Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,091,173 IS5 (–) +4 bp coding (1114‑1117/2424 nt) pgaA ← partially deacetylated poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export outer membrane porin

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 273955 =NA (NA)35 (0.690) 32/484 0.5 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 1091176 0 (0.000)coding (1114/2424 nt) pgaA partially deacetylated poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export outer membrane porin
* ? NC_000913 = 275149NA (NA)33 (0.650) 32/484 0.5 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 1091173 = 0 (0.000)coding (1117/2424 nt) pgaA partially deacetylated poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export outer membrane porin

ACGAGGCCAACCGCGGGCTTGTAACACACTCGCGTAATCAATGCGCAGTCCCTGATTTCCTGGTGCGTTATAAGCAAGCTCTCTGGCTGTCATTTCAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCTGATGATCTTTGAGATAAGCCGATGCAACCCAATATTGCCCCCAGGGCGGAATAATTTGCCCCGTCTTTTTTAATCGCTGATAGTGAGAAATAACGTCTTTATAACGATC  >  NC_000913/1090934‑1091416
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                   
aCGAGGTCACCCGCGGGCTTGTAACACACTCGCGTAATCAATGCGCAGTCCCTGATTTCCTGGTGCGTTATAAGCAAGCGCTCTGGCTGTCATTTCAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCAGTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGTCAGTTAGggaaggt                                                                                                                                                                                                                                           >  2:362527‑M2/1‑243 (MQ=255)
         aggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAAtttt                                                                                                                                                                                                                                 >  1:365265‑M2/231‑251 (MQ=255)
           gtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgtctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCa                                                                                                                                                                                                                               <  1:23899‑M2/23‑1 (MQ=255)
               ccgtccattgccagctttggggtaaaacggctcgatggcttccaccctgttgtgccatggcagaatcttgtccatgcgggacaagaaaatcgcttttctggtctgacgtcgcttactgctgaactctctgtcggcgaaggtaagttgatgcctcatgatgaaccctgttctatggctccagatgacaaacatgatcgcatatcagggtcttgtgcgcaccttccTTAGCGCGCCCGGATAATTTTCCctct                                                                                                                                                                                                                           <  2:558523‑M2/27‑1 (MQ=255)
                 ggccattaccagcctgggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatcgcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTcc                                                                                                                                                                                                                         <  1:317727‑M2/29‑1 (MQ=255)
                                      aaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATcc                                                                                                                                                                                                    <  1:40550‑M2/50‑1 (MQ=255)
                                       aaTGCGCAGTCCCTGATTTCCTGGTGCGTTATAAGCAAGCTCTCTGGCTGTCATTTAAGACTGAGGAAGATCATTACTATATTTTTCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGACGAATTAAGGGTGTGTTGGGTGCAAGTTAGggcaggagcgaatacgcgggggaattcttctcgtctgactcagacct                                                                                                                                                                                                   <  2:142207‑M2/251‑48 (MQ=255)
                                                               gtgttgtcatggccgaatctgctatatgcgggacaagaaaatctcttttctggtctgacggctcttactgctgcattcactgtcggcgaaggtaagttgatgtctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATcc                                                                                                                                                                            <  2:307429‑M2/74‑1 (MQ=255)
                                                                 cGTTATAAGCAAGCTCTCTGGCTGTCATTTCAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatt                                                                                                                                                                         >  1:379835‑M2/1‑178 (MQ=255)
                                                                  gTTATAAGCAAGCTCTCTGGCTGTCATTTCAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt                                                                                                                                                                        <  2:82452‑M2/251‑75 (MQ=255)
                                                                       atggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATg                                                                                                                                                                   <  1:489751‑M2/83‑1 (MQ=255)
                                                                       aagcaagcTCTCTGGCTGTCATTTCAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggggcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                                                                                                                                                                   <  1:325601‑M2/251‑80 (MQ=255)
                                                                                ctctGGCTGTCATTTCAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGAATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactaagtcaattcatttcttcatgtttgagccgtttttttctcccgtaaat                                                                                                                                                          <  2:12072‑M2/251‑89 (MQ=255)
                                                                                       catgcgggacaagaaaagcgctgttctggtctgacggcgcttactgctgaattccctgtcggcgaaggtaagttgatgactcacgatgaaccctgttctagggctccagatgacaaacatgatctcagatcagggtcttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGTAGGCTGTAAAAGACATCCGCAAGTTCTTCATCGGATAAATCCGGGGAAATGGTCTCCTTGTGATaaa                                                                                                                                                   <  2:218196‑M2/99‑1 (MQ=255)
                                                                                        atgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTtgtg                                                                                                                                                        <  1:10098‑M2/94‑1 (MQ=255)
                                                                                        atgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTATTCATCGGTTAAATCCGGGGCAATGGTCTCCTtgtg                                                                                                                                                        >  2:10098‑M2/152‑245 (MQ=255)
                                                                                                       ggAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagac                                                                                                                                   >  1:182028‑M2/1‑140 (MQ=255)
                                                                                                             tttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACtg                                                                                                                             >  1:550467‑M2/131‑251 (MQ=255)
                                                                                                             tCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGACGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttt                                                                                                                             <  2:256470‑M2/251‑118 (MQ=255)
                                                                                                              cATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct                                                                                                                            <  1:181368‑M2/251‑119 (MQ=255)
                                                                                                               tctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCTTAATTGCCtgtg                                                                                                                           >  2:386957‑M2/129‑251 (MQ=255)
                                                                                                               aTTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt                                                                                                                           <  1:483715‑M2/251‑120 (MQ=255)
                                                                                                                   caatatttTGCTACGGTTGAGAGAAACGAATGCCCCTGGAACCAGGTATCATTCGGGATGCTCGTAGGCGAGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggcttactcagtcatttcctttcttcctgtttgagccgattttttctcccgtacatgcctttaatcagcctatttagacctgttcttcgcc                                                                                                                       <  2:152478‑M2/249‑124 (MQ=255)
                                                                                                                     ctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAg                                                                                                                                                                                               >  2:149304‑M2/123‑177 (MQ=255)
                                                                                                                     ctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAg                                                                                                                                                                                               <  1:149304‑M2/55‑1 (MQ=255)
                                                                                                                        ttttGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcatatttagaccgtttcttcgccatat                                                                                                                   <  1:284963‑M2/250‑128 (MQ=255)
                                                                                                                                tactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTGCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCtgatg                                                                                                           <  1:260833‑M2/139‑1 (MQ=255)
                                                                                                                                  gTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga                                                                                                                                                   <  1:333620‑M2/208‑96 (MQ=255)
                                                                                                                                  gTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtactaataagcggggaaatgcttctcggccgactcagtcatttcatttcttcatgtttgagccgattttttcccccgtaaatgccttga                                                                                                                                                   >  2:333620‑M2/1‑113 (MQ=255)
                                                                                                                                  ctgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCTGATGATc                                                                                                        >  1:468518‑M2/110‑251 (MQ=255)
                                                                                                                                    gcggaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatcgcatatcagggacttgttcgcaccttccTTAgcg                                                                                                                                                                                                                                                <  2:188219‑M2/6‑1 (MQ=255)
                                                                                                                                      gaacaaacgcaTGCCCCGGTAACCAGGTATCAGTCTGGTTTCTCGTAGGTGGGACCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGTTATGTTGGGTGAAAGTTAGggaaggttcgaataagcggggaaaatcttctctgctgactcagtcatttcatttcttcatgtttgagccgattttttctcccttaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca                                                                                                    >  2:498386‑M2/5‑109 (MQ=255)
                                                                                                                                         gaAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttcgcgtctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt                                                                                                 >  1:321139‑M2/1‑106 (MQ=255)
                                                                                                                                         gaAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGAAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgacttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt                                                                                                 <  1:39000‑M2/251‑146 (MQ=255)
                                                                                                                                           tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggatccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCCCAAGTTCTTCATCGGATACATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCTGATGCTCTTTGAGAt                                                                                                >  1:521668‑M2/101‑250 (MQ=255)
                                                                                                                                            cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCTGATGATCTTTGAGATa                                                                                               <  1:322433‑M2/151‑1 (MQ=255)
                                                                                                                                              ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgctccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTaaaa                                                                                                                                                                                                           <  2:369387‑M2/43‑1 (MQ=255)
                                                                                                                                              ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTaaaa                                                                                                                                                                                                           >  1:369387‑M2/98‑140 (MQ=255)
                                                                                                                                                gacggcgaaggtaagttgatgactcatgatgaaccctgttctatggctcaagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAACAGAGATCCGCAAGTTCGTCATCGGATAAATCCGGGGCCATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCTGATGATATTTGAGATTAGCCg                                                                                          >  2:491452‑M2/96‑251 (MQ=255)
                                                                                                                                                            ccAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccc                                                                              <  2:189815‑M2/251‑165 (MQ=255)
                                                                                                                                                            ccAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggcggactcagtcatttcatttcttcatgtttgcgccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccc                                                                              <  2:146575‑M2/251‑165 (MQ=255)
                                                                                                                                                              aGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaattccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccact                                                                            >  1:368091‑M2/1‑85 (MQ=255)
                                                                                                                                                              aGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccacg                                                                            >  1:368086‑M2/1‑85 (MQ=255)
                                                                                                                                                                  aTCATTCTGGATGCTCGTAGGCGGGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGTTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgac                                                                         >  2:566147‑M2/1‑81 (MQ=255)
                                                                                                                                                                        tatgatgaaccctgttctatggctacagatgtcaaacatttattcatatcagggacttgttcgcaccttccGTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCTGTGCATTGGTCTACTTGTGATAAAAGAGCTCGGTCATTAGTGACTGTTCTTTGTTCGGCTGATGATCGTTGAGATAAGCCGATGCATCCCAATATTTCCCCCAg                                                                   <  2:500400‑M2/179‑1 (MQ=255)
                                                                                                                                                                              gCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtc                                                            <  1:171443‑M2/251‑183 (MQ=255)
                                                                                                                                                                                      ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCACGGTCATTATTGACTGTGCTTTTTTCGGCTGATGATCTTTGAGATAAGCCGATGCAACCCAATATTGCCCCCCGGGCGGAATAATTTGc                                                    >  1:411694‑M2/58‑251 (MQ=255)
                                                                                                                                                                                          gctcataAACCGGAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTTGggaaggtgcgaagaagcggtgaaagtcttctcggctgactcagtcatttcatctcttcatgtttgagcctattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggtgttatccccagttggtagtgagatctctcccactgacgtatcatttggtccgcccgaaacag                                                >  2:467206‑M2/4‑57 (MQ=255)
                                                                                                                                                                                             gctccagatgaaaaacatgatctcatatcagggtcttgttcgcaccttccTTAGCGCGCCCGGATAATTGTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCTGATGATCTTTGAGATAAGCCGATGCAACCCAATATTGCCCCCAGGGCGGAATAATTTGCCCCGTCt                                             <  1:465662‑M2/201‑1 (MQ=255)
                                                                                                                                                                                                tAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattctcctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttgg                                           >  1:53273‑M2/1‑51 (MQ=255)
                                                                                                                                                                                                   ccGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgtgatctctcccactgacgtatcatttggtccgcccgaaacagtttggcc                                         <  2:171742‑M2/249‑202 (MQ=255)
                                                                                                                                                                                                         aaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCTGATGATCTTTGAGATAAGCCGATGCAACCCAATATTGCCCCCAGGGCGGAATAATTTGCCCCGTCTTTTTTAATCGCt                                 >  1:128716‑M2/39‑251 (MQ=255)
                                                                                                                                                                                                             ggcggcGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataac                             >  2:78866‑M2/1‑38 (MQ=255)
                                                                                                                                                                                                              gcggcgAAGTATTAATGGTAGGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataaca                            >  2:325601‑M2/1‑37 (MQ=255)
                                                                                                                                                                                                                  cgAAGTATTAATGGTATGTTGGGTGCCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgcttttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgcgatatctcccactgacgtatcatttggtccgaccgaaccaggttggccagcgagaataacatcgc                        <  2:380759‑M2/251‑219 (MQ=255)
                                                                                                                                                                                                                    caaatcagggactggttcgaaccttccTTAGCGCGCCCGGATAATTTTCCCTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAAGCCGGGGAAATGGTCTCCTTGTGATAAAAGAGCTCGGGCATTATTGACTGTGCTTTTTTCGGCTGATGATCTTTGAGATAAGCCGATGCAACCCAATATTGCCCCCAGGGCGGAATAATTTGCCCCGTCTTTTTTAATCGCTGATAGTga                         <  2:315135‑M2/221‑1 (MQ=255)
                                                                                                                                                                                                                       atcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCg                                                                                                                  >  1:246239‑M2/25‑156 (MQ=255)
                                                                                                                                                                                                                       atcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTAGTGACTGTGCTGTTTTCg                                                                                                                  <  2:246239‑M2/132‑1 (MQ=255)
                                                                                                                                                                                                                            ggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCAt                                                                                                                                                                                       >  1:143389‑M2/20‑82 (MQ=255)
                                                                                                                                                                                                                            ggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCAt                                                                                                                                                                                       <  2:143389‑M2/63‑1 (MQ=255)
                                                                                                                                                                                                                                 aTGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtt         <  1:349878‑M2/251‑234 (MQ=255)
                                                                                                                                                                                                                                   gTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcgtctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcattt                                                                >  2:401333‑M2/1‑16 (MQ=255)
                                                                                                                                                                                                                                   gTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcattt                                                                <  1:401333‑M2/194‑179 (MQ=255)
                                                                                                                                                                                                                                     tGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttc     <  1:148550‑M2/251‑238 (MQ=255)
                                                                                                                                                                                                                                      gcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCTGATGATCTTTGAGATAAGCCGATGCAACCCAATATTGCCCCCAGGGCGGAATAATTTGCCCCGTCTTTTTTAATCGCTGATAGTGAGAAATAACGTCTTTATAACGa    <  1:386957‑M2/242‑1 (MQ=255)
                                                                                                                                                                                                                                       ggTGACAGTTAGggaaggtgcgaataagcggggacattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttc     <  1:329717‑M2/249‑238 (MQ=255)
                                                                                                                                                                                                                                       caccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCTGATGATCTTTGAGATAAGCCGATGCAACCCAATATTGCCCCCAGGGCGGAATAATTTGCCCCGTCTTTTTTAATCGCTGATAGTGAGAAATAACGTCTTTATAACGAt   >  1:289447‑M2/9‑251 (MQ=255)
                                                                                                                                                                                                                                         tGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttcagc  <  1:137314‑M2/250‑241 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                   
ACGAGGCCAACCGCGGGCTTGTAACACACTCGCGTAATCAATGCGCAGTCCCTGATTTCCTGGTGCGTTATAAGCAAGCTCTCTGGCTGTCATTTCAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCTGATGATCTTTGAGATAAGCCGATGCAACCCAATATTGCCCCCAGGGCGGAATAATTTGCCCCGTCTTTTTTAATCGCTGATAGTGAGAAATAACGTCTTTATAACGATC  >  NC_000913/1090934‑1091416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.