| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,631,146 | G→A | A138A (GCG→GCA) | slt → | soluble lytic murein transglycosylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,631,146 | 0 | G | A | 92.4% | 172.9 / ‑5.3 | 66 | A138A (GCG→GCA) | slt | soluble lytic murein transglycosylase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (32/29); minor base C (4/1); total (36/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGACTGAAGGATTATCCGCTTTATCCCTACCTGGAATACCGCCAGATCACCGATGATCTGATGAATCAACCGGCGGTGACGGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCGAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGCGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCA > NC_000913/4630904‑4631387 | ggACTGAAAGATTATCCACTTTATCCCTACCTGGAATACCGTCAGATCACCGATGACCTGATGAATCAACCGGCGGTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCCAAATggg > 1:603647/1‑249 (MQ=255) cTGAAAGATTATCCACTTTATCCCTACCTGGAATACCGTCAGATCACCGATGACCTGATGAATCAACCGGCGGTGACTGTCACTCACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGCACCGGCGCGGCGTGAAGACTGGCGTTGCTTGTTTACCTTTAGCCCGGGCAAGCCCGGGACCACCGCAGAGCA‑AT‑GTACTTACTAATATTCAAAACGGAacac > 2:651609/1‑251 (MQ=255) gaaagATTATCCACTTTATCCCTACCTGGAATCCCGTCAGATCACCGATGACCTTATGAATCAACCGGCGGTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTGCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCTGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACAcc < 1:471997/246‑1 (MQ=255) aaGGATTATCCCCCTTATCCCTGCCTGGAATTCCGTCAGATCCCCGATGATCTGATGAAGCAACCGGCGGTGACTGCCACTAACTTTGTTCGCTCTAACCCTACGCTTCCTCCCGCTCGCACGCTGCAATCTCGCTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTTGTCTTTAGCCCGGAAAAGCCAGGAACTGCCGAAGCGCA‑AT‑GTAATTACTACTATGCCAAATggtccaccgt < 2:1980/251‑9 (MQ=255) agagtctCCGCTGTATCTCTACCTGGAATACCGACATATCACCGATGACCTGATGAATCATTCGGCGGTGACTGGCACTAACCTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCATTCTCGTTTCGTCAAGGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGTCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGc < 2:181659/245‑1 (MQ=255) gATTATCCACTTTATCCCTACCTGGAATACCGTCAGATCACCGATGACCTGATGAATCAACCGGCGGTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTTACCTTTAGACCGGAAAAGACCGGGACTAACGAAGAGCACTT‑GTA‑TTAATACTATGCAAAAAGGAaccacgggc > 1:410801/1‑243 (MQ=255) tccacTTTATCCCTACCTGGAATACCGTCAGATCACCGATGACCTGATGAATCAACCGGCGGGGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGGAGTACAGAAGCGCA‑AT‑TTAATTACTACTATGCCAAATTGAACAACCGGCAGGGTg > 1:488034/5‑251 (MQ=255) ccTGGAATACCGTCAGATCACCGATGACCTGATGAATCAACCGGCGGTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑ATAATTACTACTATGCAAAATGGAACACCGGGCAGAGGGAAAAAACCTGGCa > 1:145881/1‑249 (MQ=255) ggAATACCGTCAGATCACCGATGACCTGATGAATCAACCGGCGGTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑gggg < 1:673734/251‑1 (MQ=255) aTACCGTCAGATCACCGATGACCTGATGAATCAACCGGCGGTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCg > 1:165437/1‑250 (MQ=255) atcaacgaagaccTGATGAATCAACCGGCGGTGACTGTCACTAACTGTGTTCGCGCTAACCCCACGCTGCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCtgtg < 2:488307/239‑1 (MQ=255) tCACCGATGACCTGATGAATCAACCGGCGGTTACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCACTCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGAGTGGCTTGTTTGTATTTAGCCCGGGAAAACCCGGGAATACCGAAACGCA‑ATTGCAAT‑AATAATATGCAAAAAGGAAAACCGGGCAGAGGGAAGAAACCCGGCAAAGGGGGGAAaggctgagg > 2:645864/1‑244 (MQ=255) atgacCTGATGAATCAACCGGCGGTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAAcc < 1:82426/251‑1 (MQ=255) gaccTGATGAATCAACCGGCTGTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCGTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGGGCTGTGGCTAACCg < 2:627631/247‑1 (MQ=255) accTGATGAATCAACCGGCGGTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GGAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAAACggg > 1:566074/3‑250 (MQ=255) aaTCAACCGGCGGTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAACCTTTAGCCCGGAAAAACCCGGGACTACCGAAGCGCA‑AT‑GTAATTACTACTATTCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCGGTGGCTAAACGGC‑AAGagccc > 1:368735/1‑250 (MQ=255) cAACCGGCGGTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGagccagcc < 1:532176/251‑1 (MQ=255) cggcggTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGGAAAACCCGGAACTACCGCAGCGCA‑AT‑GTAATTACTTATCTGCAAAATGGAACACCGGGCAGAGTGGAGAAGCCTGGGAA‑GGGGGGAAAGAGCTGTGGCTAACCGGC‑AAAAGGCAGCCTaa > 1:391693/1‑250 (MQ=255) cggcggTGACGGTCCCTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTTAAGACTGGCGTGGCTTGTTAGCCGTTAGCCCGGAAAAGCCCGGACCTACCGAAGCGCA‑AT‑GTAATTACTACTATGCATAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAAc < 1:267581/251‑1 (MQ=255) ggTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCGGCTCGCACGCTGCAATCTCGATTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTTGCCCGGAGAAACCCGGAAAAAACGAAGCGCA‑AT‑GTGATTACTACCATGCAACAAGGAAAAACAGGCAGAGGGAAGACAACTTGCAA‑GGGGCGAAAGAGCTAGGGCCCACCGGC‑CAGagccaggccagagcac > 2:122770/1‑241 (MQ=255) ggTGACTGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCCAAATGGAACACCGGGCAGAGTGGAGAAGCCTGGCAA‑GGGGCGGAAGAGCTGTGGCTTACCGGC‑AAGAGCCAGCCTAACGccc > 1:237614/1‑250 (MQ=255) gactgTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAAt < 2:532789/166‑1 (MQ=255) gactgTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAAt > 1:532789/5‑170 (MQ=255) gtcgcTAACTTTGTTCGCGTTAACCCCCCGCTTCCTCCCTCTCTCTCGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGTCGTGAAGACTGGCGTGGCTTGATAGTCTTTAGCCCTGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGTC‑AAGAGACCGCCTGACGTCTTTGACa < 2:122978/246‑1 (MQ=255) tCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACa > 1:220780/1‑249 (MQ=255) aCTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACGGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGtt < 2:603647/251‑1 (MQ=255) aaCTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTAtt < 1:489045/251‑1 (MQ=255) aaCTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTAt < 1:443889/250‑1 (MQ=255) tGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACCCCGGGCCGAGTGAAGAAGCCTGGGAA‑GGGGCGAAAGAGCTGGGGCTAACCGGC‑CAGAGCCAGCCTAACGCCTGTGACAAGTTATTTattg > 2:499833/1‑248 (MQ=255) cgcgCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTg < 1:29728/251‑1 (MQ=255) cgcTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTggg > 1:29197/1‑250 (MQ=255) cTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTa > 1:428555/1‑250 (MQ=255) cGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGGGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCt > 1:129965/1‑251 (MQ=255) cACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGCACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGCACACCGGGCCGAGTTAAGAAGCCTGGCAA‑GGGGCGAAAGAACTGTGGCTAACCGGC‑CAGAGCCAGCCTAACGCCTGTGACCAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTgg > 1:415633/1‑251 (MQ=255) tGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTTGGCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAAATACTACTATGCAAAATGGAACACCGGGCAAAGAGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGAGGCTAACCGGCCAAG‑GCCAGCCTAACGCCTTGGACAAGTTTTTTAGTGTCTGGCGTGGGGCCGGTAAAAAAAATACGCTGGCGTAt > 2:184589/1‑251 (MQ=255) aaagccagttgcGTCAAGGAACCGGCGCGGCGTGAAGACTGGCTGGGCTGGGTCGCCTTTAGCCCGTAAAAGCCCGGAACTACCGAAGCGCA‑ATTGTA‑TTCCTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑ACGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGAGTGCGTCAGGTAAACAAGATCCGCttgcttagtt < 2:223674/240‑10 (MQ=255) aTCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACCAGATCCGCTGGCGTAttt > 1:224920/1‑249 (MQ=255) gTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGAA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGGGTGAAAAAGGCTGGCAA‑GGGGAGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGGGACAAGTTATTTAGTGTCTGGAGTGCGTCAGGTCAACAAGATCCGCTGGCGTGTTTAAAGCGt > 1:403164/1‑251 (MQ=255) tCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGATAGCCTTTTGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCCAAATGGCACACCGGGCAGAGTGAAGAAGCCAGGCAA‑GGGGCGAAAGAGATGTGGCTAACCGGC‑AAGAGCCCGCCTAACGCCGGTGACCAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGt > 1:414283/1‑251 (MQ=255) cTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGa > 1:484003/1‑250 (MQ=255) cTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAACCCGGGACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGG‑CGAAAGAGCTGTGGCTAACCGGC‑AAGAGGCCGCCTAACGCCTGTGACCAGTTATTTTGTGTCTGGCGTGCGTCAGGGAAAAAAGATACGCTTGCGTATTTAGAGCGTGTCCGTCTTGCGATg > 1:397503/1‑251 (MQ=255) gcgcgcTGCGTGAAGACTGGCGTGGCTGGTTGGCCGTTAGCCCGGAAAAGCCCGGAAGTACCGAAGCGCA‑AT‑GGAATGTCTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGATCCAGCCTAGCGCCTGTGACAAGTTATTTAGTGTCTGGCGGGCGGCAGGTAAACAAGATCCGCTGTAGTATTTAGAGCGTATCCGTCTGGTGATg < 2:318062/249‑1 (MQ=255) gcgcGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGaa < 1:184589/251‑1 (MQ=255) ggcgTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCg < 1:499833/251‑1 (MQ=255) gAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GGAATTACTACTATGCAAAATGGAACACCGGGCAGAGAGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCCACCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGGAAACGGGTa > 1:74645/1‑250 (MQ=255) aGACTGGCGTGGCTTTTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGt < 2:279982/193‑1 (MQ=255) aGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGt > 1:279982/1‑193 (MQ=255) gACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAaca‑c < 1:569744/251‑1 (MQ=255) ggttgCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCCt < 2:224920/247‑1 (MQ=255) gCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCC‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCCTgga > 2:528498/1‑249 (MQ=255) tGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCCTGGTAAc < 1:533931/250‑1 (MQ=255) gCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTATGGCGTGCGTCAGGTAAACAAGATCCGATGGCGTATTTAGAACGAATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCATGGTAACAGGGCt > 2:316262/1‑251 (MQ=255) ttAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCCTGGTAACAGTGCTgg < 1:627777/249‑1 (MQ=255) cccGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTagag > 1:100392/1‑193 (MQ=255) cccGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAAAACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCGGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTagag < 2:100392/193‑1 (MQ=255) ccGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATGACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCCTGGTAACAGTGCTggcagggca < 1:430180/251‑1 (MQ=255) acgCCCGGAACTACCGAAGCGCA‑AT‑GTATTTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGACGCCTGGCAA‑GGGGCGAAAGAGCTGTAGCTAACCGGC‑AAGAGCACGCCTAACGCCTGTGCCAAGTTATTTAGTGTCTGGCGTCCGTCAGGTAAACAAGATCCGCTGGCGTATTTTGAGCGTATCCGTCTGGCGATGAAAGCGGGAAACA‑CTGCCCTGGATACAGTGCTggcagggcagtcgcc > 2:267762/3‑246 (MQ=255) aaGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCCTGGTAACAGTGCTGGCAGGGCAGAtgcc > 1:270930/1‑251 (MQ=255) aacccGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTCGTGTCAGGCATGCGTCAGGTAAACCAGATCCGCTGGCGTATTTCGAGCGTATCCGGCTGGCGATGAAAGCGGGTA‑CAGCTGGCCGTGTAACGTTGCTGGCAGGGCCGAtgcct > 2:243136/3‑251 (MQ=255) cccGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCCTGGTAACAGTGCTGGCAGGGCAGAtgcctgc < 1:59492/251‑1 (MQ=255) ccTACCGAACCGTA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCATAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCGAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTa < 2:559521/250‑1 (MQ=255) ccGAAGCGCA‑AT‑GTAATTACTACTAGGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAg < 1:651609/251‑1 (MQ=255) aGCGCA‑AT‑GTAATTACTACTCTGCAAAATGGAACACCGGGCAGAGTGAAGACGCCTAGCAA‑GAGGCGAAAGAGCTGAGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGCATGGCGTGCGTCAGGAAAACAAGATACGCTGGCGTATTTAGAGCGTAACCGTCTGGCGATAAAATCGGGTAACA‑CTGGCCTGGCAACAGTGCTGGCAGGGGAAGTGACTGCCGATTACCacacg > 2:206521/1‑246 (MQ=255) aGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACt > 1:512929/1‑250 (MQ=255) aGCGCA‑AT‑GTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTATGGCTAACCGGC‑AAGAGCACGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCCTGGTAACAGTGCTGGCAGGGAGGAGGCCTGCCGATTACCAGACtt > 2:86515/1‑250 (MQ=255) actaTGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCa < 1:287449/249‑1 (MQ=255) | GGACTGAAGGATTATCCGCTTTATCCCTACCTGGAATACCGCCAGATCACCGATGATCTGATGAATCAACCGGCGGTGACGGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCA‑AT‑GTAATTACTACTATGCGAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAA‑GGGGCGAAAGAGCTGTGGCTAACCGGC‑AAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGCGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACA‑CAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCA > NC_000913/4630904‑4631387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |