| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 6,349 | C→T | E37E (GAG→GAA) | yaaA ← | DNA binding and peroxide stress response protein YaaA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 6,349 | 0 | C | T | 96.8% | 176.0 / ‑2.5 | 63 | E37E (GAG→GAA) | yaaA | DNA binding and peroxide stress response protein YaaA |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (30/31); total (31/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.59e-01 | |||||||||||
GCCATACAAGCCGGAAAGCATTCGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCGCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCCTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAATGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGACCGATATCCG > NC_000913/6112‑6584 | cctcaacccccctcttccattctgCAAATGTTGTTGGGCAAAACCAAAACCGTCTTCGCTGAAGGTTTCGGC‑TGCCAAGCCGTTGTAGACATCACCTTAAACCGCCAGAATCGCCTGGCGGGAATTCCCCGGCGTAAAATTTGGCT‑GCCAGTCATAAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAAct < 2:386061/228‑1 (MQ=255) cATACAAGCCGGAAAGCATTCGCAAATGCTGTTGGGAAAAATCGAAATCGTCTCCGCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAActgc < 1:659388/251‑1 (MQ=255) aTACAAGCCGGAAAGCATTCGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAActgct > 1:153083/1‑251 (MQ=255) cGGAAAGCATTCGCAAATGATGTTGGGCAAAATCGAAATCGTCTTAGCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCCGTCATGAAGGAGAACGGCGTTGATACCCGCCAATTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAAGTTCCGCGCTTCATGGATAAACGTCTGGGAATTg > 2:676507/1‑251 (MQ=255) aaaGCATTCGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTGTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCt < 1:166533/251‑1 (MQ=255) aaGCATTCGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCt > 1:615531/1‑250 (MQ=255) aGCATTCGCAACTGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGC‑AAGCCAGTGTAGACATCACCTTTAAACGCAAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGGTTACGCGCTTCATGGATCAACTGCTGGGAATTGTCTa > 1:372901/1‑250 (MQ=255) aTTCGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCAATCGCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCCTCATGGATCAACTGCTGGGAATTGTCTAAc > 1:631213/1‑249 (MQ=255) agCAAATGCTGTTAGGCAAAATGGAAATAGTCTTCGCTGAAGGTCTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGACAAAATCGCATGGCGGGCATTCTACGGCGTGACATATGGCT‑GCAAGTCATGAAAGAGAGGGACGTTGATACCCACAATATTGACGCTGATGCGGAACAACGTGCATATATGAGGAGGAGTCGGGTTACTCGCTTCATGGCACAACGGCTGGGAATGTTCTAACAGCTc > 2:652653/2‑251 (MQ=255) gCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAAct > 1:386061/1‑228 (MQ=255) gCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTcc > 1:396470/1‑251 (MQ=255) tGCTGTTGGGCAAAATCGAACTCGTCTTCGCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGACAGCGAGCGGCGTTGATACCCGCCAGTTTTTCGCTGATGCGCATCCGAGTGCTACACTGCGGAGGCGTAAGTTTCAGCGCTTCCTGGATCAACTGATGGGAATTGTTTACCAGCTCCGGccg > 2:634000/1‑249 (MQ=255) cAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAgcgc > 1:466424/1‑251 (MQ=255) aaaaTCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGcgcg > 1:494217/1‑251 (MQ=255) ccgaaatcgTCTCAGCTGAAGGTTCCGGCCTGA‑AAGCCGGTGTAGACATCACTTTTAAACGCCAGAATCGCCTGGCGGGCATTCGCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCgtggt < 1:664721/250‑1 (MQ=255) aaatcgTCGTCACTGAAGGTTTCGGACTGC‑AAGCCGGTGTAGACATCACCTTTAACCGCCAGAATCGCCTGGCGGGGATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGGGCGGCGTTGATACCCGCCAGTTTGGCGCTGATGCGCATCAGCGTGCTAATATGCGGAGGCGTGAGTTTCCGAGCTTCAAGGATCAAATGAGGGGCATTATCTGACAGCTCGGGCAGCGTAAAGCGCGtggtggg > 2:333223/1‑250 (MQ=255) tCGCGGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGCCCTCACCTTTAAACGCCAGAATCGCCTGGCGGCCATTCTCCGGCGTGAAATCGGGCT‑GCAAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACgg < 1:373925/248‑1 (MQ=255) gCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCttt > 1:434204/1‑251 (MQ=255) atggTTGCGGCCTGC‑AAGCCGTCGGAGAAACCCCCTTAAAACGCCAGAATTGCGTGCCGGGCACTCGCCGGCGATAAGTATGGCT‑GCATGTCATGAAAGCGAGTGTGGTTGATCCCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCCTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGGGGTGG‑TCAACGTGCTTTGGTa < 2:631213/249‑1 (MQ=255) tttCGGCCTGC‑AGGCCGGTGGAGACATCACCTTTAAACGCAAGAACCGCCTGGCGGGCATGCTCCGGCGTGAAATCGGGCT‑GCCGGTCATGAAAGCGAGGGGGGTTGATCCCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATGGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATc < 1:305372/250‑1 (MQ=255) cggctggaaaGCCGGTGTAGACATCACCTTAAAACGCCATAAGCCTCTGGCGGGCATTCTCCGGTGTGAAATCTGGCT‑GCCCGTCATGAAAGCGGGCGGGGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGc < 1:126040/243‑1 (MQ=255) ccGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAgg > 1:109737/1‑251 (MQ=255) ccgggCGGGCATTCTCTGGCGGTAAATCTGGCT‑GCCAGTCAGGAAAGCGAGCGGTGTTGATACCCGCCAGTTTGGCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAgg < 1:634000/248‑1 (MQ=255) ggCGGGCATTCGCCGGCGTGAAGTC‑GGCTCGCCAGTCATGAAAGCGGGGGGCGTTTACACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCCGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGa < 1:263979/249‑1 (MQ=255) gggtgctttccccGGCGTGAAATCTGGCT‑GCCAGCCAGAAAACCGAGCGGGTTTAATCCCCGCCAGGTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGaaaa < 2:294486/240‑2 (MQ=255) gggCATTCCCCGGCGGAAAATCTGGCT‑GCCAGTTATAAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAAttt < 1:518608/251‑1 (MQ=255) ttctccGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGT‑TCAACGGGATTTGGTAATCAAGCGATTTCGCAGGTGAATTAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGcc > 2:652747/5‑251 (MQ=255) gggaatattgggtggcaggTCAGGAAGGCGAGAGGTGTTGATCCCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAg < 2:153083/233‑1 (MQ=255) gTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGaa > 1:298576/1‑208 (MQ=255) gTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGc > 1:452925/1‑251 (MQ=255) tGAAATCAGGCT‑GCCAGACATGAAAGCGAGCGGCGTTGATACCCGCCAGATTGTCGCTGCTGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGATGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGGTTTCGCAGGTGAAATAAGAATCAGCCTATCCAGTCCTTGCAGGAAATTAATGCGGACTTTAGc > 2:585904/1‑250 (MQ=255) aatgctggtggccagctaTGAAAGCGAGGGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGGCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCaaa < 1:674339/234‑1 (MQ=255) t‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCAGATGCGCATAAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑GCAACGGGCCTTGGTAATCAAGCGTTTGAGCAGGTGAAATAAGAATCAGCATATCCAGACCTTGCAGGAAATTTATGCCGACTTTAGCAGAAaaagaga > 2:297440/1‑250 (MQ=255) aaTGAAAGCGAGCGGCGTGGATCCCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGtt < 1:469112/249‑1 (MQ=255) aaaGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGAGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCg > 1:334178/1‑251 (MQ=255) agcgagcgGCGTTGATCCCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGAt < 1:144626/251‑1 (MQ=255) gagcgGCGTTGATAAACGCCAGTTTGTAGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCAAGTCCTTGCAGGAAATTTATGCCGCCTTTAGCAAAAAAAGAGAATGAGTTGATCGaacgt > 2:609270/1‑247 (MQ=255) gcgggttttatccccGCCAGGTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTTCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTtg < 2:434204/239‑1 (MQ=255) ggcgTTGATCCCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTtgtg < 1:454508/251‑1 (MQ=255) ggcgTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTtgtg > 1:395495/1‑251 (MQ=255) ggttgacccccGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGAt < 1:609999/243‑1 (MQ=255) tGATCCCCGCCAGGTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTGCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTa < 1:465499/250‑1 (MQ=255) cGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGTAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACgg > 2:15309/1‑126 (MQ=255) cGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACgg < 1:15309/126‑1 (MQ=255) cGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCg < 1:385562/251‑1 (MQ=255) gTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAAc > 1:569042/1‑250 (MQ=255) tttGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCTTATAGCGCGTGGTGG‑TCAACGGGCTTTGTTAATCACGCGTTTTCGAAGGTGAAATAAGAATCAGCATGTCCAGTCCTTGCAGGAAATTTATGCCGACTTTAACAAAACAAGAGAATGAGTTGATCGATAATTGTGATTACTCCTGCGAAAca > 2:26317/1‑250 (MQ=255) gtgttgcttaTGCTCATCAGCGTGGTAATCTGCGGAGGCGTCAGTCTCCGCGCTTTATGGAACAACGGGTGTGAATTGTCGAACAGCTCCGGCAGCGTATAGCGCG‑GGTGGGTCAACGGGCTTTGGTAATCAAGCGTTTGCGCATGTTAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGGCTTTAGCAAAAAAAGAGAATGAGTTTTTCGATAGTTGTTATTACTCCTgttgaacat < 2:620178/241‑9 (MQ=255) gTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAAcatcat > 2:214282/1‑251 (MQ=255) gTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAAcatcat < 1:345334/251‑1 (MQ=255) gCTGAGGCGCATCAGCGTGCTAAGCTGTGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTAGAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATTAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATccc < 2:580282/251‑1 (MQ=255) aTGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATACACAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCAcgc > 1:583284/1‑251 (MQ=255) cATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGTGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCGTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCg < 1:609270/251‑1 (MQ=255) aTCAGCGTGCCAATCTGCGGAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCgg > 1:109994/1‑251 (MQ=255) cAGCGTGCTAATCATCGGAGTCGTCAGTTTCCGCGTTTCAGGGATCAACTGCTGGGATTTGTCTAACAGCTCCGGCCTCTTATAGCGCGTGGTGG‑GCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATTACCAGTCCTTGCATGAAATTTATGCCGACTTTTGCAAAAAAAGATAATTAGTTGCTCGATAGTTGTTATTATTTCGGTGAAACATCATCCCACGCGTCCGgag < 2:445188/251‑1 (MQ=255) ggCTAATCTGCGGAGGCGTCAGTTTCCGCGCTTCAAGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGc < 1:26317/250‑1 (MQ=255) gAGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTACTCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGat > 1:281687/1‑250 (MQ=255) aGGCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGTGCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATAGCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCTAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGatat < 2:494217/251‑1 (MQ=255) ggCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATc < 1:652747/251‑1 (MQ=255) gCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGCTAGTTGTGATTACTCCTGCGAAACCTCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATcc > 2:596861/1‑251 (MQ=255) gCGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGAGCGATAGTTGTGATTACTCCTTCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATcc < 2:566070/251‑1 (MQ=255) cGTCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAAAGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGGCCGATATCCg > 1:80741/1‑251 (MQ=255) tCAGTTTCCGCGCTTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGc < 1:139123/160‑1 (MQ=255) | GCCATACAAGCCGGAAAGCATTCGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGC‑AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCGCCGGCGTGAAATCTGGCT‑GCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCCTCATGGATCAACTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGG‑TCAACGGGCTTTGGTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATTTATGCCGACTTTAGCAAAAAATGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGAAACATCATCCCACGCGTCCGGAGAAAGCTGGCGACCGATATCCG > NC_000913/6112‑6584 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |