| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,637,862 | C→A | I389I (ATC→ATA) | creC → | sensory histidine kinase CreC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,637,862 | 0 | C | A | 98.6% | 224.1 / NA | 73 | I389I (ATC→ATA) | creC | sensory histidine kinase CreC |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (43/28); total (45/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAGTCGTTCTGACTGCTGTTGATGTGGCGGCATTATTCCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAAAATCACTCTGCATGTTACGCCCACCGAGGTTAACGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGAAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑ACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCTTTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTC > NC_000913/4637616‑4638103 | ggTAGAAACGTTACGACGCCAGGCAAGACTGGAGAATCGTCAGGAAGTCGTTCTGACTGTTGTTGATGTGGCGGCATTATTTCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACg < 1:77041/250‑1 (MQ=255) aGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAGGCGTTCTGACTGATGTTGATGTGGCGGAGTTATTTCGCCGCGTCAGCGAAACGCGCACCGTGCAGTTGGCAGAAAAAACCATCACTCTACATGTTATGCCCCCTGAGGTTACTGTGGCTGCTGAACCGGCGTTACTGGAGGAGGCGCTTGGGAATTTACTTGATAACGACATCGATTTTACCCCCGAGATCGGTCGCATAACGcgat > 2:314724/1‑248 (MQ=255) tactacGCCAGGCAAGACTGGAGAATCGTCAGGAAGTCGTTCTGACTGTTGTTGATGTGGCGGCATTATTTCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGa < 1:178703/250‑1 (MQ=255) tactacGCCAGGCAAGACTGGAGAATCGTCAGGAAGCCGTTCTGACTGTTGTTGATGTGGCGGCATTATTTCGCCGCGTCAGCGAAGCGCGCCCCGGGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCCTCGATTTTACCCCCGCGAGCGGTCGCATAACCCTAAGCGCCGa > 1:587465/1‑250 (MQ=255) actacGCCAGGCAAGACTGGAGAATCGTCAGGAAGTCGTTCTGACTGTTGTTGATGTGGCGGCATTATTTCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATACCGCTAAGCGCCGa > 1:123975/1‑249 (MQ=255) gCCAGGCAAGACTGGAGAATCGTCAGGAAGTCGTTCTGACTGTTGTTGATGTGGCGGCATTATTTCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGAt < 1:352773/251‑1 (MQ=255) cAAGACTGGAGAATCGTCAGGAAGTCGTTCTGACTGTTGTTGATGTGGCGGCATTGTTTCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCCCTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGCACCGGCGGTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCTATTTTACCCCCGAGGGGGGTCGCATTATGCTAAGCGCCGAAGTggggcaggg > 2:459385/1‑243 (MQ=255) cTGGAGAATCGTCAGGAAGTCGTTCTGACTGTTGTTGATGTGGCGGCATTATTTCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGCTCAGGAACACGt > 1:186844/1‑251 (MQ=255) ggAGAATCGTCATGAAGTCGTTCTGACTGTTGTTGATGTGGCTGCATTATTTCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTcg < 2:526041/251‑2 (MQ=255) ggAGAATCGTCAGGAAGTCGTTCTGACTGTTGTTGATGTGGCGGCATTATTTCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGt < 1:306957/249‑1 (MQ=255) aaGTCGTTCTGACTGTTGTTGATGTGTCGGCATTATTTCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTg < 1:306417/251‑1 (MQ=255) gTCGTTCTGACTGTTGTTGATGTGGCGGCATTATTTCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTgg > 1:61088/1‑250 (MQ=255) gTTCTGACTGTTGTTGATGTGGCGGCATTATTTCGCCGCGTCAGCGAAGCGCGCCCCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGCGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGCGAGCGGTCGCATAACGCTAAGCGCCGCAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATAc > 1:69701/1‑251 (MQ=255) cTGACTGTTGTTGATGTGGCGGCATTATTTCGCCGCGTCAGCGAAGCGCGCTCCGTGCAGTTGGCAGAAAAAAACATCACTCTACCTGTTATGCCCACTGAGGGTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCCAGAGCGGTCGCCTAACGCTAAGCGCCGAAATGGAGCAGGAACACGGC‑GCCCTTAAGGTGCTGGATAcccg > 1:430984/1‑249 (MQ=255) gactgtggTTGATGTGGCGGCATTATTTCTCCGCGTCAGCGAAGCGCGCACCGTGCCGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCCCTGAGGTTACTGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGAAACCCGTC‑GCCCTTAAGGTGCTGGATACCGGt > 1:465482/8‑250 (MQ=255) ttgTTGATGTGGCGGCATTATTTCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGGGCTGGATACCGGTAGTggg > 1:137586/2‑250 (MQ=255) ggtgGCTGCATTATTTCGCCGCGTCAGCGAAGCGCGAACCGTGCAGTTGGAAGAAAAAAACATCACTCTACATGTTATTCCCACTGAGTTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAGCGCCATCGATTTTCCCCCCGAGAGCGGTCGCATATCGCTAAGCGCCGAAGTGGATCATGAACACGTC‑GCCCTTAAGGGGCTGGATACCGGTAGTCGTATTCCt < 2:604728/249‑1 (MQ=255) cggcATTATTTCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGACAGAAAAAAACATAACTCTACATGTTATGCCCACTGCGGATAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTAc > 1:309899/1‑251 (MQ=255) ggcATTATTTCGCCGCGTCAGCGGAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTAcg < 1:489582/251‑1 (MQ=255) gccgcGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGGGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGt > 1:386117/1‑251 (MQ=255) gTCAGCGAAGCGCGCTCCGTGCAGTGAGAAGAAAAAAACAGCACGCTACAGGTTAAGCCCACGGAGGTGAATGTTGCAGCTGAACCGGCGTTACCGTAGCAGGAGCTGGGGAATTTACTTGATAACGCCATCGAATTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGATGGATAGCGGTAGTGGTATTCCTGACATCGCGCTGTCACTTAtttt < 2:69701/251‑1 (MQ=255) tCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGATATGCCCACTGAGGTTAATCTTGCTGCTGAACCGGCGTTACTGGAGCAGACGCTGCGGAATTTACTGGATAACGCAATAGATTTTACCCCCGAAAGCGGTCGCATCACGCTAAGCGCAGAAGGGGATCAGGAACAAGTC‑CCCCTTAAGGTGCAGGAAACCGGTAGGGGTTTTCATGACTACGCGATGTCACGAAttttt > 1:668988/1‑251 (MQ=255) aGCGCGCACCGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCt < 1:10495/251‑1 (MQ=255) cgcACCGTGCAGTTGGCAGAAAAAAACAGCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGGCGCATAACGCTAAGCGCCGAAGTGGATCAGGATCACGTC‑GCCCTTAAGGTGCTGGATTCCGGTAGTGGTATTCCTGACTGCGCGCTGTCATGTATTTTTGAGCGTTTTTa < 2:318241/251‑1 (MQ=255) cccGTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTActc < 1:384307/250‑1 (MQ=255) gTGCAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTTCTCttt < 2:165030/251‑1 (MQ=255) cAGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAAAGCTAAGCGCCGAAGTGGATCAGGCACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTATTCTTTGcc > 2:7121/1‑251 (MQ=255) aGTTGGCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGccg < 1:60501/251‑2 (MQ=255) gCAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATACCGCCATCGATTTTACCCCCGAGAGCGGTCGCCTAACGCTAAGCGCCGAAGTAGATCAGGAACACGTC‑GCCCTTCAGGTGCCGGCTACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGccgcggtc > 2:86737/1‑245 (MQ=255) cAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGc > 1:535481/1‑250 (MQ=255) cAGAAAAAAACATCACTCTACATGTTATGCCCACTGAGGTTAATGTTGATGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGAC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGGATTCCTGCCTACGCGCTGTCACGTCTTGTTGAACGCTTTTACTCTTTGCCGCGTGc > 2:598509/1‑250 (MQ=255) aGAAAAAAACATCACTCTACATGTTATGCACACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGCTCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGAGGTATTCCTGACTACGCGCTGTCCCGTATTTTTGAACGCTTTTAATCTTTGCCGCGTGcc > 1:433202/1‑249 (MQ=255) aaaaaaacaTCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAAt < 1:628074/251‑1 (MQ=255) aaacaTCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGc > 1:281782/5‑251 (MQ=255) tCACTCTACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCaaaa > 1:547763/1‑250 (MQ=255) ctctACATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTCGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGAAAAAAagc > 1:655592/1‑251 (MQ=255) ctacATGTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAagc > 2:161893/4‑249 (MQ=255) gTTATGCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCt > 1:263633/1‑251 (MQ=255) gCCCACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGt > 1:562475/1‑251 (MQ=255) ccactgagtgtAACGTTGCTGCTGAACCGGCGTGACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATGTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGCC‑TCCCTTAAGGTGCTGGATACCGGGAGTGGTATTCCTGACTACGCGCtgtc < 2:95481/174‑4 (MQ=255) ccACTGAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCtgtc > 1:95481/1‑181 (MQ=255) tgAGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGCTAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGCAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGCTACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTATTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGTCGt > 2:409127/2‑251 (MQ=255) aGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTc < 1:3515/251‑1 (MQ=255) aGGTTAATGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTc < 2:281782/251‑1 (MQ=255) tgTTGCTGCTGAACCCGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGCTTTTACCACCGAGAGCGGTGGCATAACGCTAAGCGACGAAGTGGCTCAGGGACACGTC‑GCCCTTAAGGTGCTGGCTACCGGTAGTGGAATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGGGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGTGTTAGTCAGTg > 2:264863/2‑251 (MQ=255) tgctgcTGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAgg > 1:181873/1‑251 (MQ=255) gctgctGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATTCCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTTAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGt < 1:264863/251‑1 (MQ=255) gctgctGAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGGAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCAGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTccttggtggagg > 2:587711/1‑240 (MQ=255) ctgAACCGGCGTTACTGGAGCCGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTTCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGGTGGCGTTCGTCAGTGAGGTCGcc > 2:121530/1‑251 (MQ=255) gAACCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCg < 1:428969/251‑1 (MQ=255) aCCGGCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCgtt < 1:161893/251‑1 (MQ=255) cGGCGTTACTGGAGCAGACGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGCGCGGTCGCATAACGCTAAGCGCCGCAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGAGGTATTCCTGACTACGCGCTGTCCAGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAACTGGGCAAAATAGCAGCGGCCTGGGGTTGGCGTTCGTCAGTggtgtcgcacggctg > 2:644496/1‑237 (MQ=255) ggCGTTACTGGAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCgtttgt < 1:7121/251‑1 (MQ=255) ggAGCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCAc < 1:490717/149‑1 (MQ=255) ggAGCAGGCACTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAAAGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCAc > 2:490717/1‑149 (MQ=255) gCAGGCGCTGGGGAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGGCGCCCGTTTGTTTAACGGCGa > 2:62712/1‑249 (MQ=255) aaTTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCa > 1:524426/1‑250 (MQ=255) tttACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAACTGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGACGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACg > 1:56344/1‑251 (MQ=255) ttACTGGATATCGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGTACACGGC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGGCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGGCTGGGGTTGGCGTGCGTCAGTGAGGTCGCCCGTTTGTTTAACGTCGAAGTCACGCTGCGCAACg < 2:655592/250‑1 (MQ=255) tACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGt < 1:184287/250‑1 (MQ=255) tACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGCCGCATAACGCTAAGCGACGAAGTGGATCAGGAACACGTC‑GCCCTTATGGAGCTGGATACCGGTAGTGGTATTCCTGACTACGCGATGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGAGAGGCCGCCCGATTGTTTAACGGAGAAGTCACGCAGCGCaaaggg > 2:622637/1‑247 (MQ=255) ggATAACGCCATCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAgg < 1:459385/251‑1 (MQ=255) gATAACGCCATCGATTTTACCCCCGAGAGCGGACGCATAACGCTAAGCGCCGAAGTGGATCAGGAACCCGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCCCGTATTTTTGAACGCTTTTACTCTTTGCCGCGGGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGGCAGTGAGGTCGCCCGTTTGTTTAACGGCGAATACACGCTGCGCTACGTGCAgg > 2:329964/1‑250 (MQ=255) taactacATCGATTTTACACCCGAGAGCGGCCGCATAACGCTAAGCGCCGAAATTGATCAGGACCACGTCGAC‑CTTAAGGTGCTGGTTACCGGAAGTGGTATTCCTGACTAAGCGCTGACACGTATTTTTGAACGAATTTCCTCTTTGCCGCGTGCACATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGCCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTAACGCTGCGCAACGTGCAGGa > 2:586035/7‑249 (MQ=255) aTCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCaaaaaa < 1:423594/163‑1 (MQ=255) aTCGATTTTACCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCaaaaaa > 2:423594/1‑163 (MQ=255) aCCCCCGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGCCTACGCGCTGTCACGTATTTTTGAAAGCGTTTACTCTTTGTCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGAGAGGGCGCCCGTTTTTTTAACGGCGAAGGCACGCGGCGCGCAGTGCAGGAAGGGGGCGTGCTGGGCTc > 2:558172/1‑251 (MQ=255) cccccGATAGCGGTCGCATAAAGCTAAGCGCCGAAGTGAATCAGGCACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCATGACTACGCGCTGTCACGTATTTATGAACGCTTTTACTCTTTTCCGCGTGCAAATTGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAAAGGAGGATCCACGCTGCGAAACGTACAGGAAGGGGGCGTgatgtccgcg > 2:182666/1‑242 (MQ=255) cccccGAGAGCGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCATGCTGGCCTCg > 1:352120/1‑251 (MQ=255) cGGTCGCATAACGCTAAGCGCCGAAGTGGATCCGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAg > 2:465871/1‑171 (MQ=255) cGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAg < 1:465871/171‑1 (MQ=255) cGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTc > 1:29651/1‑251 (MQ=255) cGGTCGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑GCCCTTAAGGAGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCTTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTACGTGAGGTCCCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGAGCAGGCCTCGCTTCGTCttt > 2:527712/1‑250 (MQ=255) | GGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAGTCGTTCTGACTGCTGTTGATGTGGCGGCATTATTCCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAAAATCACTCTGCATGTTACGCCCACCGAGGTTAACGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGAAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTC‑ACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCTTTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTC > NC_000913/4637616‑4638103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |