| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,496,168 | G→T | G14G (GGC→GGA) | ahr ← | NADPH‑dependent aldehyde reductase Ahr |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,496,168 | 0 | G | T | 98.6% | 209.5 / ‑3.8 | 73 | G14G (GGC→GGA) | ahr | NADPH‑dependent aldehyde reductase Ahr |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (34/37); total (35/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.36e-01 | |||||||||||
GCTACGCGCCGTCCAGCCAATCCCGACACGCTGACCGACCTGCAAACCTTTATCCTGCGCGGCGCTCCCGAGTGCCACCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCGCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGCATGGTGGCGTGCGACAGGTATAATCCACAACGTTTTCCGCATACCTCTTCAGTGCCG > NC_000913/4495925‑4496408 | gCTACGCGCCGTCCAGCCAAACCCGACACGCTGACCGACCTGCAAACCTTTATCCTGCGCGGCGCTCCCGAGTGCCACCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTccgcccg < 1:252305/251‑1 (MQ=255) cgcCGTCCAGCCAATCCCGCCCCTCTGACCGACCTGCAAACCTTTATCCTGCGCGGCGCGCCCGAGTCCCACCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTACCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCC‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGcttc < 2:146259/249‑1 (MQ=255) ccctCCACCCAATCCCGACACGCTTACCGACCTGAAAACCTTTATCCTGCGCGGCGCTCCCGAGTGCCACCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCtttt < 2:14710/248‑1 (MQ=255) acccAAACCCGTCACGCCGACCGACCTGCAACCCTTTATCCTGCGCGGCGCACCCGAGTGCCACCACGCGCCCAATCACCCCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCa < 2:523384/249‑1 (MQ=255) cccAATCCCTACACGCTGGCCGACTTGCAAACCTGTATCCTGCGCGGATATCCCGAGTGACTCCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAATACCCCAGTCGTTATCGATCAGCTACAGATCGGAATGGCAGATCCCGCAGTAAGCCA‑CCTGCACTCCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCTCCCGCTTCTATTGCGGCAt < 2:516178/250‑1 (MQ=255) cccGACACGCTGACCGACCTGCAAACCTTTATCCTGCGCGGCGCTCCCGAGTGCCACCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCttt < 1:137251/251‑1 (MQ=255) cacGCTGACCGACCTGCAAACCTTTATCCTGCGCGGCGCTCCCGAGTGCCACCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTatc > 1:46303/1‑251 (MQ=255) cctccccgcctctcttccgatccccTGCGCGGCGCCCCCGAGTGCCACCCCGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGTTCACCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCg < 2:532818/228‑1 (MQ=255) cTGACCGACCTGCAAACCTTTATCCTGCGCGGCGCTCCCGAGTGCCACCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCg > 1:92119/1‑251 (MQ=255) gaccgaccTGCAAACCTTTATCCTGCGCGGCGCTCCCGAGTGCCACCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGAc < 1:263667/251‑1 (MQ=255) gCAAACCTTTATCCTGCGCGGCGCTCCCGAGTGCCACCACGCGCCCAATCACCTCATGCCCGTCAACCAGCTGATATTGTGAAAACCCCCATTCGTTTTCGATCATCGACAGATCGGAATGGCAGACCCCGCAGTAATCCC‑CCTGCACTTCAACACC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACAttttta < 2:110919/249‑2 (MQ=255) ttATCCTGCGCGGCGCTCCCGAGTGCCACCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTtctc > 1:399115/1‑251 (MQ=255) tgtcccgtcgctgtgcgcctgAGTGCCACCACGCGCCCAATCCCCGCATGCCCGTCAACCAGCGGATCTGGGGAACACCCCAAGTCGTTTGCGATCATCGACAGATCGGAATTGCAGACCCCGCAGTAATCCA‑CCTTCACTTCAACAGC‑GTGTGGCCTCAGTTCGGCGGGAGCGTACTCATAA‑CTGTCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTTGTCTTtct < 2:324948/230‑1 (MQ=255) aaccTGCGCGGCGCTCCCGAGGGCCACCCCGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTg < 2:304420/249‑1 (MQ=255) ccTGCGCGGCGCTCCCGAGTGCCACCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCg > 1:532818/1‑228 (MQ=255) cgcgGCGCTCCCGAGTGCCACCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGtgttg < 1:146868/251‑1 (MQ=255) ccTCCCGTGTTCCACCACGCGCCCAATCACCTCTTGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGAGCATCTACAGATCGGAATGGCAGATCCCGCATTAATCCC‑CCTGCCCTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATTGTTCTCATAATCT‑TCCAGTTCTCCTCCCGCTTCTTTTGCTGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTggg < 2:490133/250‑1 (MQ=255) ccagAGTGCCACCACGCGCCCAAGCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGTTCACCGGGATAGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTatcatc < 1:607558/211‑1 (MQ=255) cacaacGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGACGTGTAGAGc > 2:567593/5‑250 (MQ=255) accacGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATGGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCAt < 1:248143/251‑1 (MQ=255) ccccgcCCAATCCCCTCAGGCCCGGCACCCAGCGGATAATGTGAAAACCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCGCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTGTATCATCGACATTTTGTGGTCCTTCTCTGGTGTTGTTTGGGAAGGGTAGAGCATGGc < 2:46303/248‑1 (MQ=255) cgcCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACAtt > 1:414288/1‑204 (MQ=255) gcCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAggg < 1:305292/251‑1 (MQ=255) aTCACCTCATGCCCGGCAACCAGCGGATATTGTGAAACTCCCCATTCGGTATCTATCATCGACAGATCGGAATGGCAGATCTCGCAGTAATCCT‑CCTGCACTTCAACTCC‑TTGTGTCCTCAGCTCTCCGGGATCGTACTCATAATCT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGTGAAGTGTAGAGCATGGCTGGGCgggg < 1:23835/251‑1 (MQ=255) tCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTCTCGCTCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGCTCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCggggg > 1:283235/1‑250 (MQ=255) ccccTCATGCCCGGCAACCAGCGTATATTGTGAAAATCCCCATTCTTTATCGATCATCGACAGATCGGAAGGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCTCCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATGTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTg < 2:256443/249‑1 (MQ=255) gCCCGGGAAACAGCGGATATTGTGAAAATCCCCATTCGTTTACGACCACCGACAGATCGGAATGGACGATCCCGCAATAATCCC‑CCTGCACTTCAACATT‑TTGTGGCCCCAGCCCACCGGGGTCGTACTCAAAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTAGCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAgt < 2:282840/251‑1 (MQ=255) gCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGAAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCTGTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTgggtg > 2:648568/1‑248 (MQ=255) gCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATAATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCGTGGCAGGACGGGGTGCCTGGAGTGTGACAAAGGtt > 2:468204/1‑251 (MQ=255) ggATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCG‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTTCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTac < 1:282009/251‑1 (MQ=255) ggATATTGAGAAAATCACCATTCGTTATCGGTCATCGACAGATCGGCATGGCTGATACCGCAGTAATCCA‑ACTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACA‑TACATTTCTACGCCGGCTTCTTTTTCGGCATAGCTTTTTATCATCGACATTTTTTGTTCCTTCTCTGTTGTGGTTTGGGAGGAGTAGCGCATGACTGGACGGGGCGCCTgcactgggaataatgttat > 2:195131/1‑233 (MQ=255) aaaTCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTg > 1:240153/1‑168 (MQ=255) aaaTCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTg < 2:240153/168‑1 (MQ=255) cATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATg < 1:239478/251‑1 (MQ=255) aTTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACCTCACTGTATGCACTGc > 2:256092/1‑251 (MQ=255) cGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGa < 1:183125/251‑1 (MQ=255) tCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAAtt > 1:564948/1‑251 (MQ=255) gATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTc > 1:413957/1‑251 (MQ=255) atcatcGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATTGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTc > 1:183225/1‑250 (MQ=255) catcGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAg < 1:636659/250‑1 (MQ=255) atcGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGc > 1:599090/1‑250 (MQ=255) actgaaagagcggaagagCAGATCCCGCAGTAA‑CCAGCCGTCCCTTCAACATCGTTG‑GGCCACAGCTCACCTGGATCGTACTCATAAACT‑TCCATTTCTCCGCGCGCTTCTTTTGCGGCATAGCTTGTGATCATCGACATTTTTTGGTCCTACTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCa < 2:352041/234‑1 (MQ=255) cGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCAc < 1:39451/250‑1 (MQ=255) cAGATCGGAATGGCAGATCCCTCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAg < 1:563628/251‑1 (MQ=255) cAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCCACATC‑TTGTGGCCTCAGCTCCCCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGAAAGGCGGGGGGCCTGGAGTGTGCGAAAGGTTACAAATCGTTGTATGCAATGCTGAAAATTTCAGAACttcg > 2:156602/1‑249 (MQ=255) aGATCGGAATGGCAGATCCCGCATTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCCCCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGc < 1:433802/251‑1 (MQ=255) aTCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACCCATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCg > 2:543135/1‑250 (MQ=255) tCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAAAATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCGTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCg > 1:232781/1‑249 (MQ=255) tGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCg < 1:251254/209‑1 (MQ=255) tGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCg > 2:251254/1‑209 (MQ=255) tCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCt > 1:548055/1‑251 (MQ=255) ccGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTgg > 1:261461/1‑251 (MQ=255) aGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCt > 1:141656/1‑251 (MQ=255) gTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCtt > 1:545277/1‑251 (MQ=255) gtaatctcccTGCACGTCAACAGC‑TGTTGGACTCAGCTCACCGGGATCGTACCTAGAAACT‑TTCAGTTCCCCCCACGCTAGTTGTGCGGCATAGCTGTTTATCATCGACATTTTTTTGTTCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCTGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACAGCGCTGTGTGCAATGTTGAAAATTTCAGCACTTAGCGAGGTGCGAGCGAGCTGgcgcgt < 2:632079/243‑3 (MQ=255) aaTCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGTTCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCGTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGc < 1:640670/251‑1 (MQ=255) aTCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCT‑CTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCCATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGCAt > 2:247819/1‑251 (MQ=255) ccA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCGCCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGAGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGACGCTTGCAtg > 1:162460/1‑251 (MQ=255) cccTGCTCTTCACCATC‑TTTGGGCCGCAGTTCTCCGGGATCGTACTACTATCCT‑TCCATTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTGTTGGTCCTTCTCTGGTGTTGTTTGGGAAGGGGAGAGCATGGCAGGGCGTGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAAGTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGCAtggt < 2:400227/250‑1 (MQ=255) ttCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAGGTGTAGAGCATGGCAGGGAGGGGTGCCTGGAGTATGACATAGGTTACACATAGCTGTATGAAATGCTGAAAATTTCAGCACTTCGCGAGGTGAGCGAAAGCTGGCGCTTGCAtggtggatgggt > 2:25034/1‑245 (MQ=255) aCATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGCATGGTGGCGTGCGAc > 1:290329/1‑249 (MQ=255) cTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCa < 1:480247/121‑1 (MQ=255) cTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCa > 2:480247/1‑121 (MQ=255) cAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGCATGGTGGCGTGCGACAGGTATAATCcaca < 1:623176/249‑1 (MQ=255) taTCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGACCTTCTCTGGTGTTGTTTGGGA‑GTTGAGAGCATGGCTGGGCGGGGTGCCTAGAGTGTGGCAGCGGTTACACCTCGCTGTATGCAATGCTTAAACTTTAAGCACTTACCGAGGTGCGGGGCAGCTGGCTCTTGCATAGTGGCGTGCGACAGGTATAATccccacagttttcagaatc > 2:189765/2‑234 (MQ=255) gATCGTACTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCACTGCTGAAAATTTCAGCACTTAGCGAGGAGCGAGCAAGCTGGCGCTTGCATGGAGGCGTGCGACAGGTATAATCCACAACGTTTTCCGCAt > 2:850/1‑251 (MQ=255) cTCATAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGCATGGTGGCGTGCGACAGGTATAATCCACAACGTTTTCCGCATACCTCtt > 1:106659/1‑251 (MQ=255) cTCATAAACT‑TCCAGTTCGCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGCATGGTGGCGTGCGACAGGTATAATCCACAACGTTTTCCGCATACCTCtt > 2:322590/1‑251 (MQ=255) aTAAACT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGCGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGCATGGTGGCGTGCGACAGGTATAATCCACAACGTTTTCCGCATACCTCTTc > 1:391258/1‑249 (MQ=255) aaaCT‑TCCATTTCTCCGCCCGCTTCGTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGCATGGTGGCGTGCGACAGGTATAATCCACAACGTTTTCCGCATACCTCTTCAGTg < 2:141656/251‑1 (MQ=255) aaaCT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAATCTGGCGCTTGCATGGTGGCGTGCGACAGGTATAATCCACAACGTTTTCCGCATACCTCTTCAGt < 1:495959/250‑1 (MQ=255) aaaCT‑TCCAGTTCTCCGCCCGCTTCTTGTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTATGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGCATGGTGGCGTGCGACAGGTATAATCCACAACGTTTTCCGCATACCTCTTCAGt < 1:25034/250‑1 (MQ=255) cT‑TCCAGTTCTCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGCATGGTGGCGTGCGACAGGTATAATCCACAACGTTTTCCGCATACCTCTTCAGTGCCg > 1:130044/1‑251 (MQ=255) | GCTACGCGCCGTCCAGCCAATCCCGACACGCTGACCGACCTGCAAACCTTTATCCTGCGCGGCGCTCCCGAGTGCCACCACGCGCCCAATCACCTCATGCCCGGCAACCAGCGGATATTGTGAAAATCCCCATTCGTTATCGATCATCGACAGATCGGAATGGCAGATCCCGCAGTAATCCA‑CCTGCACTTCAACATC‑TTGTGGCCTCAGCTCACCGGGATCGTACTCATAAACT‑TCCAGTTCGCCGCCCGCTTCTTTTGCGGCATAGCTTTTTATCATCGACATTTTTTGGTCCTTCTCTGGTGTTGTTTGGGAAGTGTAGAGCATGGCAGGGCGGGGTGCCTGGAGTGTGACAAAGGTTACACATCGCTGTATGCAATGCTGAAAATTTCAGCACTTAGCGAGGTGCGAGCAAGCTGGCGCTTGCATGGTGGCGTGCGACAGGTATAATCCACAACGTTTTCCGCATACCTCTTCAGTGCCG > NC_000913/4495925‑4496408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |