| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,871,153 | T→G | N51T (AAC→ACC) | truD ← | tRNA pseudouridine(13) synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,871,153 | 0 | T | G | 98.2% | 185.3 / NA | 54 | N51T (AAC→ACC) | truD | tRNA pseudouridine(13) synthase |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base G (29/24); total (29/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGAGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCACAGGCAATCCCTTCCCCACGTCCGGTAAATCCCAGTTTTTCCGTAGTAGTGGCTTTCACG > NC_000913/2870918‑2871397 | gTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGAGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGAAGCAGGTTTTGAGGATTCTa > 2:483156/1‑250 (MQ=255) ttACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGGGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCCTGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGTGATTGAAGCCGGTTTTGAGGATTCTacc > 2:459496/1‑249 (MQ=255) ccTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCCTACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGCGCGCATAACCACTATTCC‑GTAACAGCATGTTTGTCTTTTTTCACAGCGCAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑ATTGCATCCTCCACAATCCGGGTATTGCAGCAGGTTTTGatgtttttaacc > 1:348970/1‑238 (MQ=255) ccTTTCAGCGAGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGCAAGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGAGCGCATCACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCAAGCGACGCTGACTTCACGGGCATGAATTTTCAGGACTTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAAcc > 2:222415/1‑249 (MQ=255) ttCAGCGCGCCTAAACGCAGCTCGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATGTCCTTGCCC‑GG‑CACGCGAGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAat > 1:434226/1‑251 (MQ=255) cAGCGCGCCTAAACGCAGCTTGCGCTTGTGCAGCGCATACTCAAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCCGGCATTTCCTTGCAC‑GG‑CACGCGAGCGCCTAACCACTGTTAC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGCATTTCGCC‑AGTGCATCCGACACAAACCGGGAATAGCAGCCGGTTTTGAGGATTATAACCAGActat > 2:373531/1‑251 (MQ=255) gttggcgtttgtgccgcccaacacccAGCCCCTGGCCTCCTTCCAGTTGAAAGGCGCTAAGCTCGGG‑TTTTTCTTGCCCCGG‑CTCGCGAGCCTATACCCCCTTTCCC‑GTAACAGAATTTTTGTTTTTTTCCCCAGCGAATCTGACTTCACGGGCATGAATTTTAAGGATTTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCa < 1:311076/227‑1 (MQ=255) gtgCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGAGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGTATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGc > 1:105411/1‑251 (MQ=255) cATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGAGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCA‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCt > 2:509541/1‑251 (MQ=255) cccAGCCCCTGGCAGCTTTCCAGGTGAAAGGCGCCAAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGAGCGCAAAACCCCGGTCCC‑TTAACATCATGTTTGTTTTTTTGCCCAGCGAAGCTGACTCCACGGGCATGATTTTTCAGGAATTTGGCC‑AGGGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTccac < 1:560313/250‑1 (MQ=255) ccgggcccccTTCCAGTTAAAAGCCGCTCAGATGGGGCATTTCCTTCCCC‑GG‑CACGCGCGCGCATAACCACTTTTCC‑GTACCAGCTTGTTTGTCTTTTTGCCCAGCGAATCTGACTCCCCGGGCATAAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACcaca < 1:225091/243‑1 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGAGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACaa > 1:563521/1‑249 (MQ=255) gCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGAGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCtt > 1:199926/1‑251 (MQ=255) ccTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGAGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTc > 1:154989/1‑251 (MQ=255) ccAGTTGAAAGGCGCTCAGATGGGGCTTTTCCTTCCCC‑GG‑CACGCGAGCGCATACCCACTTTCCC‑GTAACAGCATGTTTTTCTTTTTCCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCgg < 1:509541/250‑1 (MQ=255) ttGAAGGGCGTTCAGATGGGTCATTTCCTGGCCC‑CT‑CCCGCGAGCTCATACCCTGTGTTCC‑GTAACATCTTTTTTGTCTTTTCGCCCAGCAAAGCGGATTGCGCGGACATTAATTTTCGGGATTTTCGCC‑AGTGCTTCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATTCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTg < 1:326487/250‑1 (MQ=255) tggaaaggcgtataGATCGGGCTTTTCCTTGCCC‑GT‑CACGCGAGCGCATAACCTCTGTTCC‑GAAACAGCATGTTTGTTTTTTTGCCCAGCGAAGCTGACTTCACGGGCATAAATTTTCAGGATTTTCGCC‑AGGGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCGCCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTg < 1:373649/237‑1 (MQ=255) aaaGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGAGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCAACCCAAAGTCTTCCGGATTGGCtt > 2:183959/1‑251 (MQ=255) aaGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGAGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCttt > 2:567410/1‑251 (MQ=255) ccggcctttCCCTGCCC‑GGGCACGCGGGCGCATAACC‑CTTTTCCCGTAACAGCTTGTTTGTCTTTTGGCCCAGCGAAGCTGACTTCCCGGGCATGAATTTTCAGAAATTTCGCC‑AGTCCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGt < 1:150929/245‑1 (MQ=255) gggaaTTTCCTTGCCG‑GG‑CACGAGAGCGTATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGAGAAGCTGACTGCACGGGCATGAATTTTGAGGAATTGCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGc < 1:212186/247‑1 (MQ=255) gAGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTa > 1:248505/1‑250 (MQ=255) aaaaacctcgttccc‑GTAACAGCTTGTTTGTTTTTTTGCCCAGCGAAGCTGCCTTAAGGGGTATGAATTTTAAGGAATTCCGCA‑GGGGAATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTgag < 1:68827/238‑1 (MQ=255) aaCCACTGTTCC‑GTAACAGAATGTTTGGCTTTTCGCCCCGCGAAGCTGAATTCACGGGCATAAGTTTTCAGGACTTTCGCC‑CGTGCATCCGCCACAAAACGGGTATTGCAGACGGCTTTGAGGATTATAACCAGAATATGCTCACCTTCACCATCAGGCTCAACGCCCAAATCTTCCACCACCCCAATGTCTTCCGGACTGACTTTCAGACGCCCGGTGCCTGGCGTTTTACCGTGGGGGCAAGTGAGAtt > 2:280207/1‑251 (MQ=255) tttCC‑TTAACAGCATTTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTGAAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCaaa < 1:483156/249‑1 (MQ=255) ggtcccgaaacatcgtttttGTTTTTTTGCCAAGCGAAGCGTACTCCCCGGGCATAAATTTTCAGGATTTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCaa < 1:36760/233‑1 (MQ=255) gTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAAc > 1:393361/1‑251 (MQ=255) gTTCC‑GTAACAGCAGGTTTGTTTTTTGGCCCAGAGAAGCTGACTTCACGGGCATGAATTTACAGAAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCTGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCaa < 1:277854/249‑1 (MQ=255) tacc‑GTAACAGAATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGAAATGCAGACGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGACTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGCATGGCTTTCAGCAGCCCGGGGCCTTACGGTTTACCGCGGAGGGAAGTGAGATTATCACACt > 2:529741/3‑251 (MQ=255) tCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGACGGATTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTACACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCAGTGCCTTGCGGATTACCGTGGAGGTAAGTGAGATTATCAAACTc > 1:339626/1‑251 (MQ=255) gTAACGGCATTTTTGTTTTTTGGCCCAGCGAGGTTGATTTCCCGGCCAGGAATTTTCAGGAATTGCGCC‑GGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAAt < 1:87397/251‑1 (MQ=255) cAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCAGCCACAAAACGGGTATTGCACCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGACTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGCGATTATCAAACTCAATCAtt > 1:534040/1‑251 (MQ=255) cATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCAtttt > 1:113532/1‑250 (MQ=255) ttGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGcc > 1:158978/1‑251 (MQ=255) ttttcGCCCTGCGAAGCTGACTTCCTGGGCATGAATTTTAAGGATTTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTaa < 1:288285/250‑1 (MQ=255) tGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGt > 1:172520/1‑251 (MQ=255) cccAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCt > 2:237533/1‑241 (MQ=255) cccAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTCCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCt < 1:237533/241‑1 (MQ=255) ccAGCGAAGCGGACTTCACGGGAATGAATTTTCAGAAATTGCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAgc < 1:349172/251‑1 (MQ=255) aGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAgcgc > 1:28283/1‑251 (MQ=255) aCTTCCCGGGCATGAATTTTCAGAATTTTCCCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTca < 1:299470/251‑1 (MQ=255) aaagggtcATGAATTTAAAGAAATTGCGCC‑AGTCCACCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCACAg < 2:128205/244‑1 (MQ=255) ccGGGCATGAATTTTCAGGA‑TTTCGCCCAGTCCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCACAGGc < 1:529150/250‑1 (MQ=255) gAATTTTCAGGAATTGCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCACAGGCAATCCCt < 1:183959/250‑1 (MQ=255) taggtaactctccgcggtatccctccACAACACGGGTATTGCAGCCGTTTTTGAGGAGTCTAACCAGAATAGTCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCTCCACAAAGTCTTCCGGATTGGCTTGCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTAGCAAACGCAATCAGTTTGTTGCGTTAATGAGTAGCGTCGCCGGTTCACAGGCATTCCCTTCCCCa < 2:55947/226‑1 (MQ=255) cagtaaTTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCACAGGCAATCCCTTCCCCAc < 1:352646/246‑1 (MQ=255) aTTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATAAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCACAGGCAATCCCTTCCCCACGTCCgg > 2:176490/1‑251 (MQ=255) cc‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCACAGGCAATCCCTTCCCCACGTCCGGTAAATc > 1:480578/1‑251 (MQ=255) gctccATCCCCCACAAATCCGGTATTGCAGCCGGTCGTGAAGATTCTAACCAGAATATGCTCGTCGTCCCCAGCAGGCTCAAAGTCCAAACCTTCCACCGCCACAGAGTCTACCGGATTGGCTTTCAGCAGCACGGTGCCTTTCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCCATCATGTTGTTGCCTTAATACGTATCGCAATCGCTTCACAGGCAATCCCTTCCCCACTTcctggaaacccc < 2:434226/247‑11 (MQ=255) gCATCCGCCACAAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCACAGGCAATCCCTTCCCCACGTCCGGTAAATCCCAg < 1:400268/250‑1 (MQ=255) cacaAAACGGGTATTGCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCACAGGCAATCCCTTCCCCACGTCCGGTAAATCCCAGTTTTTCCgt < 1:15508/251‑1 (MQ=255) gggTATTGCAGCAGGTTTTGAGGATTCTAACCAGACTATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATATTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGCTTATCACACTCAATCATTTTGTTTCCTTAATGAGTAGCGCCACCGCTTCACAGGCACTCCCTTCCCCACGTCCGGTAAATCCCCATTTTTCCGTACTAGTgg > 2:339543/1‑251 (MQ=255) gCAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCACAGGCAATCCCTTCCCCACGTCCGGTAAATCCCAGTTTTTCCGTAGTAGTGGCTTTCAc > 1:499214/1‑251 (MQ=255) cAGCCGGTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCCAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCACAGGCACACCCTTCCCCACGTCCGGACAATCCCGGCTTTTCCGTAGTAGAGGCTTTCACg > 2:553452/1‑251 (MQ=255) | GTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCC‑GG‑CACGCGAGCGCATAACCACTGTTCC‑GTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCATGAATTTTCAGGAATTTCGCC‑AGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCACAGGCAATCCCTTCCCCACGTCCGGTAAATCCCAGTTTTTCCGTAGTAGTGGCTTTCACG > NC_000913/2870918‑2871397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |