| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,938,441 | Δ1 bp | coding (215/993 nt) | rbsR → | DNA‑binding transcriptional dual regulator RbsR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,938,441 | 0 | C | . | 96.7% | 255.3 / 1.2 | 62 | coding (215/993 nt) | rbsR | DNA‑binding transcriptional dual regulator RbsR |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base . (33/26); total (34/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGAC > NC_000913/3938198‑3938685 | aCGCATTTTTAGAAAGGCAGAGGTGACGCTTGGATACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTAtt < 2:263447/251‑1 (MQ=255) aTTTTTAGACAGGCAGCGGTGACGCTTGGCTACAATGAAAGATGTTGTCCGCCTGGCGGGCGGTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCCAAGTTGAAGAGGCGATTAAAGAACTCAATTACGATCACTCAGCTCTGGCGCGGAGCCTCAAACACAATCAAACACAAACCATTTGCATTTTGA‑TCACTGCCAGTACCACTC‑TTTCTATTc > 2:31927/1‑248 (MQ=255) tAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCGGTACCAATC‑TTTCTATTCAGAACTg < 1:195977/250‑1 (MQ=255) ttGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTAACTCAACAGTTTCTCACGTTATCAATAAAGACCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCACTCAACAACATACCATTGGCATGTTGA‑TCACTGCCAGAACCAATC‑TTTCTATTCAGAACTGGTGCATGGCGTTGAACGctgc > 1:537013/1‑248 (MQ=255) ggtatACAATGAAAGATGTTGCCCGCCTGGCGGGCGGTTCTACCTCAACAGTTTCTCACTTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACAGACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAgct < 2:461333/247‑1 (MQ=255) aCAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCACAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAgctgct < 2:183335/249‑1 (MQ=255) tGCCCGCCTGTCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCCGTGAAGAGATTATAGCCAAAGTTGAAGCGGCGACTAAAGAACTCCATTACGCTCCCTCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGACTGTTGAGTC‑CTGCCAGTACCCA‑ACTTACTATTCAGATCTGCTGCGAGGCGTTGAACGCCACTACTTCTAACGCCGTtata > 2:216100/1‑250 (MQ=255) gCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCAGGCGCGTAGCCTCCAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTTCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCg > 2:349447/1‑251 (MQ=255) cgggcgTTACTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCttt > 2:468071/1‑251 (MQ=255) gTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCCCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAAt > 1:474967/1‑251 (MQ=255) cAACAGTTTATCACGTTATCAAAAAAGATCTCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAATCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCGAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAggtg < 2:413491/251‑3 (MQ=255) tttCTCACGTTATCAATAAAGATCGCTTAGTCAGTGACACGATTACCGCCAAAGTTGAAGCGTCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAACCGCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGCACCAATC‑TTTCTATTCAGAACTAGTGCGTGGCGTTGACCACAGCTGCTTCGAAAGCGGATATAGTCTCGTCCTGTGCACTACCGAAGGC‑AATGaa > 1:491402/1‑250 (MQ=255) tcccactataacAATAAAGATCGTATCGTCAGTGAAGTGATGTCCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACTTACCATTGGCATGTTGA‑TCACTGCCAGTCCCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACa < 2:141169/239‑1 (MQ=255) cACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCgg < 1:390420/251‑1 (MQ=255) cGTTCTCAATAAAGTTCGCTGCGGCGGTGAGGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCCCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGACCGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGAt < 2:162661/251‑1 (MQ=255) aTCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACCGCGGATGAAt > 2:365501/1‑251 (MQ=255) aaGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATc > 1:315016/1‑251 (MQ=255) gATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GCTGAACAGCGGATGAATCGCAATCTg > 1:142866/1‑251 (MQ=255) aTCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACACAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTAGCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGGTGAACGCAGCTGCTTCGCACGCGGTTATAGTATCGTCATTTGCAATACCGAAGGCTGA‑GACCAGCGGCTTAATCGGAATCTgg > 2:130035/1‑251 (MQ=255) gtttctccaatGAAGCGAGTACCGCCAAAGTTGAAGCGGCGATTAAATACCTCAAGTACGCGACATCAGCTCTGGCGCGGAGCCTCAAACCCAATCAAACACATACCATTGGCATGTTGA‑TCTCTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGAGGAATCGCATTCTGGaaa < 2:111751/241‑1 (MQ=255) gCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGAGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGaa > 1:43857/1‑250 (MQ=255) tgggaaGTGAAGCGATGACCGAAAAAGGTGAAGCGGCGATGAAAGAACTCAATTACGCGCAATCAGCTCTGGCGCGTAGCCCCAAACTCAATCAAACACATTCCATTGGCATTTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACg < 2:567917/245‑1 (MQ=255) tCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAAACAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAAc < 1:14783/249‑1 (MQ=255) gTCAGTGAAGCGATTACCGCCAAAGTTCAAGCGGCGATTAAAGACCTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCACTCAAACACATACCATTGGCATGTTGC‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGCACGCGGTTATAATCTCGTCCCTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGACACgatg > 1:506524/1‑248 (MQ=255) ggAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCGTTGGCGCGTATCCTCAAACTCAATCAAACCCATACCATGGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCa < 2:128371/250‑1 (MQ=255) aGCGATTACCGACAAAGGTGAAGCGGAGATTAAAGAACTTAATTACGCGCCATCAGCTCTGGCGCGTAGCCGCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGACGGC‑GATGAACAGCGGATGAATCGAAATCTTGAAAGGCttgagcaaa > 2:100164/1‑242 (MQ=255) cccGCCAAAGATGAATGGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCGGGCCAGTAGCCTCAAACTCAATCAATCACACACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCGTTGCAATACCGAAGGC‑GATGAACCGCGGATGAATCGCAATCTTGAAACGCTGATGCAAAAACGCGtt < 2:243475/250‑1 (MQ=255) cccAAATTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATTCCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGGCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGAt < 1:529299/250‑1 (MQ=255) aaaGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGc > 1:94079/1‑251 (MQ=255) aaaGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTACTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACAGAAGGC‑GATGAACAGCGGTTGAATCCCAATCTGGAAACGATGATGCAAAAACGCGTTGATggg > 2:309209/1‑250 (MQ=255) gTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGAGTAGCCTCAAACTCAATCACTCACCTCCCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGCACGCAGCTGCATCGCACGCGGTTATAGTCTCGTCCTGTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAAAGCTTATACAAGACCGCGTTGTTGGATTg > 2:5407/1‑251 (MQ=255) ggcgATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACt < 1:318781/251‑1 (MQ=255) gATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACtgtg > 1:310222/1‑251 (MQ=255) gaaaGAACCCATTGACGCTCCATCATCTCTGGCGCGTATCCTAAATCTCAATCAAACACATACCATTGGCATGTTGA‑TCACGTCCAGTACCAATC‑TTTCTATGCAGAACGGGTTCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGGTATAGTCTCGTCCTTGGCAATACCGAAGGC‑GATGAACAGCGTATGAATCGCATGCGGGAAACGCTGAGGCAAAAACGCGTTGTTGGCTTGCTGTTACTGTGCa < 2:319532/249‑1 (MQ=255) aagatctaaaTTCCGCGCCTTCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACTCATACCATTTGCATGTTGA‑TCCCTGCCAGTACCAATC‑TTTCTATTCAGAACTGTTGCGTGGCGTTGAACTCTGCTGCGTCGACCGCGGTTATAGTCTCGTCCTTTGCAATACCTAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTTCACCg < 2:304973/243‑1 (MQ=255) aaGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATAcc > 2:488755/1‑169 (MQ=255) aaGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATAcc < 1:488755/169‑1 (MQ=255) ccTCACTTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGCCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCTCAATCTGGAAACGCTGATGCCAAAACGCGTTGATGGCTTACTGTTACTGTGCACCGAAAc > 2:14402/2‑251 (MQ=255) aTTACGCGCCATCAGCTCTGGCGCTTAGCCTCAAACTCAATCAAACCCATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATc < 2:14884/251‑1 (MQ=255) aCGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATc > 2:335929/1‑182 (MQ=255) aCGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATc < 1:335929/182‑1 (MQ=255) cgcgCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGAt > 1:361512/1‑216 (MQ=255) cgcgCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGCCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGAt < 2:361512/216‑1 (MQ=255) gcgcCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCACTCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCt > 1:522890/1‑251 (MQ=255) gcactattcgCTCTGGCGCGTAGCCCCAACCTCACTCAAATACATACCATTGGCATGTTGA‑TCACCTCTAGTACCAA‑CATATCTATTATGAACTGGTGCGTGGCGGTGAACGCAGCCGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCTATCCCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGTAAACGCGGATGCCAAAACGTGTTGATGGTGTGCTGTTACTGTGTACCGAAACGCATCAACCt < 2:156534/242‑1 (MQ=255) cgcCATCAGCTCTGTCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAACGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGATACTGTGCACCGAAACGCATCAACCtt > 2:395882/1‑251 (MQ=255) cATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTcgc < 1:365501/251‑1 (MQ=255) aTCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGC‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTcgcg > 2:1106/1‑251 (MQ=255) gcgTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGcc > 2:483103/1‑250 (MQ=255) aGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGTAATCATGCAACg < 1:349447/250‑1 (MQ=255) caaACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGGGCACCGAAACGCATCAACCTTCGCGTGAAATAATGCAACGTTATCCGACAGTGccc > 2:503178/1‑250 (MQ=255) acacAAACCAGTGGCATTTTGA‑TCCCTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACt < 2:503919/251‑1 (MQ=255) caTACCATTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACtgtg > 1:120221/1‑251 (MQ=255) aCCATTGGCATTTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGtgatg < 1:229457/251‑1 (MQ=255) aTTGGCATGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGAGCCTACTGtgatgctg > 2:403195/1‑248 (MQ=255) cATGTTGA‑TCACTGCCTGTACCAA‑CCTTTCTATGCAGAACTGGTGCGGGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCATCGTTATCCGACAGTGCCTACTGTGATGATGGACTg < 1:301916/251‑1 (MQ=255) tGTTGA‑TCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTggg > 1:507387/1‑251 (MQ=255) cACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGc > 1:396856/1‑223 (MQ=255) aCTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGCCAGTGCCTACTGTGATGATGGACTGGGCTCCGTTc > 1:559456/1‑251 (MQ=255) aCTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTc > 1:549654/1‑251 (MQ=255) gCCAGTACCAATC‑GTTCTAGTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGAt < 2:94079/251‑1 (MQ=255) ccAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGGGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGAc > 1:339480/1‑250 (MQ=255) | ACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGA‑TCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGC‑GATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGAC > NC_000913/3938198‑3938685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |