| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,306,035 | C→T | G188D (GGC→GAC) | yjcS ← | linear primary‑alkylsulfatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,306,035 | 0 | C | T | 94.3% | 196.3 / 0.7 | 73 | G188D (GGC→GAC) | yjcS | linear primary‑alkylsulfatase |
| Reads supporting (aligned to +/- strand): ref base C (1/3); new base T (38/28); total (39/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.19e-01 | |||||||||||
GACGATAGTTTTCGTCGGTGCAATAATGCTCGGGTCGCCCGTTGCCAGCGTCAC‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGCCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTATCGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACT > NC_000913/4305791‑4306272 | ggcgatatgtttggggggTGCAATAAGGTTGGGTTCGCCCGTTGCCAGCGTCAC‑TCCAAGACCATTCCCCCCTTTGCCTGGCGGTTTGGGGGGCGGAAACAGACCGTAAGAGTGGCGCGCAGTGCGCCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGtcac < 2:658137/232‑1 (MQ=255) gATAGTTTTCGTCGGTGCAATAATGCTCGGGTCGCCCGTTGCCAGCGTCAC‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAgg > 1:661379/1‑250 (MQ=255) gTTTTCGTCGGTGCAATAATGCTCGGGTCGCCCGTTGCCAGCGTCAC‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTc > 1:500333/1‑251 (MQ=255) ttttCGACGGTGCAATAATGCTCGGGTCGCCCGTTGCCAGCGTCAC‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGCTAATGCCTTTCACGTCACCATAGTTGTCg > 2:283209/1‑251 (MQ=255) cgtcgATGCAATAATGCTCGGGTCGCCCGTTGCCAGCGTCAC‑GCCAAGGCCATTACCCTCATTGCCTTGCACGTTGCGCTGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACATTTTCGCTGATGGCTTCGGACCTCAAGCCTGCAGGGGAAATCCCCTGAACTTTGCCGGATTTACCCTCTGCTTCACGGTGAATGCCTTTCACGTCACCATaagggacggggt > 2:514004/1‑240 (MQ=255) cgGTGCAATAATGCTCGGGTCGCCCGTTGCCAGCGTCAC‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGc > 1:162613/1‑251 (MQ=255) ggTGCAATAATGCTCGGGTCGCCCGTTGCCAGCGTCAC‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑TCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCt < 1:213522/251‑1 (MQ=255) gaaataatGCTCGGGCCGCCCTTTGCCAGCGCCAC‑GCCAAGGCCTTTCCCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGTTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCtgtg < 1:233732/249‑1 (MQ=255) cTCGGGTCGCCCGTTGCCAGCGTCAC‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTgtgtgtgt > 1:381815/1‑247 (MQ=255) ggTCGCCCGTTGCCAGCGTCAC‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACg > 1:678145/1‑251 (MQ=255) ggTCGCCCGTTGCCAGCGTCAA‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGCCCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGCTGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATACAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTACACGTCACCATAGTGGTCGGTGTGGCTGTGAgttgagtttgcg > 2:295604/1‑241 (MQ=255) gCCCGTTGCCAGCGTCAC‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGACGGTGTGGCtggggggggagttaacggca > 2:55213/1‑232 (MQ=255) cccGTTGCCAG‑GTCCCCGCCAGGGCCATTACCCACATTGCCTGGCGCGTTGGGCGGCAGAAACAGACCGTAAGAGTAGAGCGCACGGGGGCTCT‑TGATGTT‑C‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGcaac < 1:463288/251‑1 (MQ=255) ttGCCAGAGCCAC‑GTCAAGGCCATTACCCACATTGCCTTGCGCATTGTGCGGCAGTAACCGACCGTAAGAGCAGATCGCACGGCGCCTCA‑TGATGTT‑C‑CCCGACAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGACTGCAGGGGCAATCACCTGAACTTTGCAGGATTTAACATCGGCCTCACAGATAATGCCTTTACCGTCACCATCGTGGTCGGTGTGGCTGTGAGAGTAGTTAACGGcacccca > 2:81237/1‑245 (MQ=255) cAGCGTCAC‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTACCAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGGGGGAGTAGGTAACCGCAAAAAACGGtt > 2:332364/1‑251 (MQ=255) cAGCGACAC‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCGGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGAGAAGGCCTTTCACGTAACCATAGTGGTCGGTGTGGCTGGGGATGTAAATAACGGCAAAAATCGGtt > 2:152768/1‑251 (MQ=255) gCGTCAC‑TCCAAGGCCTTTACCCACATTGCCGTGCGCGTTGGGCGGCAGTAACAGACCGTAAGGGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCAGAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGtttt < 1:567662/251‑1 (MQ=255) cAC‑GCCAATGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTCACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGTGGCAATCACCTGCACTTTGCCGGATTTAACATCGGCTTCTGGGGTCATTCCTTTCACGTCACCATAGTGGTCGGTGAGGCTGGGTGTTTAGATAACGGCAACCATCCGTTTTTg > 2:20304/1‑249 (MQ=255) aaGGCCATTACACACATTGCCTTGCGCGTTGTGCGGCAGTAACAGGACGAAAAAGTAGAGCGCAAGGCGGCTCA‑TGATGTT‑A‑CACGCAAGCACGTTTTCGATGATTGCTGCGTCCATAAAGCCTGCGGGGTCAATCACCTGTAATTTGCCGGATTTAACATCTGCTTCGGAGATAATGCCTTTCCCGTCGACATAGGGGTCGGTGTGGCTGAGAGTAGAGAAAGCGGCATCAATCGGgtttgtcaggcgat > 2:615995/1‑241 (MQ=255) aGGCCATTACCCACATTGCCTTGCGCGTTGGGCGGCAGTAACAGACCGTAAGGGGAGAGCGCCCGGCGTCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATg < 1:360453/251‑1 (MQ=255) aGGCCATTACCAACGTGGCCTGGCGCGTGGTGCGGCAGTAACAGACCGTAAGAGTATATCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCGGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATg < 1:615995/251‑1 (MQ=255) ccATTACCCACATTGCCTTGCGCGTTGGGCGGAAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTg < 1:168100/251‑1 (MQ=255) ttACCCACATTGCCTTGCGCGTTGAGCGGCAGTAACAGCCCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCCCCTGAAATTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCAAGTCACCATAGTGGTCGGCGTGGCTGTGAGTGTAGATAAAGGCACCAATCGGTTTTTGCGGACGATGCTGGa > 2:323196/1‑250 (MQ=255) aCCCACATTGCCGTGCGGGTTGTGCGGCAGTAACAGCCCGTAAGAGTAGAGCGCACGTGGGCTCA‑TGATGTT‑C‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAg < 1:580231/250‑1 (MQ=255) ataTTGCCTTGCGCGTTGGGCGGCTTTAACAGCCCAAAAGAATAGAGCGCTCGGCGGTCCA‑TG‑GGTT‑ATCCCGCCAGCACGTTTTCGCTGATGGCTTCTTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGGCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAg < 2:549239/249‑1 (MQ=255) caTTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAgg > 1:239761/1‑251 (MQ=255) ccTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCa > 1:113493/1‑249 (MQ=255) gCAGTAACAGACCGTAAGCGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATCAAGCCTGCAGGGGCAATCCCCTGCACTTTGCCGGTTTTAACATCGGCTTCAGAGATAATGCCCTTCACGTCACCATAGGGGTCGGTGTGGCTGTGAGTGTCGATAACGGCACCAATCGGTTTTTGCGGACGATGCTGGACGTACAGGTCAAGAGCGGCTTTTGCgtc > 1:431047/1‑248 (MQ=255) atgatcagacagaaggtggggagCGCCCGGTGGCTCG‑TG‑TGTTCA‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGACTTAACATCGGCTTCAGAGATAATGCCTTTCGCGCCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAgg < 2:195812/231‑1 (MQ=255) aGACCGTCAGAGTAGAGCGCCCGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGATTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGTTAATGCCTTTAACGTCACCATCGTGGTCGGAGTGGCGGTGAGTGTAAGTAACGGGAACCATCGGTTTTTGCAGACAATACTGGCATGAAAGGGCACGTGCGGCTTTTGCGACAgggtgagt > 2:680086/1‑245 (MQ=255) gACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATGATGCCTTTCACGTCACCATAGAGGTCGGTGTGGCTGTGAGGGGAGATACCGGCAACAATCGGTTTTTGCGGACGATGCTGGACGTAAAGGTCAAGTGCGGCTTTTGCGGccggggggggc > 2:167992/1‑241 (MQ=255) ccgaaagaggggggcgccgggcggcTCAGTG‑TGTG‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGGCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGCCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGGGGCGTCAc < 2:341804/232‑1 (MQ=255) tAAGAGTAGAGCGCCCGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGCGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTAAAGTGCGGCTTTTGCGGCAGGCGGCCTCAcc > 1:517344/1‑249 (MQ=255) tAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGAt > 2:419251/1‑167 (MQ=255) aagagCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGAt < 1:419251/166‑1 (MQ=255) gcACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAAc > 1:66573/1‑251 (MQ=255) ggcggcTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCCGGTCG‑ATAACaat > 1:253666/1‑250 (MQ=255) ggcTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAgg < 1:500898/197‑1 (MQ=255) ggcTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAgg > 2:500898/1‑197 (MQ=255) a‑tgatgTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCttt < 1:20304/251‑1 (MQ=255) gtttgt‑A‑CCCGCCCGCGCGTTGTCGCGGATGGCTCCTTCCATAACGCTGGCAGTGGCAATGCCCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGTTACTGCCTTTCACGTCACCATAGGTGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTtc < 2:321536/245‑1 (MQ=255) ttttccccGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATAACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTtctc < 2:500333/245‑1 (MQ=255) taccccGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGc < 2:162613/247‑1 (MQ=255) gCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGGGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGGCG‑CTAACAATAATGCCCTTTTCGCCCTCaac > 1:601345/1‑251 (MQ=255) gCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCaacgaac < 1:195630/251‑1 (MQ=255) gTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCCGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCCACGAACGTa > 1:618395/1‑250 (MQ=255) cGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGAGCGGCTTTTGCGGCAGGGGGCGTCACCCGCGGGTCG‑GTAACAATAATACCTTTCTAGCCCCCAACGAACGTAAAGttt > 1:315904/1‑250 (MQ=255) cGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGAGAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTa < 1:514004/251‑1 (MQ=255) gCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGACCTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGCCACCATAGTGGTCGGTGTGGCTGTGAGTGTAgg > 2:288684/1‑121 (MQ=255) gCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGGCG‑GTAAAAATAATGCCTTTCTCGCCCTCCACGAACGTAATGTTa > 1:663260/1‑250 (MQ=255) gCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGCCACCATAGTGGTCGGTGTGGCTGTGAGTGgaga < 1:288684/122‑1 (MQ=255) aTGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGat < 1:283209/251‑1 (MQ=255) tGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAAt > 1:420652/1‑130 (MQ=255) tGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCGGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAAt < 2:420652/130‑1 (MQ=255) ggCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACGTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGGCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTGTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGatat < 1:567699/251‑1 (MQ=255) ttCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGatatact > 1:598803/1‑248 (MQ=255) ccttAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACAGCTGCTTCAGAGATAATGCCTTTCACGTCCCCATAGTGGACGGTGTGGCTGGGAGTGTAGATAACGGAAACAACCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCGTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAAGGCCTTTCTCGCCCCCAACGAACGTAATGTTAGAGATATCCTGGc < 2:455716/246‑1 (MQ=255) aTAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTg > 1:177506/1‑128 (MQ=255) aTAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTg < 2:177506/128‑1 (MQ=255) tAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAACGGGTCGGATA‑CCATAATGCCTTTCTCGCCCTCAACGGACTTACTTTTAGAGATGTCCTGGCCgcgc > 1:651334/1‑251 (MQ=255) gCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCGGGCCGCGCACCTGa < 2:661379/249‑1 (MQ=255) gCAGGGGCAATAACCTGAACTTTGCCGGATTTAACAGCGGCGTCAGAGATAATGCCGTTCACGTCACCAGAGTGGGCGGTGGGGCTGTGAGTGTAGATAACGGCAACAATCGGTTGTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGa < 2:352896/249‑1 (MQ=255) ggtcAATCATCGGAACTTTGCCGGATTTAACAGCGGCTTTAGAGAGAATGCCTTTCACGTCACCATAGTGGGCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGGCGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGGCG‑ATAACAATAATGCCTTTCTCTCCCGCAACGAACGTAATGTTAGAGATATCCTGCCCGCGCACCGGATACAtt < 2:51847/248‑1 (MQ=255) aTCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTATc < 1:185868/251‑1 (MQ=255) aCCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTATCGGt < 1:173452/251‑1 (MQ=255) gAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTATCGGTGACt < 2:663260/251‑1 (MQ=255) cGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCCACGACCGTGATGTTAGAGATATCCTTGCCGCGCACCTGATACATTTTTTCGGTGACTTTTAACAgg > 1:185812/1‑251 (MQ=255) cATCGGCTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑CTAACAATAATGCCTTTCTCGCCCTCAACGCACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACAt > 1:473402/1‑220 (MQ=255) cATCGGCTCCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGGAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACAt < 2:473402/220‑1 (MQ=255) cTTCAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTATCGGTGACTTTGAACAGGCCAGCAATACCGTTg > 1:30448/1‑251 (MQ=255) cAGAGATAATGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTATCGGTGACTTTGAACAGGCCAGAAATACCGTTGAt < 1:268833/250‑1 (MQ=255) aaTGCCTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTATCGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACt > 1:415481/1‑251 (MQ=255) cTTTCACGTCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCCCCAGCGGGGCG‑GTAACAATAATGCCTTTCTCGCCCCCAACGAACGGAATGTTAGAGATATCCTGGCCgcgc > 1:256544/1‑188 (MQ=255) cTTTCACGGCACCATAGTGGTCGGTGTGGCTGGGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCgcgc < 2:256544/188‑1 (MQ=255) | GACGATAGTTTTCGTCGGTGCAATAATGCTCGGGTCGCCCGTTGCCAGCGTCAC‑GCCAAGGCCATTACCCACATTGCCTTGCGCGTTGTGCGGCAGTAACAGACCGTAAGAGTAGAGCGCACGGCGGCTCA‑TGATGTT‑A‑CCCGCCAGCACGTTTTCGCTGATGGCTTCGTCCATAAAGCCTGCAGGGGCAATCACCTGAACTTTGCCGGATTTAACATCGGCTTCAGAGATAATGCCTTTCACGCCACCATAGTGGTCGGTGTGGCTGTGAGTGTAGATAACGGCAACAATCGGTTTTTGCGGACGATGCTGGAAGTAAAGGTCAAGTGCGGCTTTTGCGGCAGGCGGCGTCACCAGCGGGTCG‑ATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTATCGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACT > NC_000913/4305791‑4306272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |