| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,626,521 | T→C | L204L (TTG→CTG) | radA → | DNA recombination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,626,521 | 0 | T | C | 98.7% | 227.2 / ‑4.7 | 75 | L204L (TTG→CTG) | radA | DNA recombination protein |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (27/46); total (29/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.36e-01 | |||||||||||
GCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGTAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATTTGACACGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGC‑TGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCA > NC_000913/4626274‑4626752 | gcaaaTGAAAACGCTGTATGTCCCCGGCGAAGAGTCGCTGCAACAGGTGGCAAGGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGa < 2:275106/247‑1 (MQ=255) gATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGacgc > 1:406871/1‑249 (MQ=255) attccACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAAcg < 2:253632/247‑1 (MQ=255) aTGTCACCGTCGACGAGTCGCTGCAACAGGTAGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGAATGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGCCTCGATCCAGGTGATGCATATGGCGGCTGTAACGTCATCGCCTGGACGCGTGGCGCAGGTGCGTGAAACGGGGGCTTATCTGAC‑GGCGTTCGCCAAAAcc > 2:431334/1‑250 (MQ=255) aTGTCACCGGAGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGCCAATCTCAATATGTTGTCGGAAACCAGCCTCGAACAGCTATGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGAGATGCATATAGCGGATGGACAATCTACACACGAGAGCGTGGCGCAGGTGCGTGAAACAGCGGGTTATTTGAACCGC‑TTTGCCaacaac > 2:607631/1‑247 (MQ=255) tCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGAGATGCATATGGCGGAAGTACAGGCATCGCCAGGCAGCATGGCGCCGGGGCGTGAAACGGCGGCTTATCTGAAGCGC‑TTAGCCCAAAagcgc > 2:560386/1‑251 (MQ=255) cACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAAcgcgc < 2:104884/250‑1 (MQ=255) cGGCGACGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGgtg < 2:149632/251‑1 (MQ=255) cGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGACTGCCGACTGACAATCTCAATATGTTGTCTGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGgtg < 1:396613/251‑1 (MQ=255) cGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTgg < 1:147855/251‑1 (MQ=255) aaGAGTCGCTGCAACAGGTTGCTATTCGCGCTCATCGCTTTGGCCTGCCGACTGACAATCTCAAGATGTTGTCGGAAACCAGCATCGAGCAGAGCTGCCTGATTGGCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCg < 2:406088/251‑1 (MQ=255) agagTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGa < 1:565282/251‑1 (MQ=255) cTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCCGGGGCGTGAAACGGCGGCTTATCTGCCGCGC‑TTCGCCAAAACGCGCGGTGTGGCGGTTGT‑CAt > 1:418580/1‑251 (MQ=255) tGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGGAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCGTCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGGCGCGC‑TTCGCCACAACTCGCGGTGTGGCGATTGG‑CAtg > 1:117198/1‑251 (MQ=255) aaCAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGGCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CAtggtt < 2:663535/251‑2 (MQ=255) aCAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CAtggttg < 1:196819/251‑3 (MQ=255) gggggCAATGCGCGCTAATCGCCGTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGAGCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACGCGATCCAGGTGATGCATTTGGCGGATGTACAGTCATCGACTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTAGCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGTCGATTGT‑CAtgtttggac < 2:357696/248‑8 (MQ=255) ggTGGCAAAGCGCGCTCAACTCCTTGGCCTGCCGACGGCAAATCGCAATAGGTTGTCGGAAACCAGCATCGAGCAGAGCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CAtggttggac < 2:184053/251‑6 (MQ=255) gTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGac < 1:565705/206‑1 (MQ=255) gCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGt < 1:557203/251‑1 (MQ=255) aaTGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTaa < 1:363720/251‑1 (MQ=255) aaTGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTa > 1:198512/1‑250 (MQ=255) gcgcTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGAGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGGGGCGGTTGT‑CAtggttggaaccgtaaccaa > 1:351375/1‑235 (MQ=255) aTCGCCTTGGCCTGCAGACTGACAATCTTAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCTTGATTGCCGAAGAAGAGCAACTGAAGCTGATGGTAATTGACTCGATCCAGGTGATTCATATGGCTGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGTTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATggc < 1:606464/251‑2 (MQ=255) tCGCCATGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATAAGGCGGATGTTCAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGGTTATATGCCGCGC‑ATCGCCAAAACGCCCGGGGCGGGGATTGT‑CAtgggtgggaacgaaacaaaaaaagggc > 2:580576/1‑227 (MQ=255) gCCTTCCGACTGATAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCGGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGCTCCAGGTGATGCATATGGCGGATTTACAGTCATCGCCTGGCAGCGTGGCGGAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAATATGGCTCgctggca < 2:308959/251‑2 (MQ=255) ccTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCgctggcgg < 1:360040/251‑3 (MQ=255) tgcagACTAACAAGCTCAATATGTTGTCGGATACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGACGAGCAAACGAAGATGATGGAAATTGACTCGATCCAGGTGATGCATATGGGGGATGTACAGTCATCGCCTGGCAGCGTGGCGCTGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGATGGGGCGATTGT‑CCTAGTTGGACCCGTAACCAACGATGGGtggctggcgggg > 2:355585/5‑247 (MQ=255) ccGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGccc > 1:558923/1‑251 (MQ=255) gACAATCTCAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAAACAAAGATGGCTCGCTGGC‑GGGCCCTAAAGt > 1:476342/1‑251 (MQ=255) cAATATGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTg < 1:492655/247‑1 (MQ=255) atGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACt < 1:431334/250‑1 (MQ=255) atGTTGTCGGAAACCAGCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGGGCTGGAACCCTg > 1:578348/1‑251 (MQ=255) gttgtCTGAAACCAGCATCGAGCAGATCTGCCGGATGGCCGAAGAAGAGCATCCGAAGCGGATGTGAATTGACTCGAGCCAGGTGATGCATATGGCGGATGTACAGGTATCGCCTGGCATCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGATGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTa < 2:328378/251‑1 (MQ=255) ggAAACCAGCATCGAGCAGATATGCATGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGGGGCGCAAGGGCGTGAAACAGCGGCATATCTGACGCGC‑TTCGCCAAAACGCGCGGGGGGGCGATTGT‑CAAGGGTGGGCACGTAAACAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGAc > 1:365655/1‑250 (MQ=255) gCATCGAGCAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTg < 1:105339/251‑1 (MQ=255) gagcAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCAGATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCtttt < 1:26883/248‑1 (MQ=255) gCCTGATTGCCGAAGAAGAGCAACCGATGCTGATAGTATTTGTCTAGATTCTGTTGCTGCATATGGCGTATGGTCAGTCTGCGCCTGGCAGCGTTGCGCCGGTGCGTGTAACGGCGTCTTATCTGACTCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTATCCAAAGATGGTTCGCTGGC‑GGGGTATGAAGTGCTGGAACACTGTATCTACTGTTCGGTGCttttttctga < 2:95665/247‑7 (MQ=255) gCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGGGATGCATATGGCGGATGTACAGGCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGc < 2:371001/248‑1 (MQ=255) tGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGAGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCCGGAACACTGTATCGCCTGTTCCGTGCTTTTGGATGGCGATGcc > 1:285309/1‑251 (MQ=255) gaagaaGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCg > 1:286672/1‑251 (MQ=255) agaagaTCAGCCGAAGTTGGTGGTAATTGACTCGTGGCAGGTGATGCATATGGCGTATGTACTGGCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAACCGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGta < 2:223582/251‑2 (MQ=255) agaagaGCAGCCGAAGCTGTTGGTAATTGACGCGTTCCAGGTTAGGCATATGGCGGAGGTCTAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGTCGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCGCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGGTCGGTGCTTTTGGATGGCGATGCCGTCTCCCGtt < 2:6351/251‑1 (MQ=255) agagTAACCGAAGCGGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATTTTCAGTCAGCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGTCGCGC‑GTCGCCAAAACGCGCGGTGTGGCTATTGG‑CATGGTTGGACACGTAACCAAATATGGCTCGCTGGC‑GGGCACTAAAGTGCGGGAACACTGTACCGACTGTGCGGTGCTGTTGGATGGCGACGCTGACTCCAGTTTTc < 2:388471/251‑1 (MQ=255) aaCCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCAct < 1:214730/251‑2 (MQ=255) cGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAATATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCActtta < 1:394882/251‑5 (MQ=255) gAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCActttac < 1:633276/251‑6 (MQ=255) gATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGc < 1:505656/250‑1 (MQ=255) gggtaatggacgtgATCCAGGTGATGCATATGGCGGAGGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGGGTGAAACGGTGGCTTATCTGACGCGC‑TACGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCGGTC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCAt < 2:155283/238‑1 (MQ=255) aatggatgcgagccAGGTGATGCAAATGGCGGATGGACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCGGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGTCTCCCGTTTTCGCACGTTAGGCAGCCATaaaa < 2:32440/239‑1 (MQ=255) aTTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATaaaaa < 1:509558/251‑1 (MQ=255) aTTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAAAACTGTATCGACTGTTCGGGGCTTTTGGATGGCGGTGCCGACTCCCGTTTTCGCACTTTACGCAGCCATaaaa > 1:508403/1‑250 (MQ=255) tGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAAc < 1:277807/250‑1 (MQ=255) ccGATCCGGGTGATGCAAATGGCTGATTTACAGTCATCGCCGGGCGGCGTGGCGCAGGTGCGTGAAACGGCGGTTTATCTGACGCGT‑GTCGTCAAAACGCGCGGTGTGGCGATTTG‑CATGGTTGGACACGTAACCAAAGCTGGTCGGCGGGCGTGGTC‑TAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCtt < 2:376233/250‑1 (MQ=255) cAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACCCTGTATCGACTGTTCGGGGCTTTTGGATGGCGGTGCCGACTCCCGTTTTCGCACTTTACGCCGCCCTAAAAACCGCTTCGgcgg > 1:10935/1‑250 (MQ=255) gggaggCATATGGTGTATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAACCGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGG‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGGGCGGGAACACTGTATCGACTGTTCGGGGCTTTTGGATGGCGATGCCGACTCCCGTGTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGt < 2:654811/246‑1 (MQ=255) tGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTTTCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CCTGGTTGGACACGTAACCCAAGATGGCTCGCTTGC‑GGGCCCTAAAGTGCTGGAACACAGTATTCACTGTTCGGGGCTTTTGGATGGCGATGCCGCCTCCCGTTTTCGCACTTTTCGCCGCAATTAAAACCGCTTctgcacgggg > 2:99834/1‑242 (MQ=255) gATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTg < 1:202487/250‑1 (MQ=255) gATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGa < 1:6086/251‑1 (MQ=255) atatGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGAAACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGTCTGTTCGGTGCTTTTGGATGGCGATGCCGAATCCCGTTTTTGCACTTTAAGCAGCCCTAAAAAACGCTTCGGCGAGGTGAATg > 1:300109/1‑249 (MQ=255) gCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGCTGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGCAAACTGTATCGGCTGTTCGGTGCTTTTGGATGGCGCTGCCGACTCCCGTTTTCGCACTTTACGCAGGCATAAAAAACGCTTCGGCGCGGTGAATGAGCTggg > 1:410471/1‑251 (MQ=255) cGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACTGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATTGCTCgctggc < 2:446261/130‑1 (MQ=255) cGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCCAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCgctggc > 1:446261/1‑130 (MQ=255) aTGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTc > 1:72568/1‑251 (MQ=255) aTGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGGGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTc > 1:527580/1‑251 (MQ=255) tACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTc > 1:492594/1‑251 (MQ=255) aCAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTc < 1:119060/250‑1 (MQ=255) cGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGCTGCCGACTCCCGTTTTCGCACTTTACGCCGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGAcc > 1:221082/1‑251 (MQ=255) gCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTTGACACGTAACCAAAGATAGCTCGCTGGC‑GGGACCTAAAGTGCTGGAACACTGTATCGGATGTTCGGTGCTTTTGGAAGGCGCGGCCGCCTCCCGTTTTCGCCCTTTAAGCCGCCATAAAAACCGCTTCGGCGCGGGGCAAGGGCTGGGCGTCTTcactagtaccc > 2:458050/1‑241 (MQ=255) gCCTGGCAGCGGGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGA‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGGACACTGGATCGACTGTTCGGTGGTTTTGGATGGCGATGCCGACCCCCGTTTTCGCCCTTTACCCCGCAAAAAAAACACCTTCGGCGCGGTGAATGAGCAGGGCGTCTTccgcatggccc > 2:348741/1‑241 (MQ=255) ccTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGGGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGGGCTGGGACACTGTATCGACTGGTCGGGGCTTTTGGATGGCAATGCCGACTCCCGTTTTCGCACTTTACGCAACCATAAAAACCGCTTCGGCGCGGGGGATGAGGTGGGCGTCTTCGCGAttgccg > 2:545849/1‑245 (MQ=255) ggcagggggtggagggggCGTGAAACGGCGGCTTATCTGACGAGA‑TTCCGCAAAACGCGTGGTGTGGGGAT‑GTGAATGGTTGGACACGTAACCAAAGATGTCTCGCTGGT‑GGGACCTAAAGTGCTGGAAAAATGTATCGACTGTTCTGTGCTTTTTGAAGGCGATGGCGACTCCCGTTTGCGTACTTTACGCAGCAATAAAACCCGCTGCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGCCCGaaaa < 2:265528/234‑3 (MQ=255) gcaGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAg < 1:120830/249‑1 (MQ=255) gTGCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTGGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGt < 1:296828/251‑1 (MQ=255) gCGTGAAACGGCGGCTTATCTGACGCGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTTGGACACGTAACCAAAGATGGCTCGCTGGC‑GGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCa < 1:545849/251‑1 (MQ=255) | GCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGTAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATTTGACACGC‑TTCGCCAAAACGCGCGGTGTGGCGATTGT‑CATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGC‑TGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCA > NC_000913/4626274‑4626752 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |