| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,555,047 | 2 bp→TG | coding (1963‑1964/2706 nt) | malT → | DNA‑binding transcriptional activator MalT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,555,047 | 0 | G | T | 84.6% | 107.2 / ‑2.2 | 53 | V655C (GTC→TGC) | malT | DNA‑binding transcriptional activator MalT |
| Reads supporting (aligned to +/- strand): ref base G (2/6); new base T (22/22); total (24/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | NC_000913 | 3,555,048 | 0 | T | G | 92.3% | 136.2 / ‑1.6 | 53 | V655C (GTC→TGC) | malT | DNA‑binding transcriptional activator MalT |
| Reads supporting (aligned to +/- strand): ref base T (1/3); new base G (23/25); total (24/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTGCGCAGCTGTTATGGGCCTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAAGTCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAACCTGTTGCTGCTTAA > NC_000913/3554810‑3555288 || ggggcgtagttgtgaggggCCTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTTGTGTCGGCTTATCCGCCACAGCATCAGCTTGAGGGCCTGGCAATGTTGATGCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAAGGCCGGGTGATTTa < 2:662366/235‑1 (MQ=255) gTTATGGGCCTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAAt < 1:311328/249‑1 (MQ=255) gggCCTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCgg < 1:483007/250‑1 (MQ=255) ggggtcgGCTGGACGAAGCCGATGCGTGGGCGCGTAGCGGGATTGAGGTCTTTGCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTTATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATa < 2:189927/244‑1 (MQ=255) ggcttgaggAAGCTGAAGCGTGGGGGCGTAGCGGGATTGAAGTCTTGTCGTATTAGCAGCCACAGCAACAGCTTCAGTGCCTGTCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGTCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAgccgcc < 2:603388/243‑1 (MQ=255) gAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGtt < 1:524190/251‑1 (MQ=255) cGGCGCGTAGCGGGATGGAAGTCTTTTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGCCCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCa < 1:247411/250‑1 (MQ=255) tAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCt > 1:457226/1‑250 (MQ=255) ggATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGCTTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGAACTCTCACGCCAACAAAGGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCTCCACTGC‑CAACTGGTTACGTAATACGGCTAAAcc > 2:180443/1‑250 (MQ=255) gATTGAAGTCGTGTCGGTTTATCAGCCCCGGCACCTGCTTCAGGGCCAGGCAATGTGGATTAAAGGATGGCTGGCCCGTGTGGATTTAGATAACGCCCGTTGCCAGCTGAACCGTCGGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATTCCGGGTGAGTTTCGGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCag < 2:509981/251‑1 (MQ=255) gaaggtttttctctttATCACCAACAGTAATAGCTTCAGTGCCTTGCAATGTTGATTCAATTCTCGCTGGCCCGTGGTGATCTAGATAACTCCCGTAGCCACCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGt < 1:275753/236‑1 (MQ=255) cgtcTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGGAAATATCACAGCGACTGGATCTCTAACGCCAACAAAGTCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGaacaac < 1:219228/251‑1 (MQ=255) cTTATAAGCCAGAGCAACAGCTTCAGAGCATGGCAATGTTGATTCAATGCTCACTGGACAGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGCAAACCTGCTGGGACATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTAATGGCAACTGACAGGCGACAAAGCCGCCGATGCACAA‑TGGTTGCGTCATCAGGCTAAACCACAGTTAGCGacaacaca > 2:436795/1‑243 (MQ=255) cTTATAAGCCACAGCAACAGCATCAGTGTCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACAGGTTCTCTAACGACAACAAATGCCGGGTGATTTACGGGCAGATGACCGGAGATAAACCCGCCGCTGC‑CCACTGGTTGCGTCATACGGCTAAACCCGAGTTAGCGAACAACCAc > 2:632120/1‑251 (MQ=255) aGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGATTGCGAACAACCACTTCCTg > 1:625314/1‑251 (MQ=255) ccacatcttcatggcttgtcAATGTTGAGTCAATGCTCGTTGGCCCGTGTTGTTTTAGATAACGTCCGTAGCCAGCTTAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGACCTCTAACTCCAACAAATGCCGGGTGATTTACTGGCAAATGTCCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTGATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCTAGGTCa < 2:127271/232‑1 (MQ=255) aaCAGCTTCCGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAAAGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGTCTGGCTCTCTAACGCCAACAAATGCCGGGTGCTTTACTGGCAAATGACCGGCGATAAAGCCGCCGCAGC‑CAACTGGTTGCGTCATACGGCTAAAACAGAGTTTGCGAACAACCAATTCCTTCAAGGTcgg > 2:18822/1‑249 (MQ=255) aGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGACGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATgg > 1:78804/1‑251 (MQ=255) cAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTATCCAGCTGAACCGTCTGGAAAACCTGCTGTGGAATGGCAAATATCCCAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATCACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCaa < 1:635106/251‑1 (MQ=255) ccTGGCAATGTTGATTCAGTGCTCGCTGGACTGTGGTGATTTAGATAAGGCCCGTAGCCATCTGAGCCGGCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACTCCAACAAAGTCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTg < 1:284884/251‑1 (MQ=255) cTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGCACAACCACTTCCTGCGAGGTCAATGGCGCAACATTGc > 2:307505/1‑251 (MQ=255) tGGCAATGTTGATTCAATGCTAGCTGGCCCGTGGTGATTTAGATAACGACCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATAACCGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGACGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCCGAGTTTGCGACCAAACACTTCCTGCAAGGTCAATGgcgaaaacttgcc > 2:639489/1‑241 (MQ=255) gtaattaaaagtccGCTGGCCGGTGGTGTTTTAGAGAACGCCCTTAGCCAAATAAACCGGCTTCAAAACCTAAGGTGGAATGGCAAAGATCACAGCGACTGGACCTCTAACAACAACAAAAGCAGGGTGATTGACTGGCAAATGACCGGCGATAAAGCCGCCGCTAC‑CCACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGTAAGGCCAATGGCGCAACAtataccttgcaca < 2:665889/238‑13 (MQ=255) cAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCtt > 1:161621/1‑251 (MQ=255) aaTGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTg < 1:646650/251‑1 (MQ=255) aTGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGc < 1:632120/251‑1 (MQ=255) aTGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGc > 1:254299/1‑251 (MQ=255) cGCTGGCCCGTGGGTTTTTAGATAACGCCCATAGCCAGCTTAACCGTCTGGAAAACCGTCTGGGGAAGGGCAAATATCACAGCGTCTGGATCTCTAACGCCAACAAATGCCGTGTAATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGACCGTGCACAAATCTTGCtt < 2:380862/248‑2 (MQ=255) cgtgggaaTTTAGATAACTCCTGTAGCCATCTGAACCGTCTGTAAAACCTGCTTGGGAATGTCAAAGATCACAGCGACGGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGTCGATAAAGCCGCCGCTGC‑CAACTGGTTTCGGCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGa < 1:661936/244‑1 (MQ=255) cGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGa < 1:141978/251‑1 (MQ=255) aTTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGa < 1:30303/102‑1 (MQ=255) aTTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGa > 2:30303/1‑102 (MQ=255) gCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCtt < 1:479813/218‑1 (MQ=255) gCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTtct < 1:639489/251‑1 (MQ=255) cGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCg > 1:389617/1‑250 (MQ=255) ccAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAAc > 1:430241/1‑251 (MQ=255) cAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGACCAACAACTTCCTGCAAGGTCACTGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCgaagacct > 2:501964/1‑248 (MQ=255) gCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTc > 1:595262/1‑250 (MQ=255) aCCGTCGGGAAAACCTGCTGGGGAAGGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAAGGCCGGGTGATTTACTGGCAAATGACCGGCGATAAATCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGaa < 2:286301/251‑1 (MQ=255) ccGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTCCTGGCCAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACCAATCTTGCTTGGCGCGTTTGAACCGGCAGAAATTGTTCTCgaag > 2:530532/1‑239 (MQ=255) ccGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCgaag < 1:530532/239‑1 (MQ=255) cgcctagAAAACCAGCTGGGGAATGGCAAATATCACATCGCCTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGCGTTTGCGACCAACCACTTCCTGCATGGCCAAAGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGTAATTGGTCTCGACGAAATCaacaaaa > 2:248332/7‑245 (MQ=255) cGTCTGGAAAACCTGCGGGGGAATGGCAAATATCACAGCGATTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGaaaa < 2:132803/251‑1 (MQ=255) gTCTGGAAAACCTGCTGGGGAAGGGTAAATAAGACAGCGACTGGATCTCTAACGCCAACAAAGGCCGGGTGATTTACGGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAAt < 2:208306/251‑1 (MQ=255) aaaaCCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCgg > 2:158786/1‑251 (MQ=255) ggggAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCAGGAGTCTGCGGt > 2:53989/1‑251 (MQ=255) ggAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTtg < 1:158786/251‑1 (MQ=255) cacaGCGACTGGATCTCTACCGCCAACAGATGCCGGGTGATTATCTGGAAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGGTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCa < 2:305313/250‑1 (MQ=255) aGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCg > 1:346889/1‑251 (MQ=255) cTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACACCCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAAcc > 2:592389/1‑251 (MQ=255) aTCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGCGTCTGCGGTTGATGAGCGATCTCAACCGTAACCTGtt > 2:143858/1‑251 (MQ=255) ctAACGCCAACAAAGTCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAACCTGTtgctg > 1:96355/1‑251 (MQ=255) gCCAACAAAGCCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAACCTGTTGCTGCTTaa < 2:96355/251‑1 (MQ=255) || CGTGCGCAGCTGTTATGGGCCTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAAGTCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGC‑CAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAACCTGTTGCTGCTTAA > NC_000913/3554810‑3555288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |