Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,336 A→G E201E (GAA→GAG thrC → threonine synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,3360AG94.5% 206.6 / 0.6 74E201E (GAA→GAGthrCthreonine synthase
Reads supporting (aligned to +/- strand):  ref base A (2/2);  new base G (32/37);  total (35/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01

ATTGCGGGTGATAAGCCAGTGACCATTCTGACCGCGACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGTTGCGCAGCTGCCGCAGGAGACGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTATTGCTGCGACCAACGTGAACGATACCGTGCCACGTTTCCTGC  >  NC_000913/4094‑4583
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                       
atTGCGGGCGATAAGCCAGTGACCATTCTGCCCGCGACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAgg                                                                                                                                                                                                                                                 >  1:368800/1‑250 (MQ=255)
   gCGGGCGATAAGCCAGTGACCATTCTGACCGCGACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGgc                                                                                                                                                                                                                                              <  1:98832/251‑1 (MQ=255)
      ggcgATAAGCCAGTGACCATTCTGACCGCAACCTCAGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGGGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGGGgcgcc                                                                                                                                                                                                                                           >  2:286116/4‑250 (MQ=255)
         gATAAGCCAGTGACCATTCTGACCGCGACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCtggg                                                                                                                                                                                                                                        >  2:325572/1‑248 (MQ=255)
                    gacaaTTCTGACCGCGACCTCCGGGGATAACGGAGTGGCAGTGGCTTATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCGCTAGCCACGAGGCAAAAACAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTca                                                                                                                                                                                                                              <  2:547929/246‑2 (MQ=255)
                    gACCATTCTGACCGCGACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTcag                                                                                                                                                                                                                             <  1:19743/251‑3 (MQ=255)
                    gACCATTCTGACCGCGACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTca                                                                                                                                                                                                                              <  1:491467/250‑2 (MQ=255)
                        aTTCTGACCGCGACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTaa                                                                                                                                                                                                                         <  1:259999/251‑1 (MQ=255)
                             gACCGCGACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTTAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGa                                                                                                                                                                                                                    <  1:467670/251‑1 (MQ=255)
                                cgcgACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTa                                                                                                                                                                                                                 <  1:190235/251‑1 (MQ=255)
                                          ggTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCg                                                                                                                                                                                                       >  1:316306/1‑251 (MQ=255)
                                           gtgcgaCCGGAGAGACAGTGGCTAATGCTTTCTACGGTTTACCGAATGGGAAAGAGGTTATCCTCTATACACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGTCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCgg                                                                                                                                                                                                      <  2:120943/246‑2 (MQ=255)
                                           gTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGACATATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCTGTTGATGATGAAGGGCTGACAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGt                                                                                                                                                                                                      >  2:364255/1‑251 (MQ=255)
                                                   ggAGCCGCAGGGGCTCATGCTTTCTACCGTTTACCGAAGGTGAAAGTGGTTATCCTGTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGGACATTGGGCGGCAATATCGAAACTTTGGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGTTGAGGCAGGCGTTTGATGATGAAGAGCTTAAAGTGTCGCTGGGGTTAATCACAGCTAACTCGCTTAACATGAGTCGTTTGCTGgc                                                                                                                                                                                              <  2:655131/251‑1 (MQ=255)
                                                       cGGCAGAGGCTCATGCTATCTACGGTTTACCGAATGTGCAAGTGGTTATACTCTATCCACGAGGCAAAATCAGTCCCCTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAAATGTTGCCATAGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCAGAAAGGGGCGCTGTGGTTAAACTCAACTAACTCGATTAACATCAGCTGTTTGCTGgcgac                                                                                                                                                                                           >  2:560991/1‑248 (MQ=255)
                                                        ggCAGTGGCTCATTATTTCTCCGGATTACCGAATGTGAAAGGGGTTATCCTCTATCCAAGCGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCAAAACTGTTGCAATAGACGGCGATTTAGATGACTGTCAGGCGCTGGAGAAGCAGGAGTTTAATGATGACGAGCTGAAAGGGGCGCTGGGGGTAAAATCCGCTAACTCGTTTAACAACAGCAGTTTGCGGGCGCAgg                                                                                                                                                                                         >  2:468910/1‑250 (MQ=255)
                                                           aGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGAttt                                                                                                                                                                                      <  1:325572/251‑1 (MQ=255)
                                                                           tACGGTTTACCGCATGTGAACGAGGTTATCCTCTATCCACGCGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGCTTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGCGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGCTTTGCTCCTACTTTGAAGc                                                                                                                                                                      >  2:503454/1‑251 (MQ=255)
                                                                            aCGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAg                                                                                                                                                                       <  1:262686/249‑1 (MQ=255)
                                                                            aCGGTTTACAAAAAGTGAAAGTGTTTAGCCTGTATCCACGAGGCAAATTCAATCCACTGCAAGCAATACTGTTCTGTACATTGGGCGGCAATATCGAACGTGATGCCACCGACGTCGATTTCGATGCCTGTCAGGCGCTGGTGGTGCAGGCGTTTGGTGATGAAGAACGAAAAGTGGCGCTAGGGTTCAACTCGGATAACTCGATTAAAATCAGCCTATCGCTGGCGCAGATGTGCTAAGACTTTGAAGcc                                                                                                                                                                     >  2:268457/1‑250 (MQ=255)
                                                                               gTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGtt                                                                                                                                                                  >  1:4511/1‑251 (MQ=255)
                                                                                tttACCGAATGTGAAAGTGGTTATCCGCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGtt                                                                                                                                                                  <  2:456319/250‑1 (MQ=255)
                                                                                      gAATGTGAAAGTGGTAATACTCTATCCACGAGGCAAAATCAGTCCAATGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGCAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGAAGGCGTTTGCTGATGAAGACCTGAAAGAGGCGCTAGGGTTAAACACGGCTAAATCGATTAAAAACAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGTTgcgc                                                                                                                                                              >  2:593325/1‑248 (MQ=255)
                                                                                         tgtgAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCCGCTAACTCGATTACCATCAGCCGTTTGCTGGCGCGGATTTGCTACTACTTTGAAGcag                                                                                                                                                                    >  2:418725/1‑237 (MQ=255)
                                                                                         tgtgAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGcag                                                                                                                                                                    <  1:418725/239‑3 (MQ=255)
                                                                                                               ccACGAGGCAAAATCATGCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCAGCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACAGCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCt                                                                                                                                  <  1:114863/251‑1 (MQ=255)
                                                                                                                       cAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAACGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGtct                                                                                                                          >  2:279846/1‑251 (MQ=255)
                                                                                                                       cAAAATCAGGCCCCTGAAAGAAAAACTGGTCTGTACATTGGGAGGCAATATCGAAACTGTTGCCACCGACGGCGATGTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAACTGAAAGTGTCACTAGGGTTAAAATCGGCTAACTCGATGAACATCAGCCGTTTGCTGGCGCAGATTTGCTCCTACTTGGAAGCTGTTGCGCGGCTGCCGCAGGAGACGCGCAACCAGCTGGTTGtct                                                                                                                          <  2:51029/251‑1 (MQ=255)
                                                                                                                           aTCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGt                                                                                                                      <  1:537250/251‑1 (MQ=255)
                                                                                                                              aGTCCACTGCAAGAAAAACTGTTCTGGACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGACAGTGGCGCTGGGGTTAAACTCAGCTCACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCATTTGCGCAGCGGCCGCAGAAAGCGCGCACCCACCTGGTTGtcgcgtgtcc                                                                                                                   >  2:581461/1‑243 (MQ=255)
                                                                                                                                       cAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGaa                                                                                                           >  1:539105/1‑250 (MQ=255)
                                                                                                                                       cAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCAGCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGaaa                                                                                                          <  1:286116/251‑1 (MQ=255)
                                                                                                                                        aaGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAAATCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAAc                                                                                                         >  1:379782/1‑251 (MQ=255)
                                                                                                                                         aGAACAACAGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCTATCAACGGCGCTTTCGATGTCTGACAAGCCCTGGTGAAGCAGACGCTTGATGATGCGGAGCTGAAAGGGGCGGTGGGGGTAAACTCAGCTAACTCGATTACCATCAGCGGTGTGCTGGCGCAGGTTGGATACTACTTTGAAGCAGTTGCGTCGCTCCCGCAGGAAGCGCACAACCAGCTGGATGTACCGGTGcccacaggaaact                                                                                                        >  2:13155/1‑240 (MQ=255)
                                                                                                                                         aGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACt                                                                                                        >  2:536611/1‑251 (MQ=255)
                                                                                                                                                cTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGCCGGCGATTTCGATGCCTGTAAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCgg                                                                                                 >  2:34376/1‑250 (MQ=255)
                                                                                                                                                        tACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGTGTTGAcgg                                                                                         >  2:372779/1‑251 (MQ=255)
                                                                                                                                                         aCATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGtc                                                                                                                           >  1:137070/1‑216 (MQ=255)
                                                                                                                                                         aCATTGGGCGGCAATATCGAAACTGTGGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGtc                                                                                                                           <  2:137070/216‑1 (MQ=255)
                                                                                                                                                          cATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGAcggcg                                                                                       >  1:397026/1‑251 (MQ=255)
                                                                                                                                                             tGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGt                                                                                                                      >  1:487639/1‑217 (MQ=255)
                                                                                                                                                              gggCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGt                                                                                    <  1:313348/250‑1 (MQ=255)
                                                                                                                                                              gggCGGCAATAACGAACCTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGTAGCAGGCGTTTGATGATGAAGAACTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACAGCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTc                                                                                   <  2:122206/251‑1 (MQ=255)
                                                                                                                                                                  ggcAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGACTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCACACGGAAACTTCGGCGATTTGCCGGCgggggtgtt                                                                               >  2:319302/1‑245 (MQ=255)
                                                                                                                                                                    cAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCCGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGCAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGt                                                                                                                                                                   >  1:645176/1‑165 (MQ=255)
                                                                                                                                                                    cAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATAAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGtacgctgg                                                                             >  1:380436/1‑244 (MQ=255)
                                                                                                                                                                       tatCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTggggg                                                                          >  1:393309/1‑248 (MQ=255)
                                                                                                                                                                                 gTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCg                                                                 <  1:104744/250‑1 (MQ=255)
                                                                                                                                                                                    gCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCt                                                             <  1:536611/251‑1 (MQ=255)
                                                                                                                                                                                     ccatggccggagagttcggggCCTGTCAGGCGCTGTTGAAGCGTGCGTTTGAGGAGAGAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACGCGAGTAACTTCAGCCGTTGGCTGGCGCAGATTTGCTACTACTTTGAAGCTGTTGCGCAGCTGCCTCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGGCACTCGGTCTg                                                            <  2:588811/231‑1 (MQ=255)
                                                                                                                                                                                     ccATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGGAGGAGTTTGATGATGAAGAGCTGAAAGTGGCGATGGGGTTAAACTCAGCTAACTCGATTAAAATCAGCCGTTTGCTGGCGCAGAAGTGCTACTACTTTAAAGAAGTTGCGAAGATGCAGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAACATTCGGCGATTTGACGGCGGGActgtgggcgggagggacaggggtg                                                            >  2:659677/1‑230 (MQ=255)
                                                                                                                                                                                     ccATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCCGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCCGGtgggctgggggaggaccgtggatgg                                                            >  2:514265/1‑227 (MQ=255)
                                                                                                                                                                                     ccATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCg                                                                                                              >  1:452215/1‑201 (MQ=255)
                                                                                                                                                                                     ccATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCg                                                                                                              <  2:452215/201‑1 (MQ=255)
                                                                                                                                                                                       aTCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACAGCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGcc                                                          <  1:245566/251‑1 (MQ=255)
                                                                                                                                                                                       aTCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGTTGCGCAGCTGCCGCAGGAGACGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGGCGGCTGGCggcgacaacccgcgcggc                                                          >  2:312113/1‑234 (MQ=255)
                                                                                                                                                                                          gACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGtt                                                                                                                                                                  >  1:146957/1‑144 (MQ=255)
                                                                                                                                                                                          gACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGtt                                                                                                                                                                  <  2:146957/144‑1 (MQ=255)
                                                                                                                                                                                           aCGGCGATTTCGATTCCTGTCAGGCGCTGGTGAAGCAGGCGGTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTg                                                      <  1:330595/251‑1 (MQ=255)
                                                                                                                                                                                            gggCGATTTGAATGCCTGTCAGGCGTGGGTTAAGCAGGCGTTGGAGGAGGAAGAGCGTAAAGTGGCGCTGGGTTTAAACTCAGCTAACGCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGa                                                     <  2:314301/250‑1 (MQ=255)
                                                                                                                                                                                            cGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTg                                                                                                                     >  1:401063/1‑187 (MQ=255)
                                                                                                                                                                                            cGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTGGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTg                                                                                                                     <  2:401063/187‑1 (MQ=255)
                                                                                                                                                                                             ggCGATTTCGATGCCTGTCAGGCGCTGGCGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGTGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAAACAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGaa                                                    <  1:259989/251‑1 (MQ=255)
                                                                                                                                                                                               cGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGGATGCTGGCggaggtccaccgtctgccggggaga                                                   >  1:232509/1‑226 (MQ=255)
                                                                                                                                                                                                 aTTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGt                                                <  1:617040/251‑1 (MQ=255)
                                                                                                                                                                                                    tCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGttt                                              <  1:431307/250‑1 (MQ=255)
                                                                                                                                                                                                          ccTGGCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACGCAGCTAAGCCGATGAACATCAGCCGGTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCTATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTATtgct                                       <  2:397026/251‑1 (MQ=255)
                                                                                                                                                                                                               cAGGCGCTGGTGAAGCAGGCGGTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTATTGCTGCGAc                                  <  2:316306/251‑1 (MQ=255)
                                                                                                                                                                                                                         ggagaccggCGTTTGATGATGAAGAGCTGAAAGGGGCGCTGGGGTAAAACTAAGCTAACTCGATTAACAACAGCGGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTATTGCTGCGACCAGCGTGAAc                        <  2:4511/244‑1 (MQ=255)
                                                                                                                                                                                                                               aGGCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGTTTAAACTCAGCTAACTCGCTTAACATCGGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCACCCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGGCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTa                                            <  2:542452/225‑1 (MQ=255)
                                                                                                                                                                                                                                ggCGTTTGATGATGAAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTATTGCTGCGACCAACGTGAACGATACCg                 <  1:268960/251‑1 (MQ=255)
                                                                                                                                                                                                                                      tgatgatgaAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTTTTTCTGCGACCAACGTGAACGATACCGTGcccc           >  1:193019/1‑249 (MQ=255)
                                                                                                                                                                                                                                         ggatgaAGAGCTGAAAGTGGCGCTGGGGTTAAACTCAGCTAACTCGATTAACAGCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCTGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTct                                                                                  <  2:19485/176‑1 (MQ=255)
                                                                                                                                                                                                                                          gatgaAGAGCTGAAAGTGGCGCTGGGGTTAAACCCAGCTAACTCGATTAACAGCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCAGTTGCGCAGCGGCCGCAGGAAGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTATTGCTGCGACCAACGTGAACGATACCGTGCCACGttt       <  2:193019/251‑1 (MQ=255)
                                                                                                                                                                                                                                                agaaCTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGTTGCGCAGCTGCCGCAGGAGACGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTATTGCTGCGACCAACGTGAACGATACCGTGCCACGTTTCCTGc  <  1:312113/251‑1 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                       
ATTGCGGGTGATAAGCCAGTGACCATTCTGACCGCGACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGTTGCGCAGCTGCCGCAGGAGACGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTATTGCTGCGACCAACGTGAACGATACCGTGCCACGTTTCCTGC  >  NC_000913/4094‑4583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: