) ttCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCGTCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCtt > 1:491962/1‑251 (MQ=255) ccattttatt‑AGGCAGAACAACCAGGAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCt < 2:86882/243‑1 (MQ=255) cATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGAGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCtg > 2:466183/1‑251 (MQ=255) tGCTT‑AGGCAGACCAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑a > 2:292177/1‑250 (MQ=255) tGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑a > 1:521859/1‑250 (MQ=255) aGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCACCCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGCCATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCTGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGtt > 2:558779/1‑251 (MQ=255) gAACAACCAGTAATGTACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGTCATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGAGTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTaa < 2:333344/251‑1 (MQ=255) aaacaaacaGTAATGGACGCGTTCGATACGCGCTCACCCCGTCACACTCGTAAGGAATGAACTCCGCATCGGGATGCAGGATCTCAAGTCCAGGGACAGGCTCGCGCAGTGCCATCAGTACCGATGTGCGGGCGACATCGAGTAAAGCGTCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCGTTGTGGTGTTGTGTTGCAGCTGATTTTTGCGCGCTGCTGCTGTG‑AACAGGTATTaa < 2:503731/250‑1 (MQ=255) aacaacCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAg < 1:435794/251‑1 (MQ=255) aacaacCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCAGCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGGGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCATCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAg < 1:210017/251‑1 (MQ=255) caacCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGACTGATCTCCTCATCGGCATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGCGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCATCGCTTTGTTGGGTTGTGTGGCCGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTCTTAAGCg > 1:232306/1‑251 (MQ=255) caacCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCg < 1:230032/251‑1 (MQ=255) aacCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGCCGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGCTTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCgg > 1:68256/1‑251 (MQ=255) acCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCggg > 1:137900/1‑251 (MQ=255) ccAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGc > 1:403010/1‑251 (MQ=255) tAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGTTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTATGCGGGCtttt > 2:509878/1‑251 (MQ=255) gACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCttttcgttt < 1:149223/251‑1 (MQ=255) cGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCttt > 1:243554/1‑249 (MQ=255) aTACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCACGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTAtct > 2:124375/1‑251 (MQ=255) cgcTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTa < 1:537135/251‑1 (MQ=255) cTCAAACCGTCACACTCGTCAGGAATGATCTCCTCATCGGAATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGCGTAGGCCTCGATTTGTTGTGTTTTGTGGCAGCTGATTTTTGAGCGCCGATTCTGTGCAAC‑GTTGTTAAGCGGGCTTTCAGTTTTCGTCTATCACTTTAGc > 2:279497/1‑251 (MQ=255) cccGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCg < 1:285571/251‑1 (MQ=255) ccGTCACACTCGTAAGGAATGTTCTCCTCATCGGTATGCAGGATCTCAAGACCAGGGACATGCTCTCGCAGTGCCATCAGTCCCGATTGGCGGTCGACAGCGAGTAAAGCGCCTTCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGGTGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGTGCTTTTCGTTTTCGTCTAGCTCTTTAGCTACCgg < 2:460534/251‑1 (MQ=255) gTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGGGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑TACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTc > 1:522109/1‑251 (MQ=255) aaTGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTc < 1:509878/251‑1 (MQ=255) tATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGt > 1:77622/1‑251 (MQ=255) cAGGACCTCAAGTCCAGGGGCATGCGCACGCATTGCCATCAGTACCTATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTg < 2:309042/251‑1 (MQ=255) gATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGtt > 1:140918/1‑251 (MQ=255) aTCTCAAGTCCAGGGACATGCTCACGAAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGtt > 1:219291/1‑250 (MQ=255) ccAGGGACATGCTCAAGAAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGATTCGCTTTGTTGTGATGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGAGGGCTTTTCGTTTTCGTCTATCTCTGTAGCGACCGGTCAGACAATTTTTTTTCCAGCTCGGTGACCTTGTCTTGGTTAACTCAATGt > 1:106951/1‑251 (MQ=255) aGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGCCCTTGTCTTGGTTAACTAAATGtt > 1:344387/1‑250 (MQ=255) aGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTa < 1:317118/251‑1 (MQ=255) aGGGACATGCCTACGCAGGGCCATCAGTACCGAAGTTCGGTAGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGTCTTTGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCGATCTCTTTAGCTACCGGTCAGACCATTTTGTTTCCAGCTCTGAGACCTTGATTTGTTGAACTCAATGTTa < 2:522109/251‑1 (MQ=255) catgatcgcGCAGTGCCATTAGTTCCGATGAGCGGTCGACAACGAGTAAAGCGCCATCAAGACGCTCTTCGTTCAAGATGCTCATGAGTAGGCTTCGTTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTg < 2:288107/243‑1 (MQ=255) tCACGCAATGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCACGACGCTCTTCGTACACGATGCTCATGAGTAGGCCTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTAGTCTCTCTCTTTAGCTACCGGTTAGACACTTTTTTTTCCAGCTCTGTGACCTTGTCTAGGTTCACTCAATGTTGACTTGATGt > 2:267924/1‑250 (MQ=255) cGCAGTGCCATCAGTACCGATGTTCGGTCGAAAACGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTGTTCGTTTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACa < 2:262741/251‑1 (MQ=255) tGCCATCAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTaa > 1:31242/1‑223 (MQ=255) tGCCACCAGTACCGATGGGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTaa < 2:31242/223‑1 (MQ=255) gCCATCAGGACCGATGTTCGGTCGACATCGATTAAAGTGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGTTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCGGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCa < 1:327986/251‑1 (MQ=255) catctgttccgatggtcGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCGTCGTACTAGATGCTAATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGTCAGCTGATTTTTGCGCGCTGCTTCTGTT‑AACAGTTATTAAGCGGGTTTTTCGTTTTCGTCTATCTCTTTATCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACCTAATCACt < 2:302006/235‑1 (MQ=255) cAGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTa < 1:510822/250‑1 (MQ=255) aGTACCGATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACACGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGCTTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTTATGTACCATAATCACTTACg > 2:9729/1‑251 (MQ=255) cGATGGGCGGTCGACAACGAGTAAAGCGCCAACAAGACTCTCGTCGTACAAGATGCGCATGAGTAGGCTTTGCTTTGTTGTGTTGTGTGGCAGCTGAGTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAAGTGATGTAACATAATCCCTTACGTGAtg < 2:302182/251‑1 (MQ=255) gATGTGCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGAtgt < 1:421663/251‑1 (MQ=255) gtgCGGTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCg < 1:399054/251‑1 (MQ=255) ggTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGtt < 1:347613/251‑1 (MQ=255) ggTCGACATCGAGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGtt < 1:183033/251‑1 (MQ=255) cATCGAGTAAAGCGCCATCAAGACGCTCTTCGTTCAAGATGCTCATGAGTAGGTTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGa < 2:289634/251‑1 (MQ=255) | GCCACCAGAAAGCCCGGTGCCTGCACCACGGGTCACCACCGGTACACGCAGGCGATGGCAGACAGCCAGAATCGC‑TGTCACCTGTTCCATTTGCTT‑AGGCAGAACAACCAGTAATGGACGCGTGCGATACGCGCTCAACCCGTCACACTCGTAAGGAATGATCTCCTCATCGGTATGCAGGATCTCAAGTCCAGGGACATGCTCACGCAGTGCCATCAGTACCGATGTGCGGTCGACATCGGGTAAAGCGCCATCAAGACGCTCTTCGTACAAGATGCTCATGAGTAGGCTTCGCTTTGTTGTGTTGTGTGGCAGCTGATTTTTGCGCGCTGCTTCTGTG‑AACAGTTATTAAGCGGGCTTTTCGTTTTCGTCTATCTCTTTAGCTACCGGTCAGACCATTTTTTTTCCAGCTCTGTGACCTTGTCTTGGTTAACTCAATGTTAAATTGATGTAACATAATCACTTACGTGATGTGCGTGTTTTGCGA > NC_000913/3127740‑3128226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |