| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 6,850 | A→G | Y370Y (TAT→TAC) | yaaJ ← | putative transporter YaaJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 6,850 | 0 | A | G | 98.1% | 157.3 / ‑6.4 | 53 | Y370Y (TAT→TAC) | yaaJ | putative transporter YaaJ |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (32/19); total (32/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
GGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGGCTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACAAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGC > NC_000913/6608‑7080 | gggCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATATGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGGTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGGTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGt > 1:92124/1‑250 (MQ=255) tGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCCCATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGGAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGa > 1:496598/1‑250 (MQ=255) tGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAACCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGAACCGCAAACACCAGATCGCTTTAGGGGTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTgc > 1:538214/1‑249 (MQ=255) gCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTTTGATATCTGCCCGTTTCCACATCAGCGGAAGCCTTAACAAGGTGCCGCCGCTGCCCGTTGCGCAGGTGCAGATCCGCAAACACCAGATCCCTTTAGGGGTGTTTAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTgccgg > 1:398087/1‑247 (MQ=255) aTCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGaa < 1:99354/251‑1 (MQ=255) ccttGGCAATGGTAGGAACCACAGGAGAGAGCAGTAAAATGGCGGGCAAATTTGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAAGCAAACAGAATa < 2:109994/248‑1 (MQ=255) ggCAATGGTATGAACCACAGGCGATAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATTCAGGCCATTATGATATCTTCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTCCAGTCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTGGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAAc < 1:561601/249‑1 (MQ=255) aCCACAGGCGAGAGCAGGAAAATGGCGGACCAATTGGTAATAGCCATGCAGGCCATTATGATATCAGCCAGTTGCCACATAAGCGGAAGACTTAGCAAGGGGCCGCCGATGACCGTTGGGAAGGGGCAGGTCCGCAAAAACCAGATCGCTTTAGGGTTGTTCAGGCGTGAAAAGAAGAGATTGTTTTCGGCGTACATGTAGTTGGCAAA‑GCTGGAGCTGAAGGAAAAAAGCATAAACACGAGGGTAACaa > 2:109751/1‑250 (MQ=255) cacaGGCGAGATCAGTAAAATGGCGGTTAAAGTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGGTGCCACATCAGCGGAAGACTTAGCAAGGTGTCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTTGTTGGCAAC‑GATGGAGCTGAAGGCAAACATAATAACCACGAGGGTAACAAACt < 2:392602/251‑1 (MQ=255) acaGGAGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGGCATGCAGGCCAGTATGATATCTGCCAGTTGCCACAGCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTc < 2:39106/251‑1 (MQ=255) gagaGCAGTAAAATGGCGGGCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGAGGAAGACTTAGCAAGGGGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACCCCAGATCGCTTTAGGGGTGTTCAGGGGTAAAAAGAAGAGAATGTTTTCGGCGGAAATGTAGTTGGGAAC‑GATGGAGCTGAAGGCAAACAGAAAAACCCCGAGGGGAACAAAATCAGCaac > 2:474523/1‑249 (MQ=255) agCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCa < 1:306393/251‑1 (MQ=255) cAGTAAAATGGCGGACAAATTGGTAATAGACATGCAGGCCATTATGATATCTGCCAGTTGCAAAATCAGAGGAAGAATTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCCCAAACACCAGATCGCTTTAGGGATATTCAGGCGTAAAAAGAAAAGCATGTTTTCGGCGCGAATGTAGTTGGCAAA‑GAAGGAGCTGAAAGCAAACAAAATAACCACGAGGGTAACAAAcactgaacaccagg > 2:514613/1‑238 (MQ=255) gTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGaa < 1:585904/251‑1 (MQ=255) attgCGGTCAAAGTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTTCCGCCTATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑t < 1:652653/248‑1 (MQ=255) cccgatctatggggaaTAGCCATGCAGGCCATTATGATATCTGCCAGTGGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑aa < 2:157409/237‑2 (MQ=255) ggTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑aaca < 1:297440/251‑4 (MQ=255) ggTCAAATTGGTAATAGCCAAGCAGGCCATTAGGATATCTGCCAGTTGCCACAACAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑aaca < 2:60162/251‑4 (MQ=255) aaaTTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGACGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCg > 1:472681/1‑251 (MQ=255) aTTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑aa > 1:157409/1‑242 (MQ=255) gCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGCAGACTTGGCACGGTGCCGCCGGTGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AAAACCCGCATCGCCTTc > 2:532575/1‑249 (MQ=255) ccATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTgg > 1:556621/1‑251 (MQ=255) ccATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTgg > 1:410889/1‑251 (MQ=255) ccATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTgg < 1:410701/251‑1 (MQ=255) ccATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGACCCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTgg > 2:56726/1‑251 (MQ=255) cATGCAGGCCATTATGAGATCTGCCAGGTGCCACATCAGCGGAATACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGa < 2:62207/251‑1 (MQ=255) cATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGAt > 1:230314/1‑243 (MQ=255) cATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGAt < 2:230314/243‑1 (MQ=255) aTTATGATATCTGCCAGATGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGTAGGCAAACAGAATAGCCACGAGGGTAACCAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAAt > 2:560600/1‑251 (MQ=255) tATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATAc > 1:183429/1‑251 (MQ=255) cacaTCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGTAGGt > 1:38219/1‑251 (MQ=255) cacaTCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGAAGGt > 1:328806/1‑251 (MQ=255) aTCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGTAGGTtgt > 1:632483/1‑251 (MQ=255) aGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGACAAACAGAATAACCACGCGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGcctggagtgtgtgcc > 2:289806/1‑237 (MQ=255) aagacTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAATAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCa < 1:675854/168‑1 (MQ=255) aagacTTAGCAAGGTGCCGCCGATGACCGTTGAGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCa > 2:675854/5‑172 (MQ=255) taGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGACAACACCAGATAGAATTAGGGTTGGTGAGGCGTGAAAAGAAGAGAATGTTATAGGCGTAAATGTAGTGGGCAAC‑GCAGGAGCTGAAGACAAACAGAAGAACCACGAGGGAAATAAACACAGCACCCCAGGAACACA‑GT‑AGCACCACCATCGCCTTCTGGACAAGCTGAATCCCTAC‑CAGCGGCAGGTAGATTGGGCCGTTACCCGCCAgga > 2:265600/2‑248 (MQ=255) tGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGACTACCTTC‑CAGCGGCATGTGGGTTGTGCCGGTACCCGCCAGTAatacc > 2:284433/1‑249 (MQ=255) ttGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGcc > 1:55406/1‑251 (MQ=255) gCGAAGTTGCAGTCCCGCAAACCCCAGATTGTTTTGGGGTTGTCCGGGCAAAAAAAAAAGAGTTTGTTTGCGTCTTAAATGGAGTTGGCAAC‑GATGGAGCGGAGGCCAAAAAGAATACCCACGAGGGTAAAAAATTAAGCCCCCCAG‑ACCCCA‑TTTAACACCCGCTTCGCTTTTTGGAGAAGCTAATTCCCTTC‑CAGCGGCATTTGGGTTGTGCGGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGt < 1:316688/251‑1 (MQ=255) gAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTAc > 1:419498/1‑251 (MQ=255) cAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGAc > 1:578512/1‑251 (MQ=255) cAGATCCGCAAACACCAGATCGCTTTAGGGATGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAAACCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGTAGGTTCTGCCGTTACCCGCCAGGAATACCCGCATGgccacttccgtccagatgcc > 2:369636/1‑233 (MQ=255) aacccgaaacctccAGAGCGCTTTGGGTTTTTTCGGGCGTAAAAAGAAGATTTTGTTTGCGGCAAAAATGTGGGTGG‑ACCAGAGGGAGCGGAAGCCAAACATAACACCCGGGAGGGAAACAAACCCACCCCCCCAG‑AACCCAATA‑AACCCCCGCTTCGCCTTCTGGAAAAGCTAAAT‑CCTTCACAGCGGAATGTGGGTTGGCCCTTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCa < 1:166230/239‑1 (MQ=255) gCAAACACCAGATCTCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCGGCACCCCa < 1:59949/130‑1 (MQ=255) acacCAGATCGCTTTAGGGTTGTTCCGGCGTAAAAAGAAGAGATTGCTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACAcc > 2:277168/1‑142 (MQ=255) acacCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACAcc < 1:277168/142‑1 (MQ=255) aGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCa > 1:51919/1‑237 (MQ=255) cgttttAGGGTTGTGAAGGCAAAAAAAAAAGAGATTTTTTTCGGCGAAAATGTATTTGGAAAC‑AATGGACCTGAGGACAAACAAAAAAACCACGAGGTTAACAACCTCACCCCCCCAGGACCCAA‑TA‑ACCCCCCGCATCGCCTTCGGAATAAGCGAAATCCCTCC‑CAGGGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAAt < 1:474523/246‑1 (MQ=255) ttAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGTAGGTTGTGcc > 1:494045/1‑182 (MQ=255) gtAGGGTTGTTCATGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGATCCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGTAGGTTGTGcc < 2:494045/181‑1 (MQ=255) gTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCt > 1:426086/1‑251 (MQ=255) aagaagAGATAGTTTTCGGAGTAAATGTGGTTGGCAAC‑GATGGCGCTGAAGACAAACCGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AACACCCGCAACGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGCAGGCTGTGCAGTTACCCGCCAGTAAAACCAGCAGGGCGCTTTCGGTACAGATGCGCAGGGATTCGGTAAACATGCCACACATATGGCCCATCCCTTgccc > 2:423325/1‑249 (MQ=255) | GGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGGCTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAAC‑GATGGAGCTGAAGGCAAACAGAATAACCACAAGGGTAACAAACTCAGCACCCCAGGAACCCA‑TT‑AGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTC‑CAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGC > NC_000913/6608‑7080 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |