| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 6,106 | G→C | L118L (CTC→CTG) | yaaA ← | DNA binding and peroxide stress response protein YaaA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 6,106 | 0 | G | C | 96.9% | 185.1 / ‑0.4 | 64 | L118L (CTC→CTG) | yaaA | DNA binding and peroxide stress response protein YaaA |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base C (37/25); total (38/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.68e-01 | |||||||||||
CATCGAGGAACACCGGCTTGATAATCTCGGCATTCAATTTCTTCGGCTTCACCGATTTAAAATACTCATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGGAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCGCCGGCGTGAAATCTGGCTGCCAGTCATGAAAGCGAGCGGCGTT‑GATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTG‑CTAATCTGCGGAGGCGTCAGTTTCCGCGCCT > NC_000913/5874‑6350 | cATCGAGGAACACCGGCTTGATAATCTCGGCATTCAATTTCTTCGGCTTCACCGATTTAAAATACTCATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCg > 1:549015/1‑251 (MQ=255) gAACACCGGCTTGATAATCTCGGCATTCAATTTCTTCGGCTTCACCGATTTAAAATACTCATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTAc > 2:150882/1‑231 (MQ=255) gAACACCGGCTTGATAATCTCGGCATTCAATTTCTTCGGCTTCACCGATTTAAAATACTCATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTAc < 1:150882/231‑1 (MQ=255) cacCGGCTTGATAATCTCGGCATTCAATTTCTTCGGCTTCACCGATTTAAAATACTCATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑c < 1:46480/251‑1 (MQ=255) ttGATAATCTCGGCATTCAATTTCTTCGGCTTCACCGATTTAAAATACTCATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATg > 1:489368/1‑251 (MQ=255) aaTCTCGGGATTCAATTGCTTCGGCTTACCCGATTAAAAATACCAATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCGTGTTGGTGATGATATAGCCCCAGAATAGATACAGATCTTTCCCGCGGGCAGTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAAACGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGtt < 2:350470/251‑1 (MQ=255) cGGCATTCAATTTCTTCGGCTTCACCGATTTAAAATACTCATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCa < 2:286857/251‑1 (MQ=255) cATTCAATTTCTTCGGCTTCACCGATTTAAAATACTCATCTGCAGCCAGATTAATCACCA‑CATTATAGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGCGCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGATGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGATAGCAGT‑CGCAAATGATGTTGGGCaaa > 2:469112/1‑250 (MQ=255) ttCATTTTCTTCTGCTTCACCGATTTAAAATACTCATCTGACGCCAGATTAACCACCA‑CATTATCGCCTTGTGCTTCGATCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATC‑CGCAAATGCTGTTGGGCAaaat < 2:602221/250‑1 (MQ=255) tcttaGGCCTCACCGATTTCCAATACTCATCTGACGCCAGATTACTCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGCTCCCCATTTCCAGACGATCAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCAGGCACGCATT‑CGCAAATGCTGTTGGGCAaaatcgaaaccg > 2:674339/1‑248 (MQ=255) tcGGCTTCACCGATTTAAAATACTCATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTc < 1:659312/250‑1 (MQ=255) ccggtttCACCGATTTAAAACACCCACCTGACGCCAGATTAATCACCT‑CATTATCGCCTGGTGCTGCGCGCGCCTCGTTCAGCTTGTTTGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTTTTGTGCAAAATCGAAATCGTc < 2:320074/245‑1 (MQ=255) cGATTTAAAATTCTCATCTGTCGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGATCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGTCTAAATCGAAATCGTTTGCGCTGAAgg < 2:483204/251‑1 (MQ=255) cGATTTAAAATACTCATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCAGGAAAGCATT‑CGCCAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAgg > 1:620178/1‑251 (MQ=255) aaaaTACTCATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTTATCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGGAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGTCAAAATCGAAATAGTCTTCGCTGAAGGTTTCgg > 2:139157/1‑251 (MQ=255) aTACTCATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGATGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCAATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAAAAGTCTTCGCTGAAGGTTTAGGCCt > 2:78756/1‑251 (MQ=255) ccTCATCTTACGCCATATTAAT‑ACTATCATTATCGTCTTGTGCTGCGAGCGCCTCGTTCTGCTTGGTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTGCAAGACGAGAAGGCTGCATTAAATCGATCGGGCGCAGTACGCCATACAAGCCGGAAATCATT‑CGCAAATGCTGTTGGTCAAAATCGAAATCGTCGTCGCTGAAGGTTTCGGCCTGc < 2:361146/250‑1 (MQ=255) gACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGGAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTCCAAGCCGgt < 1:139157/251‑1 (MQ=255) gATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGAc > 1:566070/1‑250 (MQ=255) aTTAATCACCC‑CATTATCGCCTTGTGCTGCGAGCGCCCCGTTCAGCTTGTTGGTTATGATATCTCCCCAGAATTGATACAGATCTTTCCCCCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACAt < 2:549015/251‑1 (MQ=255) aaTCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCAc > 2:166533/1‑251 (MQ=255) aaTCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTACAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTTTAGACATCAc > 1:250342/1‑251 (MQ=255) cacca‑cATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTATTCGCTAAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCtt > 2:518608/1‑251 (MQ=255) acca‑cATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGACTTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTATACATCACCttt > 2:659388/1‑251 (MQ=255) ca‑caTTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCACTTTCCAGACGATAAGGCTGCCTTAAATCGCGCGGGCGCAGTACGCCATACAAGCCGGAAAGCCTT‑CGCAAACGCTGTTGGGCACACTGGACATCGTCTTCCCTGCAGCTTTCGCCCTGCAAGCCGGTGAAGaactcaccatta > 2:184134/1‑239 (MQ=255) caTTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAgg > 2:355389/1‑213 (MQ=255) caTTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAgg < 1:355389/213‑1 (MQ=255) aTTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGCTCTTTACCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAACTCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAAcc > 1:445188/1‑250 (MQ=255) cGCCTTTTGCCGCGAGCGCCTCTTTCATCTTGGTGGTGATGATATCGCCCCAGAATTGATTCAGATATTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCATACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAATTCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTATACGCCAGa < 2:469103/251‑1 (MQ=255) ggctgctAGCGCCTCGTTCAGCTTTGTGGGGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCTATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCAGT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCt < 2:598658/250‑1 (MQ=255) cGAGGGCCTCGGTCAGATTGTTGGTGATGATATCTCCCCAGAATTGATACAAATCTGTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCgg < 2:32262/251‑1 (MQ=255) cgcCTGGTTCAGCTTGTTGGTGATGATCTCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCTCTGAATGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCTGAATCGCCTGGCTGGCAt < 2:467893/251‑1 (MQ=255) cgcCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGcct > 2:30001/1‑249 (MQ=255) cgcCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGATGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTACACTCCAGCATCGCCTGGCGGTCAt > 2:144626/1‑251 (MQ=255) gcCTCGTTCAGCTTGTTGGTCATGCTATCTCCCCAGAATTGATACAGATCTTTACCTCGGGCATTCTCAAGACGGCTCCCCATTTCCAGACGCTAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAACCGGAAAGCATT‑CCCAAATGCTGTTGGGCAAAAACGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCACGCCGGAGTAAGCATCACCTTTAAACGCCCGAATCGCCTGGCGGGcctt > 2:347417/1‑248 (MQ=255) tCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAACCGCCAGAATCGCCTGGCGGGCATTctc > 2:454508/1‑249 (MQ=255) gTTCAGTTTGTTGGTGATGATCTCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCTTTCACAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAAACGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTctcc < 2:319862/250‑4 (MQ=255) ttCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGACGGAAAGCATT‑CGCACATGCTGTTGGGCAACATCGAAATCGTCTTCGCTTAAGGTTTCGGCCTGCACGACGGTGTAGCCATCCCCTTTCAACGCCAGAATCGCCTGGCGGGCAttatccgg > 2:174764/1‑245 (MQ=255) tgGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGGGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCCTTCTCCGGCTTGGAATCt > 2:609999/1‑251 (MQ=255) gTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTgg > 1:580282/1‑251 (MQ=255) gctgatATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTTGCt > 2:45848/3‑251 (MQ=255) atatCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCa < 1:78756/251‑1 (MQ=255) tctcCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGTc > 1:443623/1‑251 (MQ=255) tctcCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGTc > 1:83315/1‑251 (MQ=255) tctcCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGACGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCAGGCTGCCCGTc > 2:385562/1‑251 (MQ=255) cccccAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGTCAt < 1:497737/250‑1 (MQ=255) ccccAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGTCa < 1:30001/249‑1 (MQ=255) aTTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGTCATGAAagcg > 1:463931/1‑250 (MQ=255) tGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGTCATGAAagcgagc > 1:145433/1‑251 (MQ=255) aTACAGATCTTTCCCTCGGGCATTCGTAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCTGGAAAGCATT‑CGCAAATGCGGTTGGGCAAAATCGAAATCGTCTTCGCGGAAGGTTTCGGTCTGCAAGCCGGTGGAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCGGGCTGCCAGTCATGAAAGCGAgcgg < 2:618537/251‑1 (MQ=255) aCAGATCTTTCCCTCGGGCATTCTCAAGACGGCTCCCCATTTCCAGACGATATGGCTGCCTTAAATCGAGCGGGCGCAGTCCGCCATCCACGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGCAATCGTCTTCGATGAAGGTTTCGGCCTGCACGCCGGTGTAGCCATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCCGTAAGGAAAGCGAgcggcg > 2:305372/1‑251 (MQ=255) ttCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACAt > 1:636339/1‑166 (MQ=255) ttCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGTCATGAAAGCGAGCGGCGTT‑g < 1:49905/246‑1 (MQ=255) ttCCCCCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACAt < 2:636339/166‑1 (MQ=255) ccccTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGGCATGAAAGCGAGCGGCGTT‑GATAccc < 2:114642/250‑1 (MQ=255) aTCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGTCATGAAAGCGAGCGGCGTT‑GATACCCGCCAGTTTGTCGCTGATGCGCAt > 1:294486/1‑251 (MQ=255) tCCCCATTTCCAGACGATAAGGATGCCTTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGAAAATGCTGTTGGGCACAATCGAAATCGTCTTCGATGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCCTGCAGTCTGGCTGCCAGTCCTGCAAGGGGGCGGCGTTTGA‑ACCCGCCAGtttttggcttatgagcat > 2:436236/1‑235 (MQ=255) cattgcaaGACGATAAGGCGGCATAAAATCGAGCGGGCGCAGTACCCCATACAAGCCGGAAAGTATT‑CGCAAATGCGGTTGGGCAAAAGCGAAATCGTCTGCGCGTAAGTTTTCGGCCTGCAAGCCGGTGTATACATCACCTTTAAACGCCATAATCGCCTGGCGGGCATTCTCCGTCGTGAAATCTGGCGGCCAGTCAGGAAAGCGAGCGGCGTT‑GATACCCGCCAGTTTGTCGCTGATGCGCATCAGCg < 1:436236/244‑1 (MQ=255) aTTTCCAGACGATAAGAATGCATTAAATCGAGCGGGCGCAGTACTCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGAAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTACGTAGTGTAATCTGGCTGCCAGTCATTAAAGCGCGCGGCATT‑GATACCCGCCAGTTTGACGCTGATGCGCATccgatt > 2:44535/1‑246 (MQ=255) gcaaTAAGGCAGAATTAAAGCGAGCGGGCGCAGTACCCCAACCAGGCCGGAA‑GCCTTGCGAAAATGCTGTTGGGAAAAATCGAAATCTTCTTCGCTGAGGGTTCCGGCCGGAAAGCCGGTGTAGACATCACGTTTAACCGCCAGAATCGCCTGGCGGGCATTCCCCGGCGTGAAATCTGGCTGCCAGTCATGAAAGGGAGGGGCGTT‑AATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTG‑CTAATCt < 2:145433/248‑1 (MQ=255) cATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCAACTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGTCATGAAAGCGAGCGGCGTT‑GATACCCGCCAGTTTGTCGCTGAAGCGCATCAGCGTG‑CTCATCTGCGGCGGCGTc > 1:99905/1‑250 (MQ=255) aaTCGAACGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACACCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGGCATGAAAGAGAGCGGCGTT‑GATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTG‑CTAACCTGCGGAGGCGTCAGTTTc > 1:291768/1‑251 (MQ=255) gagtgggcgcAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCGCCGGCGTGAAATCTGGCTGCCAGTCATGAAAGCGAGCTGCGttt < 2:636121/183‑2 (MQ=255) gAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGTCATGAAAGCGAGCGGCGTT‑g > 1:636121/1‑187 (MQ=255) aaGCGGACGCAGTACGCCATACAAAACGGAAAGCATT‑CGCAAATGCTGTTGGGCACAATCGAAATCGTCTTCGCTGAAGGTTTAGGCCTGCAAGCCGGTGTAGACATCACCTTTACACGCCAGAATCGCCTGGCGGGCCTTCTCCGGCGTGAAATCTGGCGGCACGTCCAGAAAGCTCGCGGATTT‑GATCCCCGCAAGTTTGTGTCTTGTGCG‑ATAAGCATGGCTAATCTGCGGAGGGGTCAGTTTccacg > 2:501103/2‑248 (MQ=255) ggggcgcAGTCCGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCTCCGGCGTGAAATCTGGCTGCCAGTCATGAAAGCGAGCGGCGTT‑GATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTG‑CTAATCTGCGGAGGCGTCAGTTTCCgcgctt < 1:45848/250‑3 (MQ=255) | CATCGAGGAACACCGGCTTGATAATCTCGGCATTCAATTTCTTCGGCTTCACCGATTTAAAATACTCATCTGACGCCAGATTAATCACCA‑CATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTGTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGGAGTACGCCATACAAGCCGGAAAGCATT‑CGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCGCCGGCGTGAAATCTGGCTGCCAGTCATGAAAGCGAGCGGCGTT‑GATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTG‑CTAATCTGCGGAGGCGTCAGTTTCCGCGCCT > NC_000913/5874‑6350 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |