| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,637,133 | T→G | S146S (TCT→TCG) | creC → | sensory histidine kinase CreC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,637,133 | 0 | T | G | 98.7% | 237.5 / ‑4.3 | 74 | S146S (TCT→TCG) | creC | sensory histidine kinase CreC |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base G (38/35); total (39/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.17e-01 | |||||||||||
GGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGTTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCTATTGCCCGGCTCACTCGCTATGCTGATTCCGTCACTGACAATAAGCCCGTTCCTC > NC_000913/4636888‑4637377 | gggCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGat < 1:223812/251‑1 (MQ=255) ggCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGatg > 1:529102/1‑251 (MQ=255) ccggCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGAGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGTCGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCATGCCGTTCCCGAAAGTTCGGTGATGTATGTTGCCGc > 2:4276/3‑251 (MQ=255) tAATCCGCTACAACATATCCCGTTTCGCGCCAATATCGGTGGTATTAACAAAGTTCGCATTGA‑TATTCATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATCACGTCTGCCTAACGTTGCGTGGTCAGTATGTTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGCCCGGTGATGTATGTTGCCGCTCCGAtt < 2:97660/250‑1 (MQ=255) tAATCAGCTACAACATCGCCCGTTTCGCGCCACTATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAACGCAGTTGGGCAGGATTATTCGCGCTGGAACGACGTCTGGCTAACGTTGCGTGGTCAGTTTGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCTGAAAGTTCGGTGATGTATGGTGCCGCGCCggtt > 2:270227/1‑247 (MQ=255) cAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGa < 1:134192/251‑1 (MQ=255) caacaTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTc < 1:304694/251‑1 (MQ=255) caTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTTCCGCGCCGATTATGGACGGCTcgcg > 2:260222/1‑251 (MQ=255) caTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTcgcg > 1:508434/1‑251 (MQ=255) cgcttttCGCGCCATTTGCGGTTGCATTAACAAAGTGCGCAATGAATAT‑CATGTCAATATGACCGATTCGCAGGTTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGGGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTa < 2:656271/247‑1 (MQ=255) ccctgttCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAAGAAAGACGTTGGGCAGGATTTTTCGCGCTGGAATGTCGGCTGGTTAACGTTGCGTGGTCCGTATGGTGCGCGCCGCACGTTGGAAAATCCTGCCGATCCCGAAAGTGCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTa < 1:594315/246‑1 (MQ=255) tttCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTgg > 1:335265/1‑251 (MQ=255) cgcCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGttt > 1:14871/1‑251 (MQ=255) cAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTg > 1:229176/1‑250 (MQ=255) atCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGatg > 1:52283/1‑198 (MQ=255) atCGGTGGCATTAACAAAGTGCGCAAGGAATAT‑CATGGCTATATGACTGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATGATGCGCGCTGGAATGACGTCTGGCTACCGTTGCGTGGTCAGTAGGGTGCGCGAAGCACGGTGCAAAACCCTGCCGATCCCGAAAGTTCGGTGagg < 2:52283/198‑3 (MQ=255) aaaaGTGCGAAAGGAATGT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCGGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTGGCAAACCCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAAcg < 2:590219/250‑1 (MQ=255) aaaGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCACACCGAAcgc > 2:121264/1‑251 (MQ=255) gctaTGAATAT‑CATGTCTATATGACCGATTCGGAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTGGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATg < 2:255465/248‑1 (MQ=255) aaTGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑c > 1:600317/1‑251 (MQ=255) aaTGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑c > 1:196753/1‑251 (MQ=255) aatcctgtctatctgctcgtttcgcAGGGTAAAGTATTGCTCGATTCGGAAAAGAATGCCGTTGGGAAGGTGTTTTCGCGCTGGAATGATGACTGTCTAACGGTGCGTGGTGAGTAGGGTGCTCGCAGCATGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGGAGGTTGCCGCGCCGATTATGGACGGGGCGCGGCTGATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGT‑CTCCGGt < 2:602867/229‑1 (MQ=255) cATGTCTATATGACTGATTCGCAGGTTAAAGTTTTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGTCGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCa < 2:14871/250‑1 (MQ=255) cGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTagcgagc > 1:183838/1‑251 (MQ=255) attcgcAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGCTGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGc > 2:82391/4‑191 (MQ=255) attcgcAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGc < 1:82391/188‑1 (MQ=255) agtcgcAGGGTAACGTATTGTGCGATGCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCTCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAAGCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGGAGCGAgcgg < 2:126663/248‑1 (MQ=255) gcAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAAGCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGaa < 1:620334/251‑1 (MQ=255) aaaGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATg < 1:580329/251‑1 (MQ=255) aaGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATgg < 1:260222/251‑1 (MQ=255) gTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTATGGCTAACGTTGAGTGGACAGTATGGTGCGAGCAGCACGTAGCAAAATCCTGCCGATCCCGAAAGTGCGGAGATGTATGTTGACGCGCAGATTATGGACGGCTCGCGGCTTATTGGAGTTTTGAGCGTAGGCAAACCGAAAGCGGCG‑TGGACTCCGGGCCTTAAGCGTCGCGAGAGGCGGATTTTATgggg > 2:203695/1‑250 (MQ=255) tATTGTTCGATGCGGCAAATAAAACCGTTGGGCAGGATTATTCGCGCTGGACTGACGTCTGGATAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGACAGTTCGGTGATGTATGTTGCCGAGACGATTATGGACGGCCCGCGGCTTAATGGCGTTTTGATCGTAGGCTACACGCACGCGGAGCAGG‑CTACGGTCATGACGCGTAGCGAGCCGCGAATTTTATTGGcc > 2:126654/1‑251 (MQ=255) aTTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGGTCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCTTTAAGCGTAGCGAGCGGCGAATTTTAGGGGcc > 2:337048/1‑250 (MQ=255) tgttcctttCGGAAAAAAAAGCCGTGGGGCAGGATTATTCGCGCTGGAATAACTTCTGTCTAACGTTGCTTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAg < 2:508434/243‑1 (MQ=255) cGATTCGGCAAATAAAGACGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGAAAACTCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCACGGCTTATTGGCGTTTTTAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAgcaccc > 2:585194/1‑247 (MQ=255) tCGGCAAATAAAGCCGTTGGGCAGGATTACTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTGGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCAttt < 1:120465/250‑1 (MQ=255) cGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTttg < 1:229325/251‑1 (MQ=255) cGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTttg > 1:335950/1‑251 (MQ=255) gCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTttgct > 1:310793/1‑249 (MQ=255) tAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTgggg > 1:673389/1‑250 (MQ=255) tAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGAATATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGAAGGCCAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTAGTGGCAAGCGCCATTTTGCTggggg > 2:68293/1‑250 (MQ=255) ggCCGTTGGGCAGGATTATTCGGGTTGGAATGAGGTCTGGCTAGCGTTGCGTGGTTAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTg < 2:183773/250‑1 (MQ=255) aGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGAATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGAGAATTTTATGGGCCAGCGCCATTTTGTTGGGGATTg > 1:246817/1‑251 (MQ=255) ccGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGc > 1:116988/1‑250 (MQ=255) gggcAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGt > 1:676809/4‑251 (MQ=255) ggATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTg > 1:283024/1‑251 (MQ=255) ttattCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGGGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTTTGGGCCAGCGCCATTTTGCTGGGGTTTGCACTGGTGATTgtcg > 2:340328/1‑248 (MQ=255) tCGCGCTGGAATGACGTCTGGCTCACGTTGCGTGGTCAGTATGGTGCGCGAAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCACGCGGATTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCCTTAAGCGTAGCGAGCGTCGATTTTTATGGGCCAGCGCCCTTTTGCAGGGGATTGACCGGGTGATTGGCGCAgg > 2:631409/1‑251 (MQ=255) tGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGAACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTAGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGt > 1:76117/1‑251 (MQ=255) ggAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATgg < 1:181025/249‑1 (MQ=255) gaatgactttgtgcataCGTTGCGGGGGCAGTTTGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGGGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGttt < 2:489152/235‑1 (MQ=255) gAATGACGTCTGTCTAACGTTGCGTGGGCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGGTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGttt < 1:631409/251‑1 (MQ=255) aaTGACGGCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTtg < 1:572861/251‑1 (MQ=255) gACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTAATTGGCCCAGGCATGGTTtggtg > 1:237566/1‑251 (MQ=255) gttAACGTGGAGTGGTCAGTATGGTGCGCGAGGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAAcc < 2:673389/249‑1 (MQ=255) cgtggcgtgtcaaGTATGGGGCGCGCAGCCCGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGGTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATGTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGctcc < 2:310793/239‑2 (MQ=255) gTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGcc < 1:121264/251‑1 (MQ=255) tgggcAGTATGGTGCGCGCAGCACGTTGCCAAATCCTGCAGCTCCCGCACGTTCGGGGATGTATGTTGCCGCGCCGATTCTGGACGGCGCGCGGCTTCTTGGCGTTTTGAGCGGCGGCCAACCGAACGCGGCGATGG‑CTCCGGTCCTTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCAATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGGTTGGTGGATCAACCGCGCCATTGccc > 2:130575/5‑251 (MQ=255) cAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGTTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGAt < 1:399393/131‑1 (MQ=255) cAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCt < 1:278620/251‑1 (MQ=255) aTGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCTCACt > 1:151128/1‑251 (MQ=255) aTGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCTCACt > 1:226275/1‑251 (MQ=255) aTGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCTCACt > 1:426605/1‑251 (MQ=255) cgcgacgcaagTTGAAAAAGCCTGCCGATCCCGAAAGTTCGGGGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCTGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGTTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCTCACTCGCTAt < 2:233709/241‑1 (MQ=255) gcaCGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCTCACTCGCTATGCCGAt > 1:429031/1‑251 (MQ=255) caCGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGCCGTTTTGATCGGAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCTGCGCCGTTTTGCTGGGGATTGCACTGGTGATTGGCGCAGTCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCTCACTCGCTATGCCGAtt < 1:295852/251‑1 (MQ=255) gCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCTCACTCGCTATGCCGATTCCGTc < 1:30617/250‑1 (MQ=255) gCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCCGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCTCACTCGCTATGCCGATTCCGTCACTGACAATa > 1:77052/1‑250 (MQ=255) cGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGGTTGGTGGATCAACCGCTCCATTGCCCGGCTCACTAGCTATGCCGATTCCGTCACTGACACTAAGc > 2:196803/1‑251 (MQ=255) aTCCCGAAAGTTCGGTGCTGTATGTTGCCTCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGGGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGGGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCTCACTCGCTATGCCGATTCCGTCACTGACAATAAGc < 2:116988/249‑1 (MQ=255) aTCCCGAAAGTTCGGTGATGTCTGTTGCCGAGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCTCACTCGCTATGCCGATTACGTCACTGACAATAAGccc > 1:67139/1‑251 (MQ=255) aTCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAAc < 1:261896/197‑1 (MQ=255) aaaGTTCGGTGTTGTATGTTGCCGCGCCGATTATGGACGGCTCGAGGCTTATTGGCGTTTTGAGCGGAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCTCACTCGCTATGCCGATTCCGTCACTGACAATAAGCCCGTTCct < 2:529102/251‑1 (MQ=255) aaGTTCGGAGATGTATGTTGCCGCGCCGATTATGGACGACTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGCTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCCATTGCCCGGCTCACTCGCTATGCCGATTCCGTCACTGACAATAAGCCCGTTCctc > 1:174373/1‑251 (MQ=255) | GGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGG‑CTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGTTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCTATTGCCCGGCTCACTCGCTATGCTGATTCCGTCACTGACAATAAGCCCGTTCCTC > NC_000913/4636888‑4637377 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |