| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,591,974 | G→A | A106A (GCG→GCA) | tsr → | methyl‑accepting chemotaxis protein Tsr |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,591,974 | 0 | G | A | 87.3% | 121.8 / 9.5 | 55 | A106A (GCG→GCA) | tsr | methyl‑accepting chemotaxis protein Tsr |
| Reads supporting (aligned to +/- strand): ref base G (3/4); new base A (29/19); total (32/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.55e-01 | |||||||||||
AGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCGGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCCATGATATCGCCGTCAGCGATAACAATG > NC_000913/4591731‑4592215 | aGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACg < 1:305730/251‑1 (MQ=255) gTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑g < 1:226505/250‑1 (MQ=255) ccTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCcg > 1:86895/1‑251 (MQ=255) ttAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑ATGGGCAGATTACGAAGCGTT‑GCCGCGTGAccctcg > 1:9895/1‑248 (MQ=255) aaGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCAccgcc > 1:179052/1‑251 (MQ=255) aTTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCg > 1:64087/1‑251 (MQ=255) tACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGATGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGCGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCGGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCaa > 2:168594/1‑250 (MQ=255) cAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGAGGGAGAGTGCAAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CGGGGCGGATTACGAAGCGTT‑GCCGCGTGACCGGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACg < 2:61408/251‑1 (MQ=255) aTTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAAtt > 1:640318/1‑250 (MQ=255) cGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACg > 1:430614/1‑250 (MQ=255) caATCCACGCTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATc > 1:598610/1‑250 (MQ=255) ccGCTGAATGGCAGCTGGGTCGCGTTGT‑GGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTAAATGATGGATAAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATgc < 1:484928/250‑1 (MQ=255) cTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGAAGCGGCAGAGATCAAACGTAATTACGATTTTTATCACAATGCGCt > 2:292396/1‑251 (MQ=255) gAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTg < 1:339553/250‑1 (MQ=255) gccgCTGGGTCGCGT‑GTGTGCAGACGCTTAACACCCTCAACCGCGCGGGTAGCCCCTACAGGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGAAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CGGGGAAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAg < 2:572196/248‑1 (MQ=255) cTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGCGCTGATGCAGAGTGCCAGTATTTCGATGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGTCCCGCGTCAGAGCACCGCCGCAGCGGCAGAGCTCAACCGTAATTTCGATATTATTCACAATGAGCCGGCAGAGCTgg > 2:158947/1‑250 (MQ=255) gggTGGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGGTGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTGCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGGCCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATc < 1:612537/251‑1 (MQ=255) gTCGCTTTGT‑TGCAGACGCTTAACCCCCTCACCCGCGCGGGTATCCCCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGATGATGCAGAGTGCCAGTATTTCGCTGAACCAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGCCCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCa < 1:558259/251‑1 (MQ=255) gttgt‑tGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACtat > 1:12759/1‑249 (MQ=255) gt‑tgCAGACGCTTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATGGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAGTTCGCTGGCGGAGCTGATCCAACTATTAg < 1:530119/251‑1 (MQ=255) tAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGCAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCCAACGTAATTACGACATTTATCACAATGCGCTGGCGGAGCTGATCCAAATATTAGGTGCAGGCaaa > 2:599287/1‑250 (MQ=255) gcgcgGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCttt < 1:292396/251‑1 (MQ=255) ggTACCCGCTAAATGATGGATCAAAATAATTGTGGGAGCGGTTCAACCTTTGCTGTGCTGATGCAGAGTGCAATTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCTTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCa < 2:670027/251‑1 (MQ=255) tACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGAccc > 1:265409/1‑250 (MQ=255) cATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAgg > 1:359873/1‑251 (MQ=255) atgGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGCAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGAGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGat > 1:101278/1‑250 (MQ=255) aacAGAATAATATTGGAAGAGGTTCAACCGTTGCTGCGCTGATGCAGAATGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGCGATCAAACGAAATTACGATATTTATCACACTGCGCTGGCGGGGCTGATCCAACTATTAGGGGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGatata > 2:70946/3‑248 (MQ=255) gAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACg > 1:565967/1‑251 (MQ=255) atTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCgg > 1:10806/1‑250 (MQ=255) ggtagggtttCAACCGTGTCGGAGCTGAGGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CGGGGCAGATTACGAAGCGTG‑GCCGCGTGCCCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCgaga < 2:12759/242‑1 (MQ=255) ggTAGCGGTTCAACCGTGGCTGAGCTGAGGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTCCGAAGCGTT‑GCCGCGTGACCCGCTTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGaa < 1:667071/251‑1 (MQ=255) tAGCGGTTCAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATCTCAGGACGGTTTCGAGAAGc > 1:242068/1‑251 (MQ=255) ggTTCAACCGTTGCTGAGCTGATGCAGAGAGCCAGTCTTTCGCTGAAACCGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGCGCACCGCCACAGCGGCAGAGCTCAAACGTAATTACGGTATTTATCACAATGCGCTGGCGGAGCTGATCCCACTATTAGGTGCAGGCAAACTCAACGAGTTCTTTGATCAACCGACCCCGGGATATCTGGACGGGTTCGAGAAgatgtc > 2:130292/1‑246 (MQ=255) gttaaaCCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGTGGAAACAGGCGGAAAAAAA‑CGGGTAAGATTACGAAGCGTT‑GCCTGGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTAt < 1:222358/247‑1 (MQ=255) cAACCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCACCGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTAtgtg > 1:240741/1‑251 (MQ=255) aCCGTTGCTGAGCTGATGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGc > 1:474489/1‑251 (MQ=255) ttgcggagcggatgcagatggCCAGTATTTCCGTGAAACAGGGGGAAAAAAG‑CTGGGCGGATTACGAAGCGTT‑GCCTCGTGACCCGCGTAAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCATCTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCtt < 1:478844/229‑1 (MQ=255) tGCTGAGCTGCTGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGGTATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCCGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCCGGGATATCAGGACGTATTCGCGATGCAGTATGTGGCTTAc > 2:327132/1‑250 (MQ=255) gagctaaTGCAGAGTGCAAGTATTGCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCTTGACCCGCGTAAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATgg < 1:327132/250‑1 (MQ=255) gaTGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCGGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGtt < 1:621232/159‑1 (MQ=255) gaTGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCGGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGtt > 2:621232/1‑159 (MQ=255) gaTGCAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCaa > 1:536509/1‑250 (MQ=255) tgcagagTGCCAGTATTTAGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGGTCTTTGATCAGCCGACCCAGGGAGATCAGGACGGCTTCGAGAAGCAGGAGGAGGCTTACATGGAGCAAAAc > 2:74241/4‑251 (MQ=255) agagTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGAt > 1:638101/1‑251 (MQ=255) gagTCCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CGGGGCAGATTACGAAGCGTT‑GCCGCGGGCCCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCGTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATc < 2:265409/251‑1 (MQ=255) agTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCGGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCg < 1:168594/251‑1 (MQ=255) gTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTctat > 1:563995/1‑248 (MQ=255) aTTTCGCTGAAACAGGCGGAAAAAAAACTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGGGCAGGCAAAATCAACGAGTTCTTTGATCAGCAGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGGGCAAAACGATCGGCTCTATg > 2:186427/1‑251 (MQ=255) ttccGCTGAAACAGGCGGAAAAAAA‑CGGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGc < 1:96898/207‑1 (MQ=255) ttcttataaaCAGGCGGAAAAAAT‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCGCCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCTGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGGGGCTTACATGGAGCAAAACGATCGGCTCTATGat < 2:617465/243‑1 (MQ=255) caaCAGGCGGAAAAAAA‑CTGGGCAGATTACGAAACGAT‑GCCGCGTGACCCGCGTCAGAGAACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGTGCTGATCCAACTCATAGGTGCAGGAAAAATCAGCGAGTTCTTTGATCAGCCCACACAGGGATAGCAGGACGGTTTCGAGAAGCAGAAGGAGGCTTACATGGAGCAAAACGaaggggtatatgttatacccgt > 2:410139/2‑230 (MQ=255) aGGCGGAAAAAAA‑CTGGGCGGATTACGAATCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCCATGATATCGCCGTCAGc > 1:346894/1‑251 (MQ=255) ggCGGAAAAAAC‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTAACCCGCGTCAGAGCACCGCCGCAGCGGCAGATATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCg < 2:175786/251‑1 (MQ=255) ggCGGAAAAAAA‑CGGGGCAGATTAAGAA‑CGTTTGCCGTGCGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTAGCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCg < 1:21888/251‑1 (MQ=255) aaa‑CTGGGCAGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAATg > 2:597824/1‑251 (MQ=255) | AGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGT‑TGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAA‑CTGGGCGGATTACGAAGCGTT‑GCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCCATGATATCGCCGTCAGCGATAACAATG > NC_000913/4591731‑4592215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |