| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 7,618 | T→C | Q114Q (CAA→CAG) | yaaJ ← | putative transporter YaaJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 7,618 | 0 | T | C | 98.0% | 143.3 / ‑4.5 | 51 | Q114Q (CAA→CAG) | yaaJ | putative transporter YaaJ |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (28/21); total (30/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.11e-01 | |||||||||||
ATTGCCAGCAGAGTAAAGACAGCGAGAATAATGCCTGTCACCAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCGCGGGCAACGGCGTTCGCTTGAACTCCGCTGAAAATTATGCCATAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGACGTCACGTT‑CTTTATAAAGTTGTGCCAGAGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAAAAGACGGCTCCAGGTCCACCGGCGGTAATAGCCAGCGC‑AACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCAAGACTGGTACA‑CAATGACTGAAATGAGG‑TTAAACCGCCTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAA > NC_000913/7382‑7859 | atcgCCAGCAGAGCAAAGACAGCGAGAATAATACCTGGCACCAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCAGCACTTT‑CTTTATAAAGCTGTGCGAGGGAACa < 1:76969/248‑1 (MQ=255) cgCCAGCAGAGCAAAGACAGCGAGAATAATACCTGTCACCAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACAt < 1:563648/249‑1 (MQ=255) gCCAGCAGAGCAAAGACAGCGAGAATAATACCTATCACCAGCGGGGGAAAATCAACAGAAAAACTCAGGGCTCGCGCAACGGCGATCGCCTGAATTCCGCTGAAAATTATGACGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATACCCAGCCCGCGCGCCATATACCATGCCGTTCCGACACGCAACTGCCCATTGGCATACCGAT‑TTTTATAAAGCTGTGCGAGGGAACATTc > 2:676572/1‑251 (MQ=255) cagcagAGCAAAGACAGCGAGAATAATACCTGTCACCAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCgg > 1:274353/1‑251 (MQ=255) agcaaaGACAGCGAGAATAATACCTGTCACCAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGCCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCaaa > 1:283527/4‑249 (MQ=255) caaaGACAGCGAGAATAATACCTGTCACCAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACg > 1:444787/2‑249 (MQ=255) aaaGACAGCGAGAATAATAACTGTCAACAGCGGGGGAAAGTCAAAAGAAAAACTCAGGGATCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAAAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCAATTGGCATCACGTT‑ATTTATAAAGCTGTGCGAGGGAACCTTCGGCAAACGAgg > 1:588138/1‑251 (MQ=255) aGCGAGAATAATACCTGTCACCAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGcc > 1:675250/1‑250 (MQ=255) agaATAATACCTGTCAACAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCTCGAGCAACGGCGGTCGCCTGAATTCCGCTGAAAATTATGCAGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCAGCCACGACACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGCACATTCGGAAAACGAGGTCGcactgcc > 2:468907/1‑245 (MQ=255) ataataCCTGTCACCAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCACGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCCTATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGCGGTCGCCATTCCGa > 2:330703/1‑250 (MQ=255) aataccTGTCACCAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATa > 1:617306/5‑250 (MQ=255) accTGTCACCAGCGGGGGAAAATCAAAAGGAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAGTTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGATGAGCGAGGGAACATTCGGCAATCGAGGCCGCCATGCCGATAAAcg > 2:46497/2‑251 (MQ=255) ggTCACCAGCGGGGGAAAAGCAAAAGAAAAACGCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCAGGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCgg < 1:86498/250‑1 (MQ=255) tCACCAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGc > 1:140285/1‑250 (MQ=255) tCACCAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGAAAACGAGGGCGCCCTGCCGATAAACGCGGc > 2:508498/1‑250 (MQ=255) gggggAACATCAAACGAAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGCAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCCTATACCATGCCGGTCCGCCCCGCAACTGCCCCTGGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGACAAACGAGGACGCCCTGCCGATAAACGCGGCCACCcacac > 2:154775/1‑250 (MQ=255) aaactCAAAAGAAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCCCGCAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGCAGCCCTGCAGATAAACGCGTAAACCCACATcc > 2:195973/5‑248 (MQ=255) cAAAAGAAAAACTCAGGGCACGCGAAACGGCGTTCGCTTGAAGTCCGCTGAAAATTATGCCGCAGGCGATGAGCAAAAAGACGGCGAAAAGAACCCCCATCCAGCGCACCCCCAGCCCGCGCGCCTTATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGAc < 2:58691/250‑1 (MQ=255) aaaaGAAAAACTCAGGGCTCGCGCAACGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGCGCAAAAGGACGGCGAACAGAACGCCCCTCCAGCGCATCACCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGACACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGTGGTCGCCATGCCGCTAAACGCAGCAACCCACATCCAGAAGACgg > 1:320716/1‑251 (MQ=255) cccaccggcgtccgcctaaatcccGCTAAAAATTAGGCCGTGGGCGATGCGCAAAAAGCCGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGGGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTaa < 2:672594/229‑1 (MQ=255) cAACGGCGTTCGCCTGAATTCCGATGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAAATCGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGGGGACGCCATGCAGTTAAACGCGGAAACCCACATCCAGACGACTGCCACAGGTCCACccgcggcaaat > 2:657629/1‑246 (MQ=255) aaCGGCGTTCGCCTGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCACCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAAttg < 1:334784/251‑3 (MQ=255) aaCGGCGTTCGCCTGAATCCCGCGGAAAATTATGCCGTAGGCGATGACCAAAAAGACGGCGAACAGAACCCCCATCCAGCGCTCCCCCAGCCCGCGCGCCATATCCCAGCCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAAttg < 1:263093/251‑3 (MQ=255) gatCGCCTGAATTCCGCTGAAAATTATGCCGAAGGCGATGCGCAAAAAGACGGCGAACAGCACGCCCAACCGGCGCATCCCCAGCCCGCGCGCCATATACCATGACGGGCCGCCACGAAACTTCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTAGGCAACAGAAGTAGCCCTGCCGAACAACGCGACAACACACATACAGAAGCAGGCTCCACATCCACcgccgggaaaatacagc > 2:376219/3‑239 (MQ=255) cctGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTTCCCGCGC‑AAcc > 1:382952/3‑250 (MQ=255) cctGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGGAAtttcccacgcaacc > 1:632394/3‑238 (MQ=255) gaattCCGCCGAAAATTATTCCGTCGGCGATGATCAAAAAGCCGGCGAACAGAACCCCCATCCAGCTCATCCCCAGCCCGCGCGCCATATCCCAAGCCGGGCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCTAGCTC‑AACGCCg < 1:166098/247‑1 (MQ=255) aaTTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGC‑AACGCCGGCCAGGGTGCCGc > 1:67150/1‑251 (MQ=255) aTTATGCCGTAGGCAATGAGAAAAAAGCCGGCGAACAGACCGCCCAGCCAGCGCATCCCCAACCCGCGCGCCATATACCAGGCCGGTCCGCCACGAAACTGCCCAGTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGACGCCCTGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGC‑AACGCCGGCCAGGTTGCCGCt < 1:46497/251‑1 (MQ=255) cGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGC‑AACGCCGGCCAGGTTGCCGCTACCCACGCGcgcc < 1:154775/251‑1 (MQ=255) gATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGACC‑AACGCCGGCCAGGGTGCCCCCACCCACGCGcgccc > 1:284770/1‑250 (MQ=255) ccccctCCAGTGCACCCCCAGCCCGCGCGCCATATCCCACTCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAACCGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGC‑AACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCAAGACTGGTACA‑CAATGACTGAAATg < 1:565219/246‑1 (MQ=255) ccccgccaacccccgccccGCGCCCCATATCCCATCACGGTCCGCCAAGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGGCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAAGTGCCAGCGC‑AACGCCGGCCAGGGTGCCGCGACCCACGCGCGTCGCAAGACTGGTACA‑CAATGACTGAAATGAGG‑tt < 2:544714/235‑1 (MQ=255) ccAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCCGCGC‑AACGCCCGCCCGGGTGCCGCTACCCACGCGCGCCGCCATGCTGGGACA‑CAATGaagatcggaagcgcc > 1:480280/1‑237 (MQ=255) caccacccccccccGCGCCCCATATCCCATGCGGGTCCGCAACAAAACTGCCCATTGGCACCACGTG‑CTTTATAAAGCTGTGGGAGGGACCATCCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACAGCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGC‑AACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCAAGACTGGTACA‑CAATGACTGAAATGAGG‑TTAAAcc < 2:629151/240‑1 (MQ=255) gcATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAAATGCCCACGC‑AACGCCGGCCCGGGTGCCGCTAACCACGCGCGCCGCCAGACTGGGACA‑CAAAGACTGAAATGAGG‑TTaaaacc > 1:20508/1‑248 (MQ=255) cAGCCCGCGCGCCATATCCCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGC‑AACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCAAGACTGTTACA‑CAATGACTGAAATGAGG‑TTAAACCGCCTGGCt < 1:571211/251‑1 (MQ=255) ccccgcgccccaaaacacATGCCGGTCCACCACAAAGCTGCCCGTTGGCATCA‑GTTGCTTTATAAGGCGGTGCGGGGGAACATCCGGAAAACGAGGTCGCCATGCCGATAAACGCGGCACCCCACATCCAGAAGACGGCACCAGGTCAACCGGCGGTAATTGCCAGCGT‑AACGCCGGCCAGGTGGCCGCTCCCCACGCGCGCCGAAAGACTGGTACA‑CAATGACTGAAATGAGG‑TTAAACCGCCTGGCtgt < 2:107214/234‑1 (MQ=255) ccATATCCCATGCCGGCCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGAAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGC‑AACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCAAGACTGGTACA‑CAATGACTGAAATGAGG‑TTAAACCGCCTGGCTGTGGATGAATg < 1:603899/251‑1 (MQ=255) cATAGACCATGCCGGGCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATGCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGC‑AACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCAAGAc < 1:86826/200‑1 (MQ=255) ataCCATGCCGTCCCCCCACGAACCTGCCCATGGGCATCACGTT‑CTTAATAAACCGGTGCGAGGTACCATCCGCCAAACGAGGTCGCCTTGCCGATAAACGCGGCAACCCACACCCAGAATACGGCTCCAGGTCCACCGGCGGTAATGGCCAGCGC‑AACGCCGGCCAGGTTGCCGCTACCCCCGCGCGCCGTAAGACTTGTACA‑CAATGACTGAAATGAGG‑TTAAACCGCCTGGCTGTGGATGAATGCTAt < 1:340879/251‑1 (MQ=255) cATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGAAAATTCCAGCGCCAAC‑CCGGACAGGGTGCCGCCACCCCCACGGCCCGCAAGGCTGGGCAA‑CACTGAATGAAATGAGG‑GTAAACCCCCTGGCTGTGGATGAATGCTCttttt > 2:415830/1‑251 (MQ=255) cGGTCCGCCACGAACCTGCCCATTGGCATCCCTTC‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGC‑AACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCAAGACTGGTACA‑CAATGACTGAAATGAGG‑TTAAACCGCCTGGCTGTGGATGAATGCTATTTTTAAGAc < 1:144357/251‑1 (MQ=255) cGGTCCGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGC‑AACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCAAGACTGGTACA‑CAATGACTGAAATGAGG‑TTa < 1:668087/215‑1 (MQ=255) cGCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGAAATTGCCAGCGC‑AAAGCCGGCCAGGATGCCGCTACCCACGCGCGCCGCCAGACTGGTACA‑CCATGACTGGAATGAGG‑GTAAACCGCCTGGCTTTGGGTGTATGCTATTTTTAAggcctttg > 1:480929/1‑244 (MQ=255) gCCACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCCTCGC‑AACGCCGGCCAGGGTGCCGCCACCCCCCCGCGCCGCATGACTGGGACA‑CAATGGCTGAACAGAGG‑TTAAACCGCACGGCTTGGGATGAATGATCTTTTTAAAACtttttc > 2:526969/1‑249 (MQ=255) cACGAAACTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGC‑AACGCCGGCCCGGTTGCCGCTACCCACGCGCGCCGCAAGACTGGGACA‑CCATGACTGAAATGAGG‑TTAAACCGCCTGGCTGTGGGTGAATGCTATTTTTAAGACTTTTGccc > 1:364508/1‑250 (MQ=255) caaaaccgcccattggcatcccttacTTTATAAAGCTGTGCGAGGGAACATGCGGCAAATGGGGTCGCCAGGCCGAAAAACGGGGCAACCCACACCCAGAAGACGGCTCCTGGTCCACGGGCGGTAATTGCCAGCGC‑AACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCAGGACTGGTACA‑CAATGACTGAAATGAGG‑TTAAACCGCCTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCaaa < 2:675250/226‑1 (MQ=255) aCTGCCCATTGGCATCACGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGGAATTGCCAGCGC‑AAAGCCGGCCAGGGTGCCGCTACCCCCGCGCGCCGCAAGGCTGGTACA‑CAATGACTGAAATGAGG‑TTAAACCGCCGGGGTGTGGGAGAATGCTATTTTTAAACCTTTTGCCAAACTgg > 1:227743/1‑251 (MQ=255) cGTT‑CTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAAATGCCCGCCC‑AACGCCGGCCAGGTTGCCGCTACCCCCGCTCGCAGCAAGACTGG‑ACAACAATGCTTGAAATTGGG‑TTTAACCGCCTCGATGTGGGTGAATGCTCATTTTAACACTTTTTCCAAACTGGCggggctagaggaaaa > 2:7721/1‑237 (MQ=255) ttATAAAGTTGTGCCAGAGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAAAAGACGGCTCCAGGTCCACCGGCGGTTATAGCCAGCCC‑CACCCCGGCCAGGGTGCCGCCACCCACCCGCGCCGCCAGAACGGGACA‑CAATAGCTGCAATTAGGGTTAAACC‑CCCGGCTGGGGAGGAAGGCGATTTTTAAAAAATTTGACCAACTGGCgggggggaaggaaacacacac > 2:120823/1‑231 (MQ=255) | ATTGCCAGCAGAGTAAAGACAGCGAGAATAATGCCTGTCACCAGCGGGGGAAAATCAAAAGAAAAACTCAGGGCGCGGGCAACGGCGTTCGCTTGAACTCCGCTGAAAATTATGCCATAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGACGTCACGTT‑CTTTATAAAGTTGTGCCAGAGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAAAAGACGGCTCCAGGTCCACCGGCGGTAATAGCCAGCGC‑AACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCAAGACTGGTACA‑CAATGACTGAAATGAGG‑TTAAACCGCCTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAA > NC_000913/7382‑7859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |