| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,495,194 | A→T | F339Y (TTT→TAT) | ahr ← | NADPH‑dependent aldehyde reductase Ahr |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,495,194 | 0 | A | T | 98.6% | 214.0 / NA | 69 | F339Y (TTT→TAT) | ahr | NADPH‑dependent aldehyde reductase Ahr |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (37/31); minor base G (1/0); total (38/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
AAACTATTCTCGCGCGAATGCAGCGTCGGGCTGGGCATTTTATGCCGGTAGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAAAAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCACCGACCGTATGGA > NC_000913/4494951‑4495437 | aaaCTATTCTCGCGCGAATGCAGCGTCGGGCTGGGCATTTTATGCCGGTAGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCCGATCAGCGCTGCGAATGATTTTCAATAATCGGc > 2:650004/1‑251 (MQ=255) gCAGCGTCGGGCGGGGCATTGTATGCCGTTAGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCAAAAGCAGATGAACAGGATAGTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCGCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACCCCGCGCGGTa < 2:177220/250‑1 (MQ=255) cGTCGGGCTGGGCATTTTATGCCGGTAGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAAcgcg > 1:91447/1‑251 (MQ=255) gTCGGGCTGGGCATTTTATGCCGGTAGCGTTACTAAAAAGTCGGTTTGGGGCACTGGAGCGTCAACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAA‑CACGAATATGTGCGAAAGAGGGCAGCGCCTCGGACCAGCGCTTGGAATGATTTTCAGTAATAGGCTTTCAAAACCACGCGGTAACgcgc > 2:205899/1‑251 (MQ=255) ggCTGAGCATTTTATGCCGGTAGAGTTACTAAAAACTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGACGCGACGCC‑AAACAA‑GAATATGAGCGACAGAGGGCAGCGCCTCCGATAAGCGCTGCGAATGGTTTTCAATAATCTGCTTTCCACACCAACCGGTAACGCGCCttc > 2:429809/1‑250 (MQ=255) gCTGGGCATTTTATGCCGGTAGCGTTACTAAAAAGTCAGTTTGAGGCACTTGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGAGTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTAc < 2:91447/251‑1 (MQ=255) ttttATGCCGGTAGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCgcgc > 1:369850/1‑251 (MQ=255) gCCGGTAGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCCATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGc > 1:50000/1‑251 (MQ=255) ccGGTAGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCt < 1:119668/251‑1 (MQ=255) aGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATg < 1:551195/251‑1 (MQ=255) gCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATgg > 1:542121/1‑251 (MQ=255) cTAAAAAGGCAGTTAGAGGCAAGGGAGCGGCTACAAGCACGTGAACAGGATATTGTGCGCATTGATATCAACAATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGTTACGACTAAAAC‑‑GCATATGTGCGGAGAAGGGCAGCGCCTCAGATCCGCGCTGCGCATGATTTTCAAGAATCGGCTTTCCACACCACGCGGTAAAACACCTTACGGTCgcgccaatactggctggccacgg > 2:71796/1‑232 (MQ=255) aaGTCAGTTTGAGGCTCTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGTGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAAtt < 1:176880/251‑1 (MQ=255) tGAGGCACTGGAGCGTCCACAAGCAGATGATCAGGATATTGTGCGCATTGATATCAACCATTATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACAt < 1:344581/250‑1 (MQ=255) ggCACTGGAGCGTCCACAAGCAGATGAACAGGATATTTTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACGCCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTTGATGGCGTCGTTAATTTTCGACATCggg < 2:394807/251‑1 (MQ=255) tGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCACCACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAAc > 2:517800/1‑249 (MQ=255) ggAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACa < 1:650004/249‑1 (MQ=255) gCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACCGTTCg > 1:100167/1‑251 (MQ=255) atCCACAAGCAGATGCACAGGATATTGTGCGCATTGCTATCAACCATAATATTGCCAATGTCACCGAACAATGTCGGCCGGCTGTGCTAGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGCGCGCAGATCCACAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGAGGTAACGCGCCTAACCGTCGCGCACATCATGGATGGCGTCGTTAATTTTCGCAAGCGGGGACAGTTCgtg > 2:509445/2‑249 (MQ=255) cacaAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATc > 1:468585/1‑234 (MQ=255) cacaAGCAGAGGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATc < 2:468585/234‑1 (MQ=255) aGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGCGAACAGTTCGGTGGTCGgc > 1:570150/1‑251 (MQ=255) aGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGAGTCGTTAATTTTCGACATCGGGAAACGTTCGGTGGTCGgcgc > 2:171521/1‑250 (MQ=255) aCAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTtg < 1:636101/251‑1 (MQ=255) cAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGATCGGTGGTCGGCGCAACCTtgc > 2:633350/1‑251 (MQ=255) aGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTtgct < 1:286933/251‑1 (MQ=255) aTTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCATTAATTTTCGACATCGGGa < 2:565358/209‑1 (MQ=255) aTTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCATTAATTTTCGACATCGGGa > 1:565358/1‑209 (MQ=255) gATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTACCGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGAAACCTTGCTGCGGGCGGCAAAACGc > 1:327815/1‑250 (MQ=255) atCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAAcacca < 1:492476/140‑1 (MQ=255) atCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAAcacca > 2:492476/1‑140 (MQ=255) atCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATTCTGGATGGCGTCGTTAATTTTCGACATCAGGCCCATTTCGGTGGTCGGCGCCACCGTGCTGCGGGCGGCAAAACGCATc > 2:222807/1‑250 (MQ=255) cATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTAc < 1:517800/251‑1 (MQ=255) aTGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACg > 1:116298/1‑251 (MQ=255) atatTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGc > 1:372166/1‑249 (MQ=255) atatTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGc > 1:532207/1‑249 (MQ=255) atatTGCCAATGGTACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCTGCAAAACGCATCAGCTTGCGCAg < 2:285777/251‑1 (MQ=255) atTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCt > 1:542865/1‑251 (MQ=255) aTGTCACCGAACAATGTCGTCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCGCAGAGCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAgg < 2:504651/251‑1 (MQ=255) gtccccGAACAATGTCTGCATGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCCGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGTAGCTCATAAGGc < 2:307414/246‑1 (MQ=255) cACCGAACAATGTCGGCATGCTGAGCTGGCGATACGAC‑AAAACA‑GAATATGGGCGAACGCGGGCAGCGCCTCCGATCAGCACTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAAAGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACAACGGACACAGTTCGGTGGGCGCGGCAACCTTGCAGCAGACGACAAAACGCATCAGCTTACGCAGCTCCTAAGGCGTg > 2:397779/1‑251 (MQ=255) aaTGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGc > 1:32490/1‑251 (MQ=255) tGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGtcgc > 1:257491/1‑246 (MQ=255) cGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAAc < 1:555287/251‑1 (MQ=255) ggCAAGCTGTGCTGGCGCGACGAC‑AAAACA‑GCATATGTGCGAGAGAGGGCAGCGCCTAAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCAAGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGAGGGCGGCGTTAATTTTCGACATAGGAAACAGTTCGGTGGTCGTCGCAACCTTGCTGCGGGAGGCAAAACGCATCAGCTTACGAAGCTCATCAGGCGTGCAGGTAgaggaacc > 2:397612/1‑244 (MQ=255) ggCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCTACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCag > 2:162213/1‑249 (MQ=255) ggCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCag > 1:379371/1‑249 (MQ=255) gtgCTGGCGATACGAC‑AAAACC‑GAATATGTGCGCAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCCACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACTTCGGGAACAGTTAGGGGGTCGGCGCAACCTTACTGCGGGCGGCAAAACGCATCAGCTTCCGCAGCTCATAATACGTGCCGGTAGCAGCACCAGAGACGc > 2:240446/1‑251 (MQ=255) gtgCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGAc < 1:633350/249‑1 (MQ=255) gtaTACGAT‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCATCGCTGCTAATGATTTGCAATAATCGGCTTTCAACACCACTCGGTATCGCGCCTTACCGTCGCGCACATGCTGGATGGCGACGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCGCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATc < 2:329147/249‑1 (MQ=255) cgagaCGAC‑AAAACA‑GAATATGTGCGAAAGAGGTCAGCGCCTCAGATCAGCGTTGCGAATGATTTTCAATAATCGGCTTTCAACTCCACGCGGTAACGCGCCTTCCCGACGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGATCCAGAGACGCTGCTATc < 1:52000/247‑1 (MQ=255) aCGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGCCATCGGGAACAGTTCGGTGGTCGGCGCACCCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATACGGCGGGCCGGTAg > 2:424173/1‑225 (MQ=255) aCGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAg < 1:424173/225‑1 (MQ=255) gAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGgc > 1:255273/1‑162 (MQ=255) gAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGGCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGgc < 2:255273/162‑1 (MQ=255) atatGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTaa < 1:573990/251‑1 (MQ=255) gtgCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAgg < 1:218614/250‑1 (MQ=255) gggAAAGAGGGCAGGGCCGCCGATCATCGCTGCGAATGATTTTCAATAAGCGGCTTTCAACACCACGCGGTAACGCGCCTGACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTGCGGTGGTCGGCGCAACCTTGCTGCGGGAGGCAAAACGCATCAGCTTACGCAGCTCACAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTTAAGGcc < 2:200780/248‑1 (MQ=255) aaGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAac > 1:579717/1‑251 (MQ=255) ggCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACAGGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAacagaca < 1:431753/251‑1 (MQ=255) gCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAacagacag < 1:222807/251‑1 (MQ=255) cgcCTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAgcggc < 1:171521/251‑1 (MQ=255) cTCAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTACAGGCCGGAACAGACAGCGGCGTg > 2:411627/1‑251 (MQ=255) cAGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTCGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGAAAAGGCCGGAACAGACAGCGGCGTg > 1:27281/1‑249 (MQ=255) aGATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGGTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTgaga < 2:17992/251‑1 (MQ=255) gATCAGCGCTGCGAATGATTTTCAATAATCGGCTTTCAACACCACGCGGAAACGCGCCTTACCGTCGCGAACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAAAAGTTCGGTGGTCGGCGCACCCTTGCTGCGGGCGGCAAAAAGCATAAGCTTACGCAGCGCATAAGGCGTGCCGGTAGAAGAAACAGAGACGCTGCGATCGCCCGCAATTAACGAAAAGGCCGGAACAGAAAGCAGCGGgag > 2:357581/1‑249 (MQ=255) gcTGCGAATGATTTTCAATAATCGTCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGGCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCacc < 2:579717/251‑1 (MQ=255) tttCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCACCGACCGTATGGa > 1:44620/1‑250 (MQ=255) tttCAATAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCACCGACCGTATGGa > 1:566630/1‑250 (MQ=255) | AAACTATTCTCGCGCGAATGCAGCGTCGGGCTGGGCATTTTATGCCGGTAGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGAC‑AAAACA‑GAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGATTTTCAAAAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCACCGACCGTATGGA > NC_000913/4494951‑4495437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |