| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,791,057 | C→T | G63D (GGT→GAT) | selO ← | protein adenylyltransferase SelO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,791,057 | 0 | C | T | 94.3% | 89.1 / NA | 36 | G63D (GGT→GAT) | selO | protein adenylyltransferase SelO |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (14/19); minor base G (0/2); total (14/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
CGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATACCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTATAGGTTTCTGGCAATTCATCGCGCCAGCGGGTAACAAAAGACAGGGTCATAGATCCTCCTGTTTGATAGTGTAGACGGTTACTCTCGTCTTAAACACCAG > NC_000913/1790813‑1791294 | cgtaggAATGCCCAGATAATGCACCGCCTCACTGGCGAAACTTTCTCGGAACGTCGAACGTAAAACCGCCCGTCCATCACCCATGCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCa < 2:174653/247‑1 (MQ=255) ccAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTcg > 1:142675/1‑251 (MQ=255) cACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTgc < 1:101202/250‑1 (MQ=255) gagaCTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCAtttt > 1:297314/1‑251 (MQ=255) tttCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAAc > 1:99349/1‑251 (MQ=255) ccgtaccgccgAAGGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGcg < 2:259022/242‑1 (MQ=255) cGTATTGTCGAACGTCAAACCGCCCGTCCAACACCCATGCTCGAATAAGGCGGCAGGTCAGCACCGTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTTGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTTCGCTAGTGGTGACATATCAGGCAGTATGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGcga < 2:519848/251‑1 (MQ=255) aCGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATAc < 1:453536/251‑1 (MQ=255) aaaaCCGCCCGTCCATCACCCATTCGCGAGTAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAg < 1:36170/251‑1 (MQ=255) aTCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCATTTGTACGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGATCTGATGACCACTGTAAACCTGCGCCAGTGGTTACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGtt < 2:497300/251‑1 (MQ=255) aTTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATAGCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGtatt < 1:355306/251‑1 (MQ=255) gAATACGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCAAGTTGGCCCGCCCAGACGACGAACTGATGACCACTGTCAACCTGCGCCAGTGGTGAAATATCCGGCTGTAGGGCTTCGCCGCCCCAGACACCTACGCCATTTTTAAACAGCGGCGCTGGa > 2:455814/1‑216 (MQ=255) gAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGACTAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGCCACCTGCGCCATTTTTAAACAGCGACGATGGa < 1:455814/216‑1 (MQ=255) aTAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCaa > 1:10312/1‑250 (MQ=255) aGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCa > 1:441438/1‑211 (MQ=255) aGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCa < 2:441438/211‑1 (MQ=255) ccagcatcgtacAGATGCCATGCCAGTGTAGAGACCTCAGCAAGCAGTTGTTCGCCGAGTAAAATTCCGCGGCCATCCCCCAGTTGGCCCGCCCAGACGCCGAACTGAGGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGGAGGTCTTCGCCGCCCCAGACGCCTGTGTCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCAAAATCCGCCGGGCatt < 2:437715/240‑1 (MQ=255) gCACCTTTCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCatgatt < 1:339308/251‑1 (MQ=255) aCCTTTCAGATGCCATTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTa < 1:27955/251‑1 (MQ=255) tCAGATGCCAGTCCATTGTAGTGTCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAgg < 1:78347/250‑1 (MQ=255) gtcATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACCCCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTAGAgg < 1:196421/249‑1 (MQ=255) gtcATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTATAgg < 1:196423/249‑1 (MQ=255) aGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTATAGGTTTCTGGCAATTc > 1:82687/1‑251 (MQ=255) ttgttCGCCGAGTAAAATGCCGCGCCCATCACCCAGTAGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGGAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCCGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGGAGGGGAAAGTGCTGTATAGGTTTCTGGCAATTCAt > 2:118510/1‑251 (MQ=255) cgacGAGTAAAATGCCGCTCCCATCCCCCAGGTGGCCCGCCCAACCGCCGAACTGATGGCCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTATAGGTTTCTGGCAATTCATcgcg < 2:199157/247‑1 (MQ=255) tGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTATAGGTTTCTGGCAATTCATCGCGCCAGCGGGTAAc > 1:81721/1‑250 (MQ=255) aCCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGt < 2:135353/150‑1 (MQ=255) aCCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGt > 1:135353/1‑150 (MQ=255) aggtGGCCCGCCCAGACGCCGAACTGATGACCCCTGTAAACCTGCGCCAGTGGTGACATAACAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTATAGGTTTCTGGCAATTCATCGCGCCAGCGGGTAACAAAAGACAGGGTCATAGa < 2:10312/248‑1 (MQ=255) cccgcacAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAACTCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTATAGGTTTCTGGCAATTCATCGCGCCAGCGGGTAACAAAAGACAGGGTCATAGAtcctcc > 1:76081/1‑251 (MQ=255) aacgtatgtccccTGTAAACCGTCGCCAGGGGTGGCATTGCAGGCAGTAGGGCTTCTCCGCCCCAGACACCTGCGCCATTTGTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCTTTATTTAAAGGCGTAGGGGAAAGTTCTGTATAGTTTTCTGGCAATTCATCTCGCCAGCGGGTAACAAAAGACAGGGTCATAGATCCTCCTGTTTGATACTGTAg < 2:488334/239‑1 (MQ=255) atgaCCACTGTAAACCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTATAGGTTTCTGGCAATTCATCGCGCCAGCGGGTAACAAAAGACAGGGTCATAGATCCTCCTGTTTGATAGTGTAGACGGt > 1:118193/1‑251 (MQ=255) cccACTGTAATCCTGCGCCAGGGGTGACATATTAGGCAGTAGGGCTTCTCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTATAGGTTTCTGGCAATTCATCGCGCCAGCGTGTAACAAAAGACAGGGTCATAGATCCTCCTTTTTGATAGTGTAGACGGtttc < 2:374898/250‑3 (MQ=255) tGTAAACCTGCGCCCGTGGTGAGATATCAGGCAGTAGGGCTTCGCCGCACCAGACACCTGCGCCATTTTTAAACAGCGACGATGGACTACTCAGCGAGTTAGCCAGTTCGGTATTATGACAAATCAGCCGGGCATTATTTAAAGGAGTAGGGGAAAGTGCTGTATAGGTTTCTGGCACTTCATCGCGCCAGCGGGTAACAAAAGAAAGGGTCATAGCTCCTCCTGTTTGAGAGAGTAGACGGTTACTCTCg > 2:233855/1‑251 (MQ=255) aaaCCTGCGCCAGTGGTGACATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTATAGGTTTCTGGCAATTCATCGCGCCAGCGGGTAACAAAAGACAGGGTCATAGATCCTCCTGTTTGATAGTGTAGACGGTTACTCTCGTCt > 1:303287/1‑251 (MQ=255) cAGTGGGGAAATATCAGGCAGTAGGGCTTCGCCGCCCCAGACACCAGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTATAGGTTTCTGGCAATTCATCGCGCCAGCGGGTAACAAAAGACAGGGTCATAGATCCTCCTGTTTGATAGTGTAGACGGTTACTCTCGTCTTAAACACCAg < 2:81721/251‑1 (MQ=255) | CGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCAGTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGTGACATACCAGGCAGTAGGGCTTCGCCGCCCCAGACACCTGCGCCATTTTTAAACAGCGACGATGGAATACTCAGCGTGTTAGCCAGTTCGGTATTATGCCAAATCAGCCGGGCATTATTTAAAGGCGTAGGGGAAAGTGCTGTATAGGTTTCTGGCAATTCATCGCGCCAGCGGGTAACAAAAGACAGGGTCATAGATCCTCCTGTTTGATAGTGTAGACGGTTACTCTCGTCTTAAACACCAG > NC_000913/1790813‑1791294 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |