| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,535,073 | A→G | intergenic (‑1020/‑1524) | topAI ← / → ythB | toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,535,073 | 0 | A | G | 91.4% | 141.6 / 4.9 | 59 | intergenic (‑1020/‑1524) | topAI/ythB | toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB |
| Reads supporting (aligned to +/- strand): ref base A (1/4); new base G (27/26); total (28/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.91e-01 | |||||||||||
CTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGATTGTTCTCTTTTCT > NC_000913/4534828‑4535314 | cTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCctc > 1:471365/1‑251 (MQ=255) ggCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAACCCTCtt < 2:275381/251‑1 (MQ=255) cAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTg > 1:675856/1‑250 (MQ=255) aGCGTAATGCAGTTATCCCAGCTCATCTCTCACTTCCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGTGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTGTGCGATCACGGGAAGGTGCAGACTAAAAGAGTGATTGAAAAAGGACGATTTTCCCCGTAATGGGATATATACATAGTGATGGTAGAGGCATGAAGCCAAATGGTGGGAGCCGGCAGAGCCCTCTTGaa < 2:552057/251‑1 (MQ=255) cAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATTGTCGCTGTTTCAATAACATCATCGACTACGGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGATCCGTCATAGCCCTCTTGAAGCTGAAACa < 2:115322/251‑1 (MQ=255) cAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTGTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATTGCAGCAGGGCt < 2:443871/251‑1 (MQ=255) cACTACCAGTATGATCCCAAGTTCGAGCGCGGCATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGc > 2:105824/1‑250 (MQ=255) ccAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATaa < 1:212183/251‑1 (MQ=255) cccAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGatat < 1:187092/250‑1 (MQ=255) ccAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGAtata > 2:341241/1‑250 (MQ=255) aGTTCGAGCGCGGAAGGTATCTGTACGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGGAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGTGATGGAAAAAGGACGATTCTCCCCGCAATGGGATATTTACATATTGATGGGAGAGGCAGGAAGCCAAATGTAGGGAGCCGTCATAGCCCTCTTGAAGCGGAAACAATAGGAGCATGGCTGGTCGCACATAAGGATGATATAGAgc < 2:293240/251‑1 (MQ=255) cccgAATCTATCTGTATGAGCATCGTTGCTGTTTCAATAACATCAACGACTATTGTAACTCACTTTGCTTTTCCGTTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGAGTTTCCCCGCAATGGGATATTTTCATATTGATGGGAGAGGCATGAAGCCAAATTTAGTGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATATCAGCATGGCTGTTGGCACATAAGGATGATATAGAACGCTAttccg < 2:48886/248‑4 (MQ=255) cgGAATGTATCTGTATTAGCATCGGCGCTGTTTCAATAACATCATCGACTACTTGAACTCACTTTGCTATCTCGGTAAGTTGCAGCTTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACgg < 2:424981/251‑1 (MQ=255) cgGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAACAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGTTGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAACAGCATGGCTGGTGGCACATAAGGATGATATAGAGGGCCagttcgg > 2:14180/1‑245 (MQ=255) gAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCAAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACCTAAGGATGATATAGAGCGCCATAACgggg > 1:649448/1‑251 (MQ=255) aaTGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACgggg > 1:595268/1‑250 (MQ=255) aTCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGGGGAACATAAGGATGATATAGAGCGCAATTTCGGGGAACCAc > 2:240990/1‑251 (MQ=255) tATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATag > 1:78552/1‑225 (MQ=255) tATGAGCATCGTCGCTGTGTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATag < 2:78552/225‑1 (MQ=255) tGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCCCATAAGGATGATATAGAGCGCCATTACGGGGAACCCATGTACa > 2:587016/1‑250 (MQ=255) cATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGGCCATAAGGATGATATAGAGCGCCATTACGGGGAACCCCTGTACAAAgtt > 2:462902/1‑251 (MQ=255) aTCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGAAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTAATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCAATTACGGGGAACCACTGTACAAAgttg > 1:581130/1‑251 (MQ=255) ttCAATAACATCATCGACTACGGTAACTCACATTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATATCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCAGTACGGGGAACCACTGTACAAAGTTGTTGGtgttgt < 2:661245/250‑1 (MQ=255) cAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGAc < 1:364788/251‑1 (MQ=255) catcatCGACTACTGTAACTCACGTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCAtt < 1:621560/251‑1 (MQ=255) catcGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCCAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGCTATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTTTGAAGCCATTTTc > 2:589298/1‑251 (MQ=255) catcGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACAt < 1:362354/183‑1 (MQ=255) catcGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGGGGCACAt > 2:362354/1‑183 (MQ=255) cgaatactgttacctacgttGCTAGCACGGTAAGTTGCAGCCTAAAAGATGGATGGAAAAAGGACGATTTTCCTCGTAATGGGATAATTACATATGGATGGTAGAGGCATGAAGACAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCAGTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCgg < 2:13859/232‑1 (MQ=255) tactGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGgcgt > 1:107013/1‑248 (MQ=255) gTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTa < 1:587016/251‑1 (MQ=255) aaCTCACTTTGCTATCACGGTAAGTTGCAGCCCAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGca > 1:317905/1‑167 (MQ=255) aaCTCACTTTGCTATCACGGTAAGTTGCAGCCCAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGca < 2:317905/167‑1 (MQ=255) aCTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATg < 2:209563/251‑1 (MQ=255) tATCCCGGTAAGTTTCAGCCTAAAATAGGTATAGAAAAAGGACGATTTTCCCCGCAAGGGGATAATTACATATTGATTGTAGAGGCATGAAGCCAAATGGAGTGAGCCGTCATAGCCCGCTTGAAGCTTAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAATTTATTGGTGTTGGGACGTCATTTTCTGCGTAGGTTAATGCTATCAAAAt < 2:442059/250‑1 (MQ=255) tATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGCGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATg > 1:405218/1‑251 (MQ=255) gTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAACCCGCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTTGTGTTGTGACGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCAtt < 2:177069/249‑1 (MQ=255) aggcTAAAAGAGGGAATGAAAAAGGACGATCGTTCCCGCAATGGTATTTTTACACATGGATGGTAGAGGCATGAAGACAAATGGAGGGAGTAGTCATAGCCCTGTTGAATCGGAATCAATATTAGCATGGCTGGCGGCACAGCAGGAGGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTGCGGCGTAGGTTAATGCTAGCAAAAGGGCATTGCGTAAGCTgg < 2:476792/248‑1 (MQ=255) agagGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCACTCTTGAAGCTGAAACAATAGCAGCATGGCTGGGGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACAACTGTACAAAGTTGTTGGTGTTGTGAAGCAATTTTCGGCGTAGGTGAATGCTATCAAAATGTAATTGAGTAGGCTGGAAAGTAAt > 2:328495/1‑251 (MQ=255) agGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATgg > 1:332012/1‑251 (MQ=255) ggAAAAAGGACGATTTGCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTTTACAAAGTTGTTGGTGGTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAg < 2:220114/250‑1 (MQ=255) aTTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGttt < 1:105824/251‑1 (MQ=255) ttttCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGga > 1:466898/1‑118 (MQ=255) gtttCCCCGCAATGGGATATTTACATATTGATGTTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCGTGAAGCTGAAACAATAGCAGCAGGGTTGGTGGCACATAAGga < 2:466898/117‑1 (MQ=255) cGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGAc > 2:537858/1‑249 (MQ=255) cAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGACCCACTGTACACAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAGGCTGAAATTTAATGGCAAAGACGAGCAGGGTTTACTGACAGTg > 2:400656/1‑251 (MQ=255) tatTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACtgt > 1:178916/1‑251 (MQ=255) aCATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACt < 1:537858/251‑1 (MQ=255) atTGATGGTAGAGGCAAGAAGCCAAATGGAGGGTGCCATCATAGCCCACGTGAAGCTGAAACAATAGCATCATGGCTGGTTGCAAATAAGGATTATATAGAGCGCCATTACGGGGAACCCCTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTAGCAAAATGTCAGTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGTTTTACTGACAGTGGGGACTGTGCACTCCtt < 2:177826/251‑1 (MQ=255) gATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGGTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTga < 2:391914/250‑2 (MQ=255) agggTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCCTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAg < 2:47708/249‑1 (MQ=255) aTGGTAGAGGCATGAAGCCAAATGGCGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGTAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGc > 2:156372/1‑249 (MQ=255) tGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAgg > 1:644050/1‑251 (MQ=255) aaGCCAAATGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGc < 1:452551/251‑1 (MQ=255) aaGCCAAATGGAGGGAGCAGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGc > 1:113520/1‑251 (MQ=255) aaaTGGAGGGAGCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGATTg > 1:228209/1‑251 (MQ=255) agggagtgaggcggcATAGCCCTCTTGAAGCTGAAACAATAGCAGTAGTGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTATAAAGTTGTTGGTGTTGTGACGCCATTTTCGGTGTAGGTTAATGCTATCAAAATTTCATTGCGTAATCTGTAAATTAATGGCAAAGACTAGAAGGGTTTACTGACAGTGTGGACTGTGCCCTCCGTGCAGGGGGCGGAAAGGGCGTTTGtt < 2:652751/237‑1 (MQ=255) agggagCCGTCATAGCCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAAGGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGATTGTTctct < 1:400656/251‑1 (MQ=255) gCCGACATAGCCATCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGTAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGTAATTTCATGGCAAAGAAGAGCAGGGTTTACTGCCAGTGGGGACTGTGCACTCCTAGCAGGGGGCGGAAAGGGCGATTGTTCTCTTTtct > 2:126331/1‑251 (MQ=255) | CTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGATTGTTCTCTTTTCT > NC_000913/4534828‑4535314 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |