| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 6,595 | T→C | P455P (CCA→CCG) | yaaJ ← | putative transporter YaaJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 6,595 | 0 | T | C | 96.3% | 160.1 / ‑4.2 | 55 | P455P (CCA→CCG) | yaaJ | putative transporter YaaJ |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (26/26); total (27/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGGTCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAATGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGACCGATATCCGGATAACGCAAT‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGGCTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGA‑TCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGAT > NC_000913/6350‑6839 | tCATGGATCAACTGCGTGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGGTCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGAGCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGa < 2:281687/249‑1 (MQ=255) cATGGATCAACTGCTGGGAATTGTCTGACAGCTCCGGCAGCGTATAGCGCTTGGTGGGCAACGGGCTTTGGTAATCAAGCTTTTTCGCATGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGAta < 2:466424/250‑2 (MQ=255) aCTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGGTCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCggg > 1:182919/1‑251 (MQ=255) ggAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGGTCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGGGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGc > 1:62207/1‑251 (MQ=255) gAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGGTCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGcc > 1:39106/1‑251 (MQ=255) tCCGGCAGCGTATAGCGCGTGGTGGGCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAA‑GAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGAAAACACAAC‑GGCTCAAACACCGGGCGCCCGCCGAGTTTTAGCTGGCGt > 2:410701/1‑251 (MQ=255) ccGGCAGCGTATAGCGCGTGGTGGTCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGc < 1:134730/249‑1 (MQ=255) ggCAGCGTATAGCGCGTGGTGGTCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAg < 1:178665/251‑1 (MQ=255) ggCAGAGTATAGCGCGTGGTGGTCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGAGAACGCAAC‑GGATCAAACACGGGGCGCACGCCGAGTTTACGCTGGCGTAg < 1:184134/251‑1 (MQ=255) acgtgtaggtcgTGGTGGGCAACGAGTATTGGTAATCAAGCTTTTTCGCAGGTGAAATAAGAAGCATCATAGCCAGTTCTTGCAGGAAATCTATGCCGACTTTTGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGCAACATCAACCCACGCGTACGGAGAAAGCTGGAGGCCGATATCCGGATAATGCAAC‑GGACCAAACACTGGGCGCACGCCGAGTTTACGCTTGCGTAGATaa < 2:291768/241‑1 (MQ=255) aGCGCGTGGTGGTCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTg > 1:392602/1‑251 (MQ=255) gtggtgGTCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAAt > 1:570812/1‑251 (MQ=255) cAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGa > 1:386116/1‑250 (MQ=255) ggTAATCAAGCGTTTTCGCAGGGGAACTAAGAATCAGCATATCCAGTCCTTGCAGGCAATTTATGCCGACTTTAGCAAAAAAAGCGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATACCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAGCACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCTATGGCAATGGTATGAACAACAggag > 2:316688/1‑247 (MQ=255) aaTCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATTAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGc < 1:174764/251‑1 (MQ=255) ttCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATgg < 1:44535/250‑1 (MQ=255) gaggggAAATAAGAGTCAGCATAACCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAACAAAAGAGAATGCGTTGATAGCTAGCTGTGATTACTCATGCGAAACATCATCCCACGCGTCCGGGGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACGGGGCGCAAGCCGAGTTGACGCTGGCGTAGATAATCACAGGCCATGGGATGAACCACAGGAGAGAACAGTAAAATGGCGGTc > 2:561601/6‑251 (MQ=255) atatCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGCGCGCAGTAAAATGGCGGTAAAATTGGAAATAGCCATGc > 1:465697/1‑250 (MQ=255) gTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAACAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTAGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGGCAACATGGTGAGAGTCAAGCAGGCCAtt > 2:182574/1‑251 (MQ=255) gTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCAtt < 1:676507/251‑1 (MQ=255) gTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGGTATTACTCCTGCGAAACACCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCAtt < 2:386116/251‑1 (MQ=255) ttGCAGGAAATTTATGCCGACTTTAGCAACAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCCTTATg > 1:506470/1‑250 (MQ=255) aaTTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGcc > 1:680376/1‑251 (MQ=255) aacAAAAAAAGAGAATGAGTTGATCGAGAGTTGTGATGAACCCTGCGAAACAGCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCg < 2:463931/249‑1 (MQ=255) aaaaacagagaatgagTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGa > 1:130623/8‑250 (MQ=255) agagaatgcgTTTATAGATAGTTGTGATTAATCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCAAATATCCGGAAAACGCCAC‑TGATCAAACCCCGGACGCACGCCGAGTTTACGCTGGCGGAGATAATCACTAGCAATAGGATGAACCACAGGCGAGAGCCGGAAAATGGCGGACACAATGGTAATAACCATCCAGCCCATTATGATATCTACCaagtcgtccctccacggaagtctt > 2:418313/2‑227 (MQ=255) gTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTgc > 1:60162/1‑251 (MQ=255) tGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTgcc < 2:680376/250‑1 (MQ=255) tAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGATGCCGCCGATg > 1:189973/1‑250 (MQ=255) gTTGTGATTCCTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGAcc < 2:182919/251‑1 (MQ=255) gTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGAcc < 1:214282/251‑1 (MQ=255) ccacattcGAAACATCACCCCCCGCGTCCGGATAAAGCTGGCGGTCGATACCCGTATACCGCAAC‑GGAACAAACACGGGGCGCACGCCGCGTTTACGCTGGCGTAGATAATCTCTGGCTATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGTTAAGAGCCAGGCAGGCCATGATTATATCTTCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTCGCGaa < 2:506470/243‑1 (MQ=255) aCTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGACCGATATCCGGATAACGCAAT‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCCCATCAGCGGAAGGCTTAGCAAGGTGCCGCCGATGACCGTTGCGa > 1:498801/1‑249 (MQ=255) tGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGACAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGAAAAATTGGTAATAGCCAAGCAGGCCATTATGATATCTGCCAGTTGCCACAACAACGGGAGTCTTAGGAAGGGGACGCCGATGGCCGTTGCGGAggcgcc > 1:11563/1‑247 (MQ=255) aaaCATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAAAAACCATGAAGGCCATTATTATATCTGCCAGTTGCCACAACAGCGGGAGACTTAGAAAGGTGCCGCAGCTGACCGTTGCGCAgggggggaa > 2:612871/1‑243 (MQ=255) catcatCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATTTGCCAGTTGCCACATCAGACGAAGACTTAGCAAGGTGCCGCCGATGACCGTTTCGAAGGGGCAGA‑TCCGc > 1:214076/1‑251 (MQ=255) atcaccCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGA‑TCCGCa < 1:347417/251‑1 (MQ=255) cACGCGTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGGTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGA‑TCCGCAAACACCa < 1:418313/251‑1 (MQ=255) cgTCCGAAGAAAGCTGGCGGCCGAATTCCGGATAACG‑AATCGGATCAAACACCGGTCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAAGGGTATGAACCTCAGTCGAGAGCAGTAAAATGTCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGACGCCGATGACCGTTGCGAAGGTGCAGT‑TCCGCAAACACCAGATc < 2:615531/251‑1 (MQ=255) gTCCGGAGAAAGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCCTTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCCAGGTGCCGCCGATGACCGTTGCGAAGGGGCAGA‑TCCGCAAACAcc > 1:89096/1‑245 (MQ=255) aaaGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCTCACGCAGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGA‑TCCGCAAACACCAGATCGCGTTAggg < 2:569042/251‑1 (MQ=255) aGCTGGCGGCCGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGA‑TCCGCAAACACCAGATCGCTTTAGGgtt < 1:333223/251‑1 (MQ=255) gtgtgcgttatCCGGATAACGAAAA‑TGATCAAACACCGGGGGCTCGCCGAGTTTACGCTGGCGTAGATAATCATTGGAAAGGTTATGAACCACAGGTGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGCCTTAGCAAGGTGCCGGCGATGACCGTTGCGAAGTTGCAGA‑TCCGCAAACACCAGATCGCTTTAGGTTTGTTCa < 2:443623/243‑1 (MQ=255) gccGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCgggag > 2:332773/2‑171 (MQ=255) gccGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAg < 1:332773/173‑1 (MQ=255) ccGATATCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCCAATTGGTAATAACCCTGCAGGCCAATATTATATCTGCCAGTTGCCAACTACGCGGGAGACTTAGACAGGTGCCGCCCATGAACGTTGCGAAGGGGGAGA‑GCCGCCAACAACAGACCGACTTAGGGGTGTTCAGGCg > 2:32345/1‑251 (MQ=255) tatCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGtt > 1:538185/1‑153 (MQ=255) tatCCGGATAACGCAAC‑GGAGCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCTAGtt < 2:538185/153‑1 (MQ=255) atCCGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGAc < 1:21308/192‑1 (MQ=255) ccGGATAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGGCATTATGATATCTGCCAGTTGCCACATCAGCAGAAGACTTAGCCAGGTGCCGCCGATGACCGTTGCGAAGGGGCAGA‑TACGCAAACACCACATCGCCTTAGGggtgttttggcgtgcaaa > 2:306393/1‑238 (MQ=255) ggATAACGCAAC‑GTATCGAACCCCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGATCCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATCGCCATGCAGGGCATTAAGATATCTGCCAGGTGCCACAGAAGCGGGAGACTTAGCAAGGGTCCGCCGGTGGCCGTTGCGTCGGCGCCGAACCCGCAA‑CACCAGGTCAGTTTAGGGTTGTTCGGGCggaactaga > 2:91786/1‑242 (MQ=255) aaaaggCAAC‑GGAGCAAACCCCGGGGGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAAACACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAATACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGA‑TCCGCAAACACCAGATCTCTTGAGGGTTGTGCAGGCGTAAAAagaaga < 2:80741/246‑1 (MQ=255) aTAACGCAAC‑GGATCAAACCCCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGA‑TCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAagaaga < 1:501103/251‑1 (MQ=255) aTAACGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGA‑TCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAagaaga < 1:248842/251‑1 (MQ=255) aCGCAAC‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGA‑TCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGAt < 1:612871/251‑1 (MQ=255) | TCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGGTCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAATGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGACCGATATCCGGATAACGCAAT‑GGATCAAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAATGGTATGAACCACAGGCGAGAGCAGTAAAATGGCGGTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGGCTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGA‑TCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGAT > NC_000913/6350‑6839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |