| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,587,112 | C→T | A461V (GCA→GTA) | narQ → | sensor histidine kinase NarQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,587,112 | 0 | C | T | 96.1% | 140.3 / NA | 54 | A461V (GCA→GTA) | narQ | sensor histidine kinase NarQ |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base T (20/29); minor base G (1/1); total (23/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
ACTTACGTATCCAGTTGACGTTACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGCACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATGCGCGAACGCGCGGAACGGCTAGGTGGGACGCTGACTTTTTC > NC_000913/2586866‑2587355 | acttacGTATCCAGTTGACGTTACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAAAGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGTACCGCGACTGCCGTATGCCAAACCTGGCaagg > 2:484495/1‑248 (MQ=255) acGTATCCAGTTGACGTTACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGGACT‑GGATg > 1:259489/1‑251 (MQ=255) gTATCCAGTTGACGTTACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATgcg > 1:465923/1‑251 (MQ=255) gTTGACGTTACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGc < 1:480795/251‑1 (MQ=255) tACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTAGCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCa < 1:547962/250‑1 (MQ=255) cGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAatt > 1:197566/1‑251 (MQ=255) tACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGACTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAattatt > 1:205880/1‑251 (MQ=255) ggAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTcgcg > 1:432126/1‑251 (MQ=255) aaCGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCggg > 1:161118/1‑250 (MQ=255) aCGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTg < 2:197566/251‑1 (MQ=255) aCGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCCTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTg < 2:170321/251‑1 (MQ=255) gctcataGTATCATGGCCGTTTGTTACAAGGCTTTGATGGATTCTTAGCGGCAGTGCCTCGAGTCGTTCACTACTGTCCGACTCACGCGGCAGCAGGCGTATCTCCCCGCCGCTTTGAGGGAAATGCTGGATACGTTACAAAATCAAACCTGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCTTTGTACT‑TGATGCGCAAAGTCAGGTTCATTTGTTGCAACTTATTCGCTACGCGCTG‑CTGAATGc < 2:356140/245‑1 (MQ=255) cATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCacg < 1:377314/251‑1 (MQ=255) ccGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCacgccaac > 1:523619/1‑251 (MQ=255) ccGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCacgccaac < 1:26092/251‑1 (MQ=255) gATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCacgccaacgc > 1:554813/1‑251 (MQ=255) tttttCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGATCTTTTGTCTACTTTCCGCCTGACGCTGCAACAGGCGGATCTCCCCTCCGCATTGGGGGAAATGCTGGATACGTTACAAAAACAAACCAGCGCCAAACTGACCCTCCACTGCCGTCTGCCAACACTGGTACC‑GGAGGCGCAAAAGCAGGTGCATTTGGTTCAAATTCTTCGAGAAGCGTGG‑CTGAATGCGATGAAGCacgcccagaccc > 2:38976/1‑244 (MQ=255) agtcattGAATGATTCTTATCGGGAGTTTCGCGACCTGTTGACTTCTTTCCTCCTGTCGTTGCATCAGGCGGATCCCCCCGCCGCATTGAGGTAAATGTTGGATTCGTGACAAAAGCATGCCAGCGCCAAACTGACCCTCTACTGCCGTCTGCCAATCCTGGTACT‑TGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATCCGTGAAGCGGTG‑CTAGATGCGATGAAGCACGCCCACGTCAGCGAAATc < 2:87320/246‑1 (MQ=255) ggCGTTGAATGATTCTTATCGGCAGTTACGCGAGCTGGTGACTACTTGCCGCCGGACGCTGCAGCAGGCGGATCACCCCTCCGCATTGAGGGAAATGCTGGACACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAAGTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCg < 2:205880/251‑1 (MQ=255) gAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTc < 1:161804/250‑1 (MQ=255) aaTGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTc > 1:162528/1‑249 (MQ=255) cagtgtcgcgAGCTGTTGACTACTGTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCTCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGcc < 2:444330/245‑1 (MQ=255) aCGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACg < 1:386329/251‑1 (MQ=255) gTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATcac < 1:79214/250‑1 (MQ=255) tGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCacac < 1:217423/250‑1 (MQ=255) tGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTAGTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCacac < 1:58625/250‑1 (MQ=255) gACTACCTGCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTCAGGGAAATGCTGGATACGTTACAAAATCAATCCAGCGCCAACCTGACCCTCGTCTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTGGCCAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACgg < 2:137162/251‑1 (MQ=255) aagactTTCCGCCTGACTCGGCAGCAGGCGGAACCCCCCGCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAACCTGACCCTCGACTGCCGTCTGCCAACCCGGGGACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGt < 2:162528/248‑1 (MQ=255) cGCTGCAGCAGGCGGATCTCCCCACCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTTATAAc < 2:345953/251‑1 (MQ=255) gcagcaGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACggg < 1:372241/250‑1 (MQ=255) cagcagGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGCATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGAt > 1:342196/1‑251 (MQ=255) gcagGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTg < 1:431084/251‑1 (MQ=255) gcagGCGGATCTCCCCACCGCATTGAGGAAAATGCTGGATACGGGAAAAAAACAAACCAGCGCCAAAATGACCACAGACTGCCGTCTGCCAACCCTGGTACT‑GGGAGCGCCAATGAAGGGGCATTTGTTGCAAATTATTCGCGCAGCG‑TGTCTGAATACGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCATTTGCGTAACCGCGCCGGACGGCACACACCCGGTTTATATCCTTGTTAACGGGATTg > 2:274721/1‑251 (MQ=255) agGCGGATCTCCCCTCCGCATTGAGGAAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGt > 1:150596/1‑251 (MQ=255) gCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGCCCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGtct > 1:185580/1‑249 (MQ=255) ccTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCg < 1:520189/251‑1 (MQ=255) cGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTTCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAg < 2:366132/251‑1 (MQ=255) gCATTGAGGGAAAGTCTGTGTTCGTTACAAAATCAATCCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCTCAAATGCAGTTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCGCCGCGCCGGACGTCAAGCACACGGTGTATATCCGTGATAACGGGATTGTTATCGTTGAACTGAAAGa < 2:520454/251‑1 (MQ=255) gAGGGAAATGCTGGATACGTTTCAAAATCAACCCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTCCT‑TGCTGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGGGAACCGAAAGATccc < 2:554813/250‑1 (MQ=255) aaTGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTc > 1:426342/1‑251 (MQ=255) cTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGAATGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGGTAATATCCGTGATAACGGGATTGGTATCGGTGGACCGacaatacccaaaggacctg > 2:315594/1‑232 (MQ=255) ggATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTAt < 1:257564/250‑1 (MQ=255) ggATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATg < 2:237309/251‑1 (MQ=255) aaaaTCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGa > 1:229605/1‑136 (MQ=255) aaaaGCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGa < 2:229605/136‑1 (MQ=255) agcAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTTCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCACTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGTACCCGAAGGTCATTATGGTCTGAATATCATg < 2:212819/249‑1 (MQ=255) aaCTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATGCGCGAACGCGCGGa > 1:266121/1‑250 (MQ=255) cTGACCCTCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCCGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCAAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACCCGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATGCGCGAACGCGCGGAACg > 2:277789/1‑251 (MQ=255) aCCCGCGACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCAGTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTAGCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATGCGCGAACGCGCGGAACGGc < 1:489800/250‑1 (MQ=255) cacTCGACTGCAGTCGGCCAACACTGGTATG‑GGATGCGGAAATGACGGTGCATTTGTTGCACATTATTCGCGAAGCGGTT‑CAGAATGAGCTGCAGCACGACAACGCCAGCGAAATCGCCGTCCGTTGATACTCCGCGCCGGACGGCAATCACCCGGCTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCAGAAGGTCATTATGGTCTGAATTTCATGCGCGAACGCGCGGAACGGCTa < 2:494402/249‑1 (MQ=255) gACTGCCGTCTGCCAACCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGCTTATATCCGTGATAACGGGATTGGTCTCGGTGACCCGAAAGAACCCGACGGTCATTATGGTCTGAATATCATGCGCGAACGCGCGGAACGGCTAGGTgg > 2:437957/1‑251 (MQ=255) cgggtttGCCAATCCTGG‑ACTTGGATGCGCAAAGTCATGTGCATTTGTTGCAAATGTTTCGCGTAGCGGTG‑CTGAATGCGATGGAGCTCGACAACTCCAGCGAAATCGCCGTCAGTTGCTTCTCCGCGCCGGACGGGAATCACACGGTTTATAACCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAGCCCGAAGGTCATTATGGTCTGAATATCATGCGCGAACGCTCGGAACGGCTAGGTGGGaa < 2:202227/244‑2 (MQ=255) tCTGCCAACCCTGGAACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATGCGCGAACGCGCGGAACGGATAGGAGGGACGCTg > 1:126544/1‑250 (MQ=255) aCCCTGGTACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGATTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATGCGCGAACGCGCGGAACGGCTAGGTGGGACGCTGACTTTTTc > 1:313570/1‑251 (MQ=255) | ACTTACGTATCCAGTTGACGTTACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGCACT‑GGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTG‑CTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATGCGCGAACGCGCGGAACGGCTAGGTGGGACGCTGACTTTTTC > NC_000913/2586866‑2587355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |