| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,285,238 | G→A | intergenic (‑25/+175) | yjcH ← / ← acs | DUF485 domain‑containing inner membrane protein YjcH/acetyl‑CoA synthetase (AMP‑forming) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,285,238 | 0 | G | A | 96.9% | 191.2 / ‑1.8 | 66 | intergenic (‑25/+175) | yjcH/acs | DUF485 domain‑containing inner membrane protein YjcH/acetyl‑CoA synthetase (AMP‑forming) |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (33/30); total (35/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.16e-01 | |||||||||||
ATCACAATCACTCCAACACCAATTGGAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAGGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCG > NC_000913/4284993‑4285483 | atcccaatccacccAACGCCAATTTGAATCCCGCGGGTTACGCTTGTGTTAGGATTCAGCGGCGTGTCCAACCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCAGGTATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTGCTAT‑CCGCTTATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGAtt < 2:425005/239‑1 (MQ=255)aTCACAATCACTCCAACACCAATTGGAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGAtt > 1:257155/1‑251 (MQ=255) tcaATCACTCCAACACCAATTGGAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGTTATAAACTGCCAGCATAATAATCGACAGGATGGTGGGAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATATATAATGCCATTCACAACAGTTTCTCCTAAGGTAATGAAAGGATTGtt > 2:470615/2‑251 (MQ=255) acaACCACTCCAACACCAATTCGAATACCGCGTGTGCCGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTAGACTAACTCCCTGAAATGCGCATTGTTTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGtt < 1:673611/251‑1 (MQ=255) atacACTCCAACACCAATGGGAATACCGCGTGTGGCGCTGGTGTCCGGATTCAGCGGCGTGCCCAGCCAGCCGTGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCAGCACAGATTCTCCAGAGGTAATGTAAGGATTGtttt < 2:673568/248‑1 (MQ=255) cAACACCAATTGGAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCg > 1:534822/1‑251 (MQ=255) aaCACCAATTGGAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCCGCCGGGCGCGAAGGCGATCCGTAAAATAAAGCCGATATAACCTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGGTGCCGTTTTTCGACTAACTCCCTGAGATGCGCGTTGTCTTCTAT‑CCGCTGATAAATAGGGCCCATCATCACAAATTCTCCAGGGGTAATGTACGGATTGTTTTAATTCACGc > 2:275733/1‑251 (MQ=255) aatgggAATACCGCGTGTGACGCTGGTTTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCtt < 2:663844/247‑1 (MQ=255) aaTTGGAATACCGCGAGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGAGGCAAACCGTTACCGTTTTTCGACTAACACACTGAAATGCGCATTGTCTTC‑ATGCCGCTGTTAAAAAGTGCCATTCATCACCGATTCTCCCGAGGTATTGTAAGGATTGTTTTAATTCCCGCTCCCtt > 2:237448/1‑251 (MQ=255) gAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTTCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCGGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATggg < 1:674366/251‑1 (MQ=255) aaTACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGGTCAGTAAAATAAAGCCGCTATAAACTGCCAGCATAATAATCGGCAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGAGCATTGTCTTCTAT‑CAGCTGATAAATAGTGCCATTCATCACAGATTCTCCTGGGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATggg > 2:27940/1‑250 (MQ=255) cgTGGGACGCTGGTGTTCGGAGTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGtt < 1:495028/251‑1 (MQ=255) ggtgtcGCTGGTGGTCGGATTAAGCGGCGTGCGAAGCCAGGCGGGCGCGAAGGCGATCAGTAAAATAAAGTCGATATAAACTGCCAGCATAATAAGCGACAGGAGGGGGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCAGTGTCTTCTAT‑CCGCTGATAAATAGTGTCATGCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTaa < 2:94367/246‑1 (MQ=255) ggACGCGGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGGGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGGCTTCTAG‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACg < 2:175669/250‑1 (MQ=255) cgaatgcagaggccgtcccATCCAGCCGTGCGCGAAGGCGATCATTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTTGCAATCCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTATCGCTCGGTTAAccc < 2:640834/234‑1 (MQ=255) ccagccGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATaa < 1:90625/251‑1 (MQ=255) cgcgAAGGCGATCAGTAAA‑TAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAGGGATTGTTTTAATTCCCGCTCCCT‑ATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTAcgc > 1:347695/1‑251 (MQ=255) gCGATCAGTAAA‑TAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAGGGATTGTTTTAATTCCCGCTCCCT‑ATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATcc < 2:347695/251‑1 (MQ=255) gATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATcc < 1:111775/251‑1 (MQ=255) taGTAAAATAAAGCCGATATAACCTGCCAGCATAATAATCGCCAGGATAGGGGCAAACCGTTTACGTTTTTCGACTAACTCCCTGAAAAGAGCATTGTCTACTAT‑ACGCTGCTACATAGTGCCATTCATCACAGATTCTCCCGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGATCACGCTCGGGGATCCCTTACCGAATGTAGGCAGGATAAGGCGTATAcgccgctgcaggc > 2:572967/2‑244 (MQ=255) gTAAAATAAAGCCGATATAACCTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGACGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGca > 2:51801/1‑250 (MQ=255) tAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGcaat > 1:621607/1‑251 (MQ=255) tAAAATAAAGAAGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGCGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGAGTTTACGCCGCATCCGGcact > 2:448270/1‑249 (MQ=255) aaTAAAGCCGTTATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGAATAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAACTAGTGCCATTCATCACAGTTTCTCCAGCGGTAATGCAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGTGAACCCTTGCCGTATGTAGGCCGGATAAGGCGTTTCCGCAGCCTCCgccactca > 2:362982/1‑243 (MQ=255) aaaCTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACg > 1:110559/1‑251 (MQ=255) aCTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg > 1:43930/1‑228 (MQ=255) aCTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCt < 1:448771/251‑1 (MQ=255) aCTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCGCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg < 2:43930/228‑1 (MQ=255) cAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCATTGCCTGATGCGACGCTGTcgc > 1:471204/1‑251 (MQ=255) ataataATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCt > 1:191697/1‑251 (MQ=255) ataataATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACACTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGTTGCGACGCTGTCGCGtat > 1:454930/1‑249 (MQ=255) cGACAGGATGGTGGCAACCCGTTGCCGTTTTTCGACGAACTCCCGGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAgg < 2:189685/250‑1 (MQ=255) ggCAAACCGTTGCCTTGTTTCGACAAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCGCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGGAACCCTTGCCGAATGTAGGCCGGATTAGGCGTTTACGCCGCAGCCGGCAATCAATTCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACTAACCGtt < 2:378477/251‑1 (MQ=255) gCAAACCGTTGCCGTTTTTCGACTCACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGtt > 1:609842/1‑250 (MQ=255) gTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCg > 2:474046/1‑251 (MQ=255) ttttCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTACCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGCTAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGAGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCggg > 2:543818/1‑251 (MQ=255) agcccTGAAATGCGCAATGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGGAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTGAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCAGGCAATTGTGGGt < 2:158999/249‑1 (MQ=255) ccTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTAc > 1:261163/1‑251 (MQ=255) tGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACg > 1:65419/1‑250 (MQ=255) gAAATGCGCTTTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCGGATGCGACGCTGTCGCGGCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAAGTGTGGGTTACGAt < 2:621607/251‑1 (MQ=255) gAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGAt < 1:58145/251‑1 (MQ=255) aaaTGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACAGTTACCGACTCGCATCGGGCCATTGTGGGTTACGATg > 2:6325/1‑251 (MQ=255) aaTGCGCATTGGCTTCTAT‑ACGCTGATAACTAGTGCCATTCATCAAAGATTCTCACGAGGTACTGTAAGGATTGTTTTAATTCCCGCACCCTTATGGGCGAAGGTTAACGCTAGGGTAACAATTGCCGAACGTCGGCCGGATAAGGCGTTTCCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGCCGCGTCTTATCAAGCCTACAAACAGTTACCGACTCGCCTCGGGAAAtttaggtgagcggtgg > 2:87710/1‑237 (MQ=19) ggtatctAT‑CCGCTGAGAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGGGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATa < 2:555248/247‑1 (MQ=255) tctAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCt > 1:269095/1‑251 (MQ=255) tAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGc > 1:260191/1‑251 (MQ=255) aT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTg < 1:445412/249‑1 (MQ=255) cccGCTTATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCtt < 1:58022/250‑1 (MQ=255) cccGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCtt < 1:6325/250‑1 (MQ=255) gCTGATAAATAGTGCCATTCACCTCAGATTCGACAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACTCAATGCCTGATGCGTCGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGTCTCGCATCGGGCAATTGTGGGTTACGATGGCAACGCGATAGCCTGCTtctc < 2:411086/251‑1 (MQ=255) tGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGATACAGACTCGCCTCGGGCAATTGTGGGTTACGATGGCATAGCGATAGCCTGCTTCTCtt > 2:559153/1‑251 (MQ=255) aTAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTc > 1:653285/1‑250 (MQ=255) aaTAGTGCCATTCATCACCGATTCTCCAGAGGTAATGTAAGGCTTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATACCTGATGCGACGCTGTCGCGTCTTATCATGCCTACAAACCGTCACCGCCTCGCATCTGGCACTTGTCGGTTACGATGGCTTCGCGTTAGCCTGCTTCTCTTCa > 2:584166/1‑248 (MQ=255) gCCATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTtc < 1:448270/251‑1 (MQ=255) cATTCATCACAGATTCTCCAGAGGTAATGTAAGGATTGTATTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGGCGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGCTAGCCTGCTTCTCTTCCAGCTGCTgctc > 2:246266/1‑251 (MQ=39) atcaCAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTACCCCTTGCCGAATGTAGGCAGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAAGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCAACGCGATAGCCTGCTTCTCTTCAAGACGCTTCTCgcct > 2:284013/1‑247 (MQ=39) atcaCAGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACt > 1:468505/1‑250 (MQ=255) cacaGATTCTCCAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGAGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACg < 1:79292/251‑1 (MQ=255) ttCTCCAGAGGTAATGAAAGGATTGTTTTAATTCCCGCTCCCTTATGGGCGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTAAGATGGCATCGCTATAGCCTGCTTCTCTTCAAGCAGCTTCTAGAATACGCCAgg > 2:119496/1‑250 (MQ=38) cccAGAGGGTATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTGAACGCTCGGGTAACCCTTGCCGAAGGGAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCg < 2:282987/250‑1 (MQ=255) ccAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGAt < 1:474046/248‑1 (MQ=255) ccAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATc < 1:66771/249‑1 (MQ=255) cAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTAc < 2:604200/192‑1 (MQ=255) cAGAGGTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTAc > 1:604200/1‑192 (MQ=255) gTAATGTAAGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCg > 1:19058/1‑251 (MQ=255) aTGTAAGGATTGTTTTAATTCCCGCTCCCTTATTGGAGAAGGATAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGATTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAAGTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGTCAGTATCGGCAAGCGTCg < 1:466376/251‑1 (MQ=38) | ATCACAATCACTCCAACACCAATTGGAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT‑CCGCTGATAAATAGTGCCATTCATCACAGATTCTCCAGAGGTAATGTAGGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCG > NC_000913/4284993‑4285483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |