| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,637,001 | C→T | G102G (GGC→GGT) | creC → | sensory histidine kinase CreC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,637,001 | 0 | C | T | 98.2% | 157.2 / ‑4.5 | 54 | G102G (GGC→GGT) | creC | sensory histidine kinase CreC |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (25/28); total (26/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.65e-01 | |||||||||||
TACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGAA > NC_000913/4636760‑4637245 | tACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCCACTGGCGCCGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCCATGAAAAT‑CATGTCTCTATGACCGATTCGCAGGGTAAAGTATTg > 2:229325/1‑251 (MQ=255) aTTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGAtt < 1:374813/250‑1 (MQ=255) aTTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGAAGTTAATCGATACCGCAACGTTGCTGGCGGCGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGAAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGGGGCATTAACAAAGTGCGGAATGAATAT‑CAAGTCTATATGACCGATTCGCCGGGTAAAGAATTGTTCGATTc > 1:565927/1‑251 (MQ=255) gtgtgttCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAATGGAGGGGACGGTAATCGATACCTGAACGTTGCTTGCGGAGCTGGCGCGGCCCGATTTTCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCATCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGGGCGCAATGAATAT‑CATGTCTATATGACCGTTTCGCAGGGTAAAGTATTGGTCGATTc < 2:333231/244‑1 (MQ=255) cAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAAt > 1:489152/1‑250 (MQ=255) aaaGAAGTTAAACCGGGCGGGCGAAGATCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATaa < 2:480453/251‑1 (MQ=255) aagaagTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATaa > 1:126663/1‑250 (MQ=255) agagCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTAGCAGGGTAAAGTATTGTTCGATTAGTCAAATAAAGCCGTTGGGCAGGATTATTggcg > 2:572861/1‑251 (MQ=255) gtgagggggagttaatcgaacccGCAACGTTGCTGGGGGAGCTGGCGCGTCCCGATGTGCTCTCTGGAGACCCAACGCATGGTCAACTGGCGCAGGCGTTTAATCAGCTACAACAGCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATAGGTCCGATTCGTAGGGTAAAGTATGGTTCGATTCGGCATATAAACCCGTTTGGCAGGATGATTCGCGCTGGAAt < 2:279435/230‑1 (MQ=255) taaTCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGGTTTGCTCTCTGGGGACCCAACGCATGGTCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGGTTCGCGCCAATATCGGTTGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTTTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCACGCTGGAATGACGTCTGGcg > 1:519507/3‑249 (MQ=255) cccGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTTCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACTTCTGGCTAACGTTGCg < 2:297082/250‑1 (MQ=255) cGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAg < 1:408000/251‑1 (MQ=255) ggCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGCTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCgcagc > 1:511138/1‑250 (MQ=255) gcgcGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCAc > 1:51527/1‑251 (MQ=255) gCTCTCTGGGGACCCACCGCATGGGCAACTGGCGAAGGCGTTTAATCAGCTCCAACACCGCCCGGTTCGCGCCAATATTGGTGGCATTAACAAAGGTCGCAATGAATAT‑CATGTCTTTATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCTGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCTCGCAGTACGTTGCAATATCCTg < 2:519507/251‑1 (MQ=255) gCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTg > 1:590219/1‑251 (MQ=255) gCTCGCTGTGGACCCAACGCATGGGCAACTGGCGCAGGGTTTTAATTATCTACAACATCTCCCGTTTCGCGCCAATATCGGTGGGATTAACAAAGTGCTCAATGAATAT‑CATGTCTTTATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCt < 1:628725/250‑1 (MQ=255) ctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCg < 1:136620/249‑1 (MQ=255) ggggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATcc < 1:49543/251‑1 (MQ=255) ggggACCCAACGCATGGGCAACTGGCCCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGTTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAATTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGAt < 1:117721/249‑1 (MQ=255) cccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCg > 1:331181/1‑201 (MQ=255) cccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGaaa < 1:242457/251‑1 (MQ=255) cccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGaa > 1:217120/1‑250 (MQ=255) cccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGGCTGGCTAACGTTGCg < 2:331181/201‑1 (MQ=255) gggCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGat < 1:223812/251‑1 (MQ=255) ggCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGatg > 1:529102/1‑251 (MQ=255) ccggCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGAGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGTCGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCATGCCGTTCCCGAAAGTTCGGTGATGTATGTTGCCGc > 2:4276/3‑251 (MQ=255) tAATCCGCTACAACATATCCCGTTTCGCGCCAATATCGGTGGTATTAACAAAGTTCGCATTGA‑TATTCATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATCACGTCTGCCTAACGTTGCGTGGTCAGTATGTTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGCCCGGTGATGTATGTTGCCGCTCCGAtt < 2:97660/250‑1 (MQ=255) tAATCAGCTACAACATCGCCCGTTTCGCGCCACTATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAACGCAGTTGGGCAGGATTATTCGCGCTGGAACGACGTCTGGCTAACGTTGCGTGGTCAGTTTGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCTGAAAGTTCGGTGATGTATGGTGCCGCGCCggtt > 2:270227/1‑247 (MQ=255) cAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGa < 1:134192/251‑1 (MQ=255) caacaTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTc < 1:304694/251‑1 (MQ=255) caTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTTCCGCGCCGATTATGGACGGCTcgcg > 2:260222/1‑251 (MQ=255) caTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTcgcg > 1:508434/1‑251 (MQ=255) cgcttttCGCGCCATTTGCGGTTGCATTAACAAAGTGCGCAATGAATAT‑CATGTCAATATGACCGATTCGCAGGTTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGGGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTa < 2:656271/247‑1 (MQ=255) ccctgttCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAAGAAAGACGTTGGGCAGGATTTTTCGCGCTGGAATGTCGGCTGGTTAACGTTGCGTGGTCCGTATGGTGCGCGCCGCACGTTGGAAAATCCTGCCGATCCCGAAAGTGCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTa < 1:594315/246‑1 (MQ=255) tttCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTgg > 1:335265/1‑251 (MQ=255) cgcCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGttt > 1:14871/1‑251 (MQ=255) cAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTg > 1:229176/1‑250 (MQ=255) atCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGatg > 1:52283/1‑198 (MQ=255) atCGGTGGCATTAACAAAGTGCGCAAGGAATAT‑CATGGCTATATGACTGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATGATGCGCGCTGGAATGACGTCTGGCTACCGTTGCGTGGTCAGTAGGGTGCGCGAAGCACGGTGCAAAACCCTGCCGATCCCGAAAGTTCGGTGagg < 2:52283/198‑3 (MQ=255) gTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTc < 1:381595/187‑1 (MQ=255) gTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTc > 2:381595/1‑187 (MQ=255) aaaaGTGCGAAAGGAATGT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCGGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTGGCAAACCCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAAcg < 2:590219/250‑1 (MQ=255) aaaGTGCGCAATGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCACACCGAAcgc > 2:121264/1‑251 (MQ=255) gctaTGAATAT‑CATGTCTATATGACCGATTCGGAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTGGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATg < 2:255465/248‑1 (MQ=255) aaTGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGc > 1:196753/1‑251 (MQ=255) aaTGAATAT‑CATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGc > 1:600317/1‑251 (MQ=255) aatcctgtctatctgctcgtttcgcAGGGTAAAGTATTGCTCGATTCGGAAAAGAATGCCGTTGGGAAGGTGTTTTCGCGCTGGAATGATGACTGTCTAACGGTGCGTGGTGAGTAGGGTGCTCGCAGCATGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGGAGGTTGCCGCGCCGATTATGGACGGGGCGCGGCTGATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGTCTCCGGt < 2:602867/229‑1 (MQ=255) cATGTCTATATGACTGATTCGCAGGTTAAAGTTTTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGTCGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCa < 2:14871/250‑1 (MQ=255) cGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTagcgagc > 1:183838/1‑251 (MQ=255) attcgcAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGCTGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGc > 2:82391/4‑191 (MQ=255) attcgcAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGc < 1:82391/188‑1 (MQ=255) agtcgcAGGGTAACGTATTGTGCGATGCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCTCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAAGCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGGAGCGAgcgg < 2:126663/248‑1 (MQ=255) gcAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAAGCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGaa < 1:620334/251‑1 (MQ=255) | TACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAT‑CATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGAA > NC_000913/4636760‑4637245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |