| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,592,082 | G→A | L142L (CTG→CTA) | tsr → | methyl‑accepting chemotaxis protein Tsr |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,592,082 | 0 | G | A | 93.7% | 170.7 / 2.6 | 64 | L142L (CTG→CTA) | tsr | methyl‑accepting chemotaxis protein Tsr |
| Reads supporting (aligned to +/- strand): ref base G (2/2); new base A (32/27); total (35/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.76e-01 | |||||||||||
GTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCGGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCCATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCATCTTCGCCGTCTGGTTCGGTATTAAAGCCTCGCTGGTAGCGCCAATGAATCG > NC_000913/4591836‑4592327 | gttgCAGACGCTTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATGGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAGTTCGCTGGCGGAGCTGATCCAACTATTAg < 1:530119/251‑1 (MQ=255) tAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGCAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCCAACGTAATTACGACATTTATCACAATGCGCTGGCGGAGCTGATCCAAATATTAGGTGCAGGCaaa > 2:599287/1‑250 (MQ=255) gcgcgGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCttt < 1:292396/251‑1 (MQ=255) ggTACCCGCTAAATGATGGATCAAAATAATTGTGGGAGCGGTTCAACCTTTGCTGTGCTGATGCAGAGTGCAATTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCTTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCa < 2:670027/251‑1 (MQ=255) tACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGAccc > 1:265409/1‑250 (MQ=255) cATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAgg > 1:359873/1‑251 (MQ=255) atgGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGCAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGAGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGat > 1:101278/1‑250 (MQ=255) aacAGAATAATATTGGAAGAGGTTCAACCGTTGCTGCGCTGATGCAGAATGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGCGATCAAACGAAATTACGATATTTATCACACTGCGCTGGCGGGGCTGATCCAACTATTAGGGGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGatata > 2:70946/3‑248 (MQ=255) gAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACg > 1:565967/1‑251 (MQ=255) atTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCgg > 1:10806/1‑250 (MQ=255) ggtagggtttCAACCGTGTCGGAGCTGAGGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CGGGGCAGATTACGAAGCGTG‑GCCGCGTGCCCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCgaga < 2:12759/242‑1 (MQ=255) ggTAGCGGTTCAACCGTGGCTGAGCTGAGGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTCCGAAGCGTT‑GCCGCGTGACCCGCTTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGaa < 1:667071/251‑1 (MQ=255) tAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATCTCAGGACGGTTTCGAGAAGc > 1:242068/1‑251 (MQ=255) ggTTCAACCGTTGCTGAGCTGATGCAGAGAGCCAGTCTTTCGCTGAAACCGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGCGCACCGCCACAGCGGCAGAGCTCAAACGTAATTACGGTATTTATCACAATGCGCTGGCGGAGCTGATCCCACTATTAGGTGCAGGCAAACTCAACGAGTTCTTTGATCAACCGACCCCGGGATATCTGGACGGGTTCGAGAAgatgtc > 2:130292/1‑246 (MQ=255) gttaaaCCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGTGGAAACAGGCGGAAAAAAA‑CGGGTAAGATTACGAAGCGTT‑GCCTGGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTAt < 1:222358/247‑1 (MQ=255) cAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCACCGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTAtgtg > 1:240741/1‑251 (MQ=255) aCCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGc > 1:474489/1‑251 (MQ=255) ttgcggagcggatgcagatggCCAGTATTTCCGTGAAACAGGGGGAAAAAAG‑CTGGGCGGATTACGAAGCGTT‑GCCTCGTGACCCGCGTAAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCATCTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCtt < 1:478844/229‑1 (MQ=255) tGCTGAGCTGCTGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGGTATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCCGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCCGGGATATCAGGACGTATTCGCGATGCAGTATGTGGCTTAc > 2:327132/1‑250 (MQ=255) gagctaaTGCAGAGTGCAAGTATTGCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCTTGACCCGCGTAAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATgg < 1:327132/250‑1 (MQ=255) gaTGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCGGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGtt < 1:621232/159‑1 (MQ=255) gaTGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCGGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGtt > 2:621232/1‑159 (MQ=255) gaTGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCaa > 1:536509/1‑250 (MQ=255) tgcagagTGCCAGTATTTAGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGGTCTTTGATCAGCCGACCCAGGGAGATCAGGACGGCTTCGAGAAGCAGGAGGAGGCTTACATGGAGCAAAAc > 2:74241/4‑251 (MQ=255) agagTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGAt > 1:638101/1‑251 (MQ=255) gagTCCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CGGGGCAGATTACGAAGCGTT‑GCCGCGGGCCCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCGTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATc < 2:265409/251‑1 (MQ=255) agTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCGGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCg < 1:168594/251‑1 (MQ=255) gTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTctat > 1:563995/1‑248 (MQ=255) aTTTCGCTGAAACAGGCGGAAAAAAAACTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGGGCAGGCAAAATCAACGAGTTCTTTGATCAGCAGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGGGCAAAACGATCGGCTCTATg > 2:186427/1‑251 (MQ=255) ttccGCTGAAACAGGCGGAAAAAAA‑CGGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGc < 1:96898/207‑1 (MQ=255) ttcttataaaCAGGCGGAAAAAAT‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCGCCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCTGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGGGGCTTACATGGAGCAAAACGATCGGCTCTATGat < 2:617465/243‑1 (MQ=255) caaCAGGCGGAAAAAAA‑CTGGGCAGATTACGAAACGAT‑GCCGCGTGACCCGCGTCAGAGAACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGTGCTGATCCAACTCATAGGTGCAGGAAAAATCAGCGAGTTCTTTGATCAGCCCACACAGGGATAGCAGGACGGTTTCGAGAAGCAGAAGGAGGCTTACATGGAGCAAAACGaaggggtatatgttatacccgt > 2:410139/2‑230 (MQ=255) aGGCGGAAAAAAA‑CTGGGCGGATTACGAATCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCCATGATATCGCCGTCAGc > 1:346894/1‑251 (MQ=255) ggCGGAAAAAAC‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTAACCCGCGTCAGAGCACCGCCGCAGCGGCAGATATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCg < 2:175786/251‑1 (MQ=255) ggCGGAAAAAAA‑CGGGGCAGATTAAGAA‑CGTTTGCCGTGCGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTAGCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCg < 1:21888/251‑1 (MQ=255) aaa‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATg > 2:597824/1‑251 (MQ=255) ggcagATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTc < 2:99734/171‑1 (MQ=255) ggcagATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTc > 1:99734/5‑175 (MQ=255) gAAGCGTG‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATAGCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGc < 1:604977/251‑1 (MQ=255) t‑GCCGCGGGCCCCGCGTCAGGGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGAtgtg < 2:565967/250‑1 (MQ=255) gTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGGGGATTCtg > 2:200548/1‑251 (MQ=255) tGACCCGAGTCAGAGCACCGCCGCAGCGGCAGAGATCAACCGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACACTGCCTCCTACAGCCAGGCGCGGTGGATTCtgg > 2:627561/1‑251 (MQ=255) ccccgtgtcagggacccgccgCAGCGGCAGAGATCAAACGTAATGACGATATTTATCACAATGCGCTGGCGGAGATGATCCAACTATTAGGTGCAGGCAAAAACAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCGATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCtggtg < 2:623581/236‑1 (MQ=255) ccccGCGTCAGAGTACCGACGCAGCGGCAGAGATCAAACGTAATTACGGTATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTGTGATCAGCCGACTCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATACCAATGCCTCCTACAGCCAGGCGATGTGGATTCtggtg < 2:474489/250‑1 (MQ=255) tCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCCCAATGCGCTGGCGGAGCTGATCCAACGATTAGGGGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCAAGGGATAGCAGGCCGGTTTCGAGAAGCAGTATGTGGCGTACAGGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCAATAACATTGCCACCTACAGCCAGGCGGTGGGGATTCTGGGGGGCggg > 2:214044/1‑248 (MQ=255) cAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGCCCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGtgat > 1:623099/1‑251 (MQ=255) agCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTgatgat < 1:158947/251‑1 (MQ=255) ccccgccgCAGCGGCAGAGATCAAACGTAATTACGAGATTTATCAAAATGCGCGGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGAGTCTGGTGGGCGTGATGAtcg < 2:113084/249‑1 (MQ=255) ccgcAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTa < 1:597824/251‑1 (MQ=255) cgcAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCCACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGCCCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCCAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTCCAGCCAGGc > 1:121033/1‑216 (MQ=255) cgcAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCTATGTGGATTCTGGTGGGCGTGATGATCGTCGTAc < 1:214044/251‑1 (MQ=255) cAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTc > 1:20592/1‑251 (MQ=255) cAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCATCTTc < 1:375028/250‑1 (MQ=255) cAAAAGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATAAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTCCTGGCGGTCCTCTTcc > 1:470428/1‑250 (MQ=255) aaTTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCATCttttgccgctg > 1:670529/1‑242 (MQ=255) cGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCAACTTCGCCGTCTGGTTCg > 1:164928/1‑251 (MQ=255) cacaATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCATCTTCGCCGTCTGGTTCGGGATTTAAGc > 1:183639/1‑251 (MQ=255) caATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATTATAGCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCATCTTCGCCGTCTGGTTCGGTATTAAAGCCt < 1:625662/251‑1 (MQ=255) cTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCATCTTCGCCGTCTGGTTTGGGATTAAAGCCTccactgg > 1:637739/1‑245 (MQ=255) cGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCATCTTCGCCGTCTGGTTCGGTATTAAAGCCTCGCTGGTAgcg < 1:563079/251‑1 (MQ=255) aTCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAACACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCCGGCGATGAGGATTCTGGTGGGCGTGATGCTCGTCGTACTGGCGGTGATCTTATCCGTCGGGTTCTGTTTTAAAGCCTCCCGGGCAGCGcccgtgc > 1:608472/1‑245 (MQ=255) ccAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCATCTTCGCCGTCTGGTTCGGTATTAAAGCCTCGCTGGTAGCGCCAATGAATc < 1:200548/251‑1 (MQ=255) ccAACTATTAGGGGCAGGTCAAATCAACGAGGTGTTGGAGCAGCCGACCCAGGGATATAAGGACGGTTTCGAGAAGCAGGATGTGGCTTACATGGAGCAAAACGATCGGCTCTAGGATATCGCCGTCAGCGCTAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGGGATGATCGTCGTACTGGCGGTCATCTTCGCCGTCTGGTTCGGTATTAAAGCCTCGCTGGTAGCGCCAATGAAt < 2:179052/250‑1 (MQ=255) cAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCATCTTTGCCGCCTGGTTCGGTTTTAAAGCCTCGCTGGGAGCGCCAATGaaacc > 1:241371/1‑248 (MQ=255) | GTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCGGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCCATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCATCTTCGCCGTCTGGTTCGGTATTAAAGCCTCGCTGGTAGCGCCAATGAATCG > NC_000913/4591836‑4592327 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |